RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 IER5Q5VY09 327 aa6.74□□□□□ -1.33
SMAD1-208ENST00000510948 ALG1LQ6GMV1 187 aa6.74□□□□□ -1.33
SMAD1-208ENST00000510948 NBPF10Q6P3W6 841 aaKnown RBP6.74□□□□□ -1.33
SMAD1-208ENST00000510948 PRICKLE2Q7Z3G6 844 aa6.74□□□□□ -1.33
SMAD1-208ENST00000510948 GGNBP2Q9H3C7 697 aa6.74□□□□□ -1.33
SMAD1-208ENST00000510948 DMGDHQ9UI17 866 aaKnown RBP6.74□□□□□ -1.33
SMAD1-208ENST00000510948 WWC3Q9ULE0 1092 aa6.74□□□□□ -1.33
SMAD1-208ENST00000510948 FANCD2Q9BXW9 1451 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 CUX1P39880 1505 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 IGSF3O75054 1194 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 DAB2P98082 770 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 C8orf34Q49A92 452 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 BICDL1Q6ZP65 573 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 LYSMD3Q7Z3D4 306 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 TMC4Q7Z404 712 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 ZNF280CQ8ND82 737 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 NEUROD4Q9HD90 331 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 DNMBPQ6XZF7 1577 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 CEP164Q9UPV0 1460 aa6.73□□□□□ -1.33
SMAD1-208ENST00000510948 PNMA6FA0A0J9YX94 578 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 SORBS3O60504 671 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 KLRG1Q96E93 195 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 FAM161BQ96MY7 647 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 CSRNP1Q96S65 589 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 MRS2Q9HD23 443 aa6.72□□□□□ -1.33
SMAD1-208ENST00000510948 IDH3AP50213 366 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 PSMD2Q13200 908 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 MRPL14Q6P1L8 145 aaKnown RBP6.71□□□□□ -1.34
SMAD1-208ENST00000510948 ZIC5Q96T25 663 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 SETDB2Q96T68 719 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 DNAJC25Q9H1X3 360 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 TIMMDC1Q9NPL8 285 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 RNF19AQ9NV58 838 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 FNDC3AQ9Y2H6 1198 aaKnown RBP6.71□□□□□ -1.34
SMAD1-208ENST00000510948 WDR97A6NE52 1622 aa6.71□□□□□ -1.34
SMAD1-208ENST00000510948 A0A1B0GTH6 734 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 A6NHS1 94 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 EIF1AYO14602 144 aaKnown RBP6.7□□□□□ -1.34
SMAD1-208ENST00000510948 SCAMP3O14828 347 aaKnown RBP6.7□□□□□ -1.34
SMAD1-208ENST00000510948 ATP4AP20648 1035 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 MSX1P28360 303 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 INPP5BP32019 993 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 ARSDP51689 593 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-208ENST00000510948 LDLRAD1Q5T700 205 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 XKR5Q6UX68 686 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 FBF1Q8TES7 1133 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 HSH2DQ96JZ2 352 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 FRMD6Q96NE9 622 aa6.7□□□□□ -1.34
SMAD1-208ENST00000510948 THOC2Q8NI27 1593 aaKnown RBP6.69□□□□□ -1.34
SMAD1-208ENST00000510948 PDS5BQ9NTI5 1447 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 TTLL8A6PVC2 850 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 GNA15P30679 374 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 ORC1Q13415 861 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 SCARF1Q14162 830 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 LRRC69Q6ZNQ3 347 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 TMEM87AQ8NBN3 555 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 CFHR5Q9BXR6 569 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 PDZRN3Q9UPQ7 1066 aa6.69□□□□□ -1.34
SMAD1-208ENST00000510948 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
SMAD1-208ENST00000510948 A0A1W2PNR3 127 aa6.68□□□□□ -1.34
SMAD1-208ENST00000510948 CPNE3O75131 537 aaKnown RBP6.68□□□□□ -1.34
SMAD1-208ENST00000510948 TNFRSF21O75509 655 aa6.68□□□□□ -1.34
SMAD1-208ENST00000510948 AVPP01185 164 aa6.68□□□□□ -1.34
SMAD1-208ENST00000510948 RHOQP17081 205 aa6.68□□□□□ -1.34
SMAD1-208ENST00000510948 CMTR1Q8N1G2 835 aaKnown RBP6.68□□□□□ -1.34
SMAD1-208ENST00000510948 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
SMAD1-208ENST00000510948 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
SMAD1-208ENST00000510948 WDR62O43379 1518 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 URB2Q14146 1524 aaKnown RBP6.67□□□□□ -1.34
SMAD1-208ENST00000510948 TOPBP1Q92547 1522 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 FIGNL2A6NMB9 653 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 UBAP1LF5GYI3 381 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 PDE12Q6L8Q7 609 aaKnown RBP6.67□□□□□ -1.34
SMAD1-208ENST00000510948 C8orf37Q96NL8 207 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 KCNMB2Q9Y691 235 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 GJA3Q9Y6H8 435 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 AK5Q9Y6K8 562 aa6.67□□□□□ -1.34
SMAD1-208ENST00000510948 SOS2Q07890 1332 aaPredicted RBP6.67□□□□□ -1.34
SMAD1-208ENST00000510948 FGD5Q6ZNL6 1462 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 RGS20O76081 388 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 EPB42P16452 691 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 ZC3H6P61129 1189 aaKnown RBP6.66□□□□□ -1.34
SMAD1-208ENST00000510948 HDLBPQ00341 1268 aaKnown RBP6.66□□□□□ -1.34
SMAD1-208ENST00000510948 ZNF438Q7Z4V0 828 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 ZFYVE28Q9HCC9 887 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 C11orf16Q9NQ32 467 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 SPG7Q9UQ90 795 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 EEA1Q15075 1411 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 MRC2Q9UBG0 1479 aa6.66□□□□□ -1.34
SMAD1-208ENST00000510948 FAM187AA6NFU0 413 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 F11P03951 625 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 ERCC5P28715 1186 aaPredicted RBP6.65□□□□□ -1.34
SMAD1-208ENST00000510948 CTC1Q2NKJ3 1217 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
SMAD1-208ENST00000510948 SNX29Q8TEQ0 813 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms