RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
PDPN-209ENST00000510906 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
PDPN-209ENST00000510906 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
PDPN-209ENST00000510906 CNTNAP4Q9C0A0 1308 aa11.52□□□□□ -0.57
PDPN-209ENST00000510906 MRC1P22897 1456 aa11.51□□□□□ -0.57
PDPN-209ENST00000510906 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
PDPN-209ENST00000510906 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
PDPN-209ENST00000510906 SLC39A6Q13433 755 aa11.51□□□□□ -0.57
PDPN-209ENST00000510906 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
PDPN-209ENST00000510906 RTCBQ9Y3I0 505 aaKnown RBP11.51□□□□□ -0.57
PDPN-209ENST00000510906 PCNTO95613 3336 aa11.51□□□□□ -0.57
PDPN-209ENST00000510906 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
PDPN-209ENST00000510906 SNPHO15079 494 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 HOXB1P14653 301 aaPredicted RBP11.5□□□□□ -0.57
PDPN-209ENST00000510906 COL9A1P20849 921 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 SH3D19Q5HYK7 790 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 TRAPPC3LQ5T215 181 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 GAS2L2Q8NHY3 880 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 PHACTR3Q96KR7 559 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 NUDCQ9Y266 331 aa11.5□□□□□ -0.57
PDPN-209ENST00000510906 PPP1R3GB7ZBB8 358 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
PDPN-209ENST00000510906 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
PDPN-209ENST00000510906 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
PDPN-209ENST00000510906 GPR162Q16538 588 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 SCN11AQ9UI33 1791 aa11.49□□□□□ -0.57
PDPN-209ENST00000510906 GNAT3A8MTJ3 354 aa11.48□□□□□ -0.57
PDPN-209ENST00000510906 ZNF831Q5JPB2 1677 aa11.48□□□□□ -0.57
PDPN-209ENST00000510906 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
PDPN-209ENST00000510906 MMP10P09238 476 aa11.47□□□□□ -0.57
PDPN-209ENST00000510906 INTS5Q6P9B9 1019 aaKnown RBP11.47□□□□□ -0.57
PDPN-209ENST00000510906 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
PDPN-209ENST00000510906 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
PDPN-209ENST00000510906 CD2APQ9Y5K6 639 aa11.47□□□□□ -0.57
PDPN-209ENST00000510906 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.57
PDPN-209ENST00000510906 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
PDPN-209ENST00000510906 GYS1P13807 737 aa11.46□□□□□ -0.57
PDPN-209ENST00000510906 YBX3P16989 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
PDPN-209ENST00000510906 RFC4P35249 363 aa11.46□□□□□ -0.57
PDPN-209ENST00000510906 TEFQ10587 303 aa11.46□□□□□ -0.57
PDPN-209ENST00000510906 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
PDPN-209ENST00000510906 CCDC87Q9NVE4 849 aa11.46□□□□□ -0.57
PDPN-209ENST00000510906 SRP68Q9UHB9 627 aaKnown RBP11.46□□□□□ -0.57
PDPN-209ENST00000510906 TJP1Q07157 1748 aa11.46□□□□□ -0.58
PDPN-209ENST00000510906 CYP19A1P11511 503 aaPredicted RBP11.45□□□□□ -0.58
PDPN-209ENST00000510906 PTPREP23469 700 aa11.45□□□□□ -0.58
PDPN-209ENST00000510906 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
PDPN-209ENST00000510906 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
PDPN-209ENST00000510906 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
PDPN-209ENST00000510906 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
PDPN-209ENST00000510906 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
PDPN-209ENST00000510906 PRELPP51888 382 aa11.44□□□□□ -0.58
PDPN-209ENST00000510906 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
PDPN-209ENST00000510906 TTC5Q8N0Z6 440 aa11.44□□□□□ -0.58
PDPN-209ENST00000510906 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
PDPN-209ENST00000510906 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
PDPN-209ENST00000510906 ZBTB1Q9Y2K1 713 aa11.44□□□□□ -0.58
PDPN-209ENST00000510906 CICQ96RK0 1608 aaPredicted RBP11.44□□□□□ -0.58
PDPN-209ENST00000510906 MYH14Q7Z406 1995 aaKnown RBP11.44□□□□□ -0.58
PDPN-209ENST00000510906 SOS1Q07889 1333 aaPredicted RBP11.43□□□□□ -0.58
PDPN-209ENST00000510906 USP42Q9H9J4 1324 aaKnown RBP11.43□□□□□ -0.58
PDPN-209ENST00000510906 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
PDPN-209ENST00000510906 MCM10Q7L590 875 aa11.43□□□□□ -0.58
PDPN-209ENST00000510906 PCMTD1Q96MG8 357 aaPredicted RBP11.43□□□□□ -0.58
PDPN-209ENST00000510906 KCNQ3O43525 872 aa11.42□□□□□ -0.58
PDPN-209ENST00000510906 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
PDPN-209ENST00000510906 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
PDPN-209ENST00000510906 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
PDPN-209ENST00000510906 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 GRIN3BO60391 1043 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 CANXP27824 592 aaKnown RBP11.41□□□□□ -0.58
PDPN-209ENST00000510906 DDR1Q08345 913 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 RALBP1Q15311 655 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 COL15A1P39059 1388 aa11.41□□□□□ -0.58
PDPN-209ENST00000510906 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 RCCD1A6NED2 376 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 TRIM6-TRIM34B2RNG4 842 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 ZPR1O75312 459 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 STARD3NLO95772 234 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 FMNL2Q96PY5 1086 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 ZMYND15Q9H091 742 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 C10orf71Q711Q0 1435 aa11.4□□□□□ -0.58
PDPN-209ENST00000510906 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
PDPN-209ENST00000510906 UBR2Q8IWV8 1755 aa11.39□□□□□ -0.59
PDPN-209ENST00000510906 HTATSF1O43719 755 aaKnown RBP11.39□□□□□ -0.59
PDPN-209ENST00000510906 FLIIQ13045 1269 aa11.39□□□□□ -0.59
PDPN-209ENST00000510906 NARFQ9UHQ1 456 aa11.39□□□□□ -0.59
PDPN-209ENST00000510906 VIRMAQ69YN4 1812 aaKnown RBP11.38□□□□□ -0.59
PDPN-209ENST00000510906 A0A0G2JLW4 131 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms