RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
SH3TC1-220ENST00000511002 IBTKQ9P2D0 1353 aaPredicted RBP20■□□□□ 0.79
SH3TC1-220ENST00000511002 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
SH3TC1-220ENST00000511002 MASTLQ96GX5 879 aa20■□□□□ 0.79
SH3TC1-220ENST00000511002 RNF181Q9P0P0 153 aa20■□□□□ 0.79
SH3TC1-220ENST00000511002 FER1L6Q2WGJ9 1857 aa20■□□□□ 0.79
SH3TC1-220ENST00000511002 GTF2E1P29083 439 aaPredicted RBP19.99■□□□□ 0.79
SH3TC1-220ENST00000511002 C3orf67Q6ZVT6 689 aa19.99■□□□□ 0.79
SH3TC1-220ENST00000511002 DBF4Q9UBU7 674 aaPredicted RBP19.99■□□□□ 0.79
SH3TC1-220ENST00000511002 TCERG1O14776 1098 aaKnown RBP19.98■□□□□ 0.79
SH3TC1-220ENST00000511002 VAMP4O75379 141 aa19.98■□□□□ 0.79
SH3TC1-220ENST00000511002 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
SH3TC1-220ENST00000511002 CNKSR1Q969H4 720 aa19.98■□□□□ 0.79
SH3TC1-220ENST00000511002 NYXQ9GZU5 481 aa19.98■□□□□ 0.79
SH3TC1-220ENST00000511002 PHAXQ9H814 394 aaKnown RBP19.98■□□□□ 0.79
SH3TC1-220ENST00000511002 NPR1P16066 1061 aa19.97■□□□□ 0.79
SH3TC1-220ENST00000511002 OLFM4Q6UX06 510 aa19.97■□□□□ 0.79
SH3TC1-220ENST00000511002 NLRP10Q86W26 655 aa19.97■□□□□ 0.79
SH3TC1-220ENST00000511002 SYNE4Q8N205 404 aa19.97■□□□□ 0.79
SH3TC1-220ENST00000511002 GPBP1L1Q9HC44 474 aaPredicted RBP19.97■□□□□ 0.79
SH3TC1-220ENST00000511002 CACNA1FO60840 1977 aa19.97■□□□□ 0.79
SH3TC1-220ENST00000511002 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
SH3TC1-220ENST00000511002 CRY2Q49AN0 593 aa19.96■□□□□ 0.79
SH3TC1-220ENST00000511002 PARP10Q53GL7 1025 aa19.96■□□□□ 0.79
SH3TC1-220ENST00000511002 PLBD2Q8NHP8 589 aa19.96■□□□□ 0.79
SH3TC1-220ENST00000511002 C7orf43Q8WVR3 580 aa19.96■□□□□ 0.79
SH3TC1-220ENST00000511002 RIC1Q4ADV7 1423 aa19.95■□□□□ 0.78
SH3TC1-220ENST00000511002 CCDC30Q5VVM6 783 aa19.95■□□□□ 0.78
SH3TC1-220ENST00000511002 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
SH3TC1-220ENST00000511002 LAMB2P55268 1798 aa19.95■□□□□ 0.78
SH3TC1-220ENST00000511002 TIAM2Q8IVF5 1701 aa19.94■□□□□ 0.78
SH3TC1-220ENST00000511002 ANKRD13DQ6ZTN6 518 aa19.94■□□□□ 0.78
SH3TC1-220ENST00000511002 PPP1R42Q7Z4L9 355 aa19.94■□□□□ 0.78
SH3TC1-220ENST00000511002 UTP14AQ9BVJ6 771 aaKnown RBP19.94■□□□□ 0.78
SH3TC1-220ENST00000511002 ATP5J2-PTCD1G3V325 749 aa19.93■□□□□ 0.78
SH3TC1-220ENST00000511002 LMNB1P20700 586 aa19.93■□□□□ 0.78
SH3TC1-220ENST00000511002 HSP90AB3PQ58FF7 597 aa19.93■□□□□ 0.78
SH3TC1-220ENST00000511002 KIF3CO14782 793 aa19.92■□□□□ 0.78
SH3TC1-220ENST00000511002 C1QTNF8P60827 252 aa19.92■□□□□ 0.78
SH3TC1-220ENST00000511002 ISCA1Q9BUE6 129 aa19.92■□□□□ 0.78
SH3TC1-220ENST00000511002 STK31Q9BXU1 1019 aa19.92■□□□□ 0.78
SH3TC1-220ENST00000511002 NMRK2Q9NPI5 230 aa19.92■□□□□ 0.78
SH3TC1-220ENST00000511002 HCLS1P14317 486 aaPredicted RBP19.91■□□□□ 0.78
SH3TC1-220ENST00000511002 DICER1Q9UPY3 1922 aaKnown RBP19.91■□□□□ 0.78
SH3TC1-220ENST00000511002 DDX60Q8IY21 1712 aaKnown RBP19.9■□□□□ 0.78
SH3TC1-220ENST00000511002 SLC10A5Q5PT55 438 aa19.9■□□□□ 0.78
SH3TC1-220ENST00000511002 CHMP4AQ9BY43 222 aa19.9■□□□□ 0.78
SH3TC1-220ENST00000511002 SNED1Q8TER0 1413 aa19.9■□□□□ 0.78
SH3TC1-220ENST00000511002 SLC4A2P04920 1241 aa19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 TAF1P21675 1872 aa19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 HOXA10P31260 410 aaPredicted RBP19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 G2E3Q7L622 706 aa19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 RPGRQ92834 1020 aaKnown RBP19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 TAOK3Q9H2K8 898 aa19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 TRMT112Q9UI30 125 aaKnown RBP19.89■□□□□ 0.77
SH3TC1-220ENST00000511002 CCDC93Q567U6 631 aa19.88■□□□□ 0.77
SH3TC1-220ENST00000511002 RIC3Q7Z5B4 369 aa19.88■□□□□ 0.77
SH3TC1-220ENST00000511002 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
SH3TC1-220ENST00000511002 SH3TC1Q8TE82 1336 aa19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 CT47B1P0C2W7 299 aaPredicted RBP19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 ALDH1B1P30837 517 aa19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 RTL5Q5HYW3 569 aaPredicted RBP19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 SSH1Q8WYL5 1049 aa19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 FAM89AQ96GI7 184 aa19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 NLRP3Q96P20 1036 aa19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 COL4A1P02462 1669 aa19.87■□□□□ 0.77
SH3TC1-220ENST00000511002 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
SH3TC1-220ENST00000511002 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
SH3TC1-220ENST00000511002 MYD88Q99836 296 aa19.86■□□□□ 0.77
SH3TC1-220ENST00000511002 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
SH3TC1-220ENST00000511002 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
SH3TC1-220ENST00000511002 RBM17Q96I25 401 aaKnown RBP19.85■□□□□ 0.77
SH3TC1-220ENST00000511002 ZNF277Q9NRM2 450 aaPredicted RBP19.85■□□□□ 0.77
SH3TC1-220ENST00000511002 ABCC4O15439 1325 aa19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 FLIIQ13045 1269 aa19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 TRIM28Q13263 835 aaKnown RBP19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 ALDH1L2Q3SY69 923 aa19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 JARID2Q92833 1246 aaPredicted RBP19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 SMC4Q9NTJ3 1288 aa19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 MAP3K2Q9Y2U5 619 aa19.84■□□□□ 0.77
SH3TC1-220ENST00000511002 PPEF1O14829 653 aaPredicted RBP19.83■□□□□ 0.77
SH3TC1-220ENST00000511002 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.77
SH3TC1-220ENST00000511002 METTL22Q9BUU2 404 aaPredicted RBP19.83■□□□□ 0.77
SH3TC1-220ENST00000511002 RRAGCQ9HB90 399 aa19.83■□□□□ 0.77
SH3TC1-220ENST00000511002 ZC3H4Q9UPT8 1303 aaKnown RBP19.82■□□□□ 0.76
SH3TC1-220ENST00000511002 COL4A5P29400 1685 aa19.82■□□□□ 0.76
SH3TC1-220ENST00000511002 PI4KAP2A4QPH2 592 aa19.82■□□□□ 0.76
SH3TC1-220ENST00000511002 PI4KAP1Q8N8J0 262 aa19.82■□□□□ 0.76
SH3TC1-220ENST00000511002 KDM2BQ8NHM5 1336 aa19.81■□□□□ 0.76
SH3TC1-220ENST00000511002 GLTPD2A6NH11 291 aa19.81■□□□□ 0.76
SH3TC1-220ENST00000511002 IGKV5-2P06315 115 aa19.81■□□□□ 0.76
SH3TC1-220ENST00000511002 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
SH3TC1-220ENST00000511002 DDX58O95786 925 aaKnown RBP19.8■□□□□ 0.76
SH3TC1-220ENST00000511002 FKBP5Q13451 457 aaPredicted RBP19.8■□□□□ 0.76
SH3TC1-220ENST00000511002 RTKN2Q8IZC4 609 aa19.8■□□□□ 0.76
SH3TC1-220ENST00000511002 IRS4O14654 1257 aaPredicted RBP19.79■□□□□ 0.76
SH3TC1-220ENST00000511002 BCAR3O75815 825 aa19.79■□□□□ 0.76
SH3TC1-220ENST00000511002 POTECB2RU33 542 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms