RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 HSP90AB3PQ58FF7 597 aa29.85■■■□□ 2.37
SNF8-209ENST00000510558 RRAGCQ9HB90 399 aa29.84■■■□□ 2.37
SNF8-209ENST00000510558 DBF4Q9UBU7 674 aaPredicted RBP29.84■■■□□ 2.37
SNF8-209ENST00000510558 GLTPD2A6NH11 291 aa29.83■■■□□ 2.37
SNF8-209ENST00000510558 HSPA6P17066 643 aa29.83■■■□□ 2.37
SNF8-209ENST00000510558 UTP14AQ9BVJ6 771 aaKnown RBP29.83■■■□□ 2.37
SNF8-209ENST00000510558 MRS2Q9HD23 443 aa29.83■■■□□ 2.37
SNF8-209ENST00000510558 C16orf71Q8IYS4 520 aaPredicted RBP29.82■■■□□ 2.36
SNF8-209ENST00000510558 OLFM4Q6UX06 510 aa29.81■■■□□ 2.36
SNF8-209ENST00000510558 RPGRQ92834 1020 aaKnown RBP29.81■■■□□ 2.36
SNF8-209ENST00000510558 TCIRG1Q13488 830 aa29.8■■■□□ 2.36
SNF8-209ENST00000510558 HOXA10P31260 410 aaPredicted RBP29.79■■■□□ 2.36
SNF8-209ENST00000510558 NLRP10Q86W26 655 aa29.79■■■□□ 2.36
SNF8-209ENST00000510558 HYPKQ9NX55 129 aa29.79■■■□□ 2.36
SNF8-209ENST00000510558 LAMB2P55268 1798 aa29.79■■■□□ 2.36
SNF8-209ENST00000510558 RNF123Q5XPI4 1314 aa29.78■■■□□ 2.36
SNF8-209ENST00000510558 FKBP4Q02790 459 aaKnown RBP eCLIP29.78■■■□□ 2.36
SNF8-209ENST00000510558 C3orf67Q6ZVT6 689 aa29.78■■■□□ 2.36
SNF8-209ENST00000510558 RTKN2Q8IZC4 609 aa29.78■■■□□ 2.36
SNF8-209ENST00000510558 PLBD2Q8NHP8 589 aa29.78■■■□□ 2.36
SNF8-209ENST00000510558 RBM46Q8TBY0 533 aaKnown RBP29.78■■■□□ 2.36
SNF8-209ENST00000510558 WDR90Q96KV7 1748 aa29.77■■■□□ 2.36
SNF8-209ENST00000510558 ELL2O00472 640 aaPredicted RBP29.77■■■□□ 2.36
SNF8-209ENST00000510558 SLC10A5Q5PT55 438 aa29.77■■■□□ 2.36
SNF8-209ENST00000510558 NLRP3Q96P20 1036 aa29.77■■■□□ 2.36
SNF8-209ENST00000510558 CCDC27Q2M243 656 aa29.76■■■□□ 2.35
SNF8-209ENST00000510558 DPY19L2Q6NUT2 758 aa29.76■■■□□ 2.35
SNF8-209ENST00000510558 ANKRD13DQ6ZTN6 518 aa29.76■■■□□ 2.35
SNF8-209ENST00000510558 RBM17Q96I25 401 aaKnown RBP29.76■■■□□ 2.35
SNF8-209ENST00000510558 C8orf58Q8NAV2 365 aa29.75■■■□□ 2.35
SNF8-209ENST00000510558 SNED1Q8TER0 1413 aa29.75■■■□□ 2.35
SNF8-209ENST00000510558 CRAMP1Q96RY5 1269 aa29.75■■■□□ 2.35
SNF8-209ENST00000510558 ZNF277Q9NRM2 450 aaPredicted RBP29.74■■■□□ 2.35
SNF8-209ENST00000510558 TRMT112Q9UI30 125 aaKnown RBP29.74■■■□□ 2.35
SNF8-209ENST00000510558 VEGFAP15692 232 aaPredicted RBP29.73■■■□□ 2.35
SNF8-209ENST00000510558 WWC1Q8IX03 1113 aa29.73■■■□□ 2.35
SNF8-209ENST00000510558 CC2D2BQ6DHV5 1058 aa29.72■■■□□ 2.35
SNF8-209ENST00000510558 SH3TC1Q8TE82 1336 aa29.71■■■□□ 2.35
SNF8-209ENST00000510558 HCLS1P14317 486 aaPredicted RBP29.71■■■□□ 2.35
SNF8-209ENST00000510558 SYNE4Q8N205 404 aa29.71■■■□□ 2.35
SNF8-209ENST00000510558 DDX60Q8IY21 1712 aaKnown RBP29.71■■■□□ 2.35
SNF8-209ENST00000510558 FSTL1Q12841 308 aa29.7■■■□□ 2.35
SNF8-209ENST00000510558 TSR2Q969E8 191 aaKnown RBP29.7■■■□□ 2.35
SNF8-209ENST00000510558 ISCA1Q9BUE6 129 aa29.7■■■□□ 2.35
SNF8-209ENST00000510558 PPEF1O14829 653 aaPredicted RBP29.69■■■□□ 2.34
SNF8-209ENST00000510558 NCBP3Q53F19 620 aaKnown RBP29.69■■■□□ 2.34
SNF8-209ENST00000510558 ZNF428Q96B54 188 aa29.69■■■□□ 2.34
SNF8-209ENST00000510558 PSMD1Q99460 953 aa29.69■■■□□ 2.34
SNF8-209ENST00000510558 PHAXQ9H814 394 aaKnown RBP29.69■■■□□ 2.34
SNF8-209ENST00000510558 POTECB2RU33 542 aa29.68■■■□□ 2.34
SNF8-209ENST00000510558 ATP5J2-PTCD1G3V325 749 aa29.68■■■□□ 2.34
SNF8-209ENST00000510558 IARSP41252 1262 aaKnown RBP29.68■■■□□ 2.34
SNF8-209ENST00000510558 TSPYL6Q8N831 410 aa29.68■■■□□ 2.34
SNF8-209ENST00000510558 TCERG1O14776 1098 aaKnown RBP29.67■■■□□ 2.34
SNF8-209ENST00000510558 DDNO94850 711 aaPredicted RBP29.67■■■□□ 2.34
SNF8-209ENST00000510558 APLP1P51693 650 aa29.67■■■□□ 2.34
SNF8-209ENST00000510558 GOLGA2Q08379 1002 aa29.67■■■□□ 2.34
SNF8-209ENST00000510558 CCDC30Q5VVM6 783 aa29.67■■■□□ 2.34
SNF8-209ENST00000510558 CHMP4AQ9BY43 222 aa29.67■■■□□ 2.34
SNF8-209ENST00000510558 ABCC4O15439 1325 aa29.67■■■□□ 2.34
SNF8-209ENST00000510558 GRIPAP1Q4V328 841 aa29.66■■■□□ 2.34
SNF8-209ENST00000510558 RIC3Q7Z5B4 369 aa29.66■■■□□ 2.34
SNF8-209ENST00000510558 SLC51AQ86UW1 340 aa29.66■■■□□ 2.34
SNF8-209ENST00000510558 IL16Q14005 1332 aa29.66■■■□□ 2.34
SNF8-209ENST00000510558 SMC1BQ8NDV3 1235 aa29.65■■■□□ 2.34
SNF8-209ENST00000510558 TAF1P21675 1872 aa29.65■■■□□ 2.34
SNF8-209ENST00000510558 CEP350Q5VT06 3117 aa29.65■■■□□ 2.34
SNF8-209ENST00000510558 TRIM28Q13263 835 aaKnown RBP29.63■■■□□ 2.33
SNF8-209ENST00000510558 FAM89AQ96GI7 184 aa29.63■■■□□ 2.33
SNF8-209ENST00000510558 ZNF541Q9H0D2 1346 aa29.63■■■□□ 2.33
SNF8-209ENST00000510558 ATP6V0A2Q9Y487 856 aa29.62■■■□□ 2.33
SNF8-209ENST00000510558 SCN4AP35499 1836 aa29.61■■■□□ 2.33
SNF8-209ENST00000510558 DDX46Q7L014 1031 aaKnown RBP29.61■■■□□ 2.33
SNF8-209ENST00000510558 TMX4Q9H1E5 349 aaPredicted RBP29.61■■■□□ 2.33
SNF8-209ENST00000510558 SALL2Q9Y467 1007 aaPredicted RBP29.61■■■□□ 2.33
SNF8-209ENST00000510558 COL4A5P29400 1685 aa29.6■■■□□ 2.33
SNF8-209ENST00000510558 BBOX1O75936 387 aa29.6■■■□□ 2.33
SNF8-209ENST00000510558 FZD9O00144 591 aa29.59■■■□□ 2.33
SNF8-209ENST00000510558 GRAPQ13588 217 aa29.59■■■□□ 2.33
SNF8-209ENST00000510558 TWISTNBQ3B726 338 aaPredicted RBP29.59■■■□□ 2.33
SNF8-209ENST00000510558 RTL5Q5HYW3 569 aaPredicted RBP29.59■■■□□ 2.33
SNF8-209ENST00000510558 GRAPLQ8TC17 118 aaPredicted RBP29.59■■■□□ 2.33
SNF8-209ENST00000510558 JDP2Q8WYK2 163 aa29.59■■■□□ 2.33
SNF8-209ENST00000510558 L3MBTL3Q96JM7 780 aaPredicted RBP29.59■■■□□ 2.33
SNF8-209ENST00000510558 MYD88Q99836 296 aa29.59■■■□□ 2.33
SNF8-209ENST00000510558 DDX58O95786 925 aaKnown RBP29.58■■■□□ 2.33
SNF8-209ENST00000510558 FAM9BQ8IZU0 186 aa29.58■■■□□ 2.33
SNF8-209ENST00000510558 WDR63Q8IWG1 891 aa29.57■■■□□ 2.32
SNF8-209ENST00000510558 STK31Q9BXU1 1019 aa29.57■■■□□ 2.32
SNF8-209ENST00000510558 FANCIQ9NVI1 1328 aa29.56■■■□□ 2.32
SNF8-209ENST00000510558 IQCA1LA6NCM1 817 aa29.56■■■□□ 2.32
SNF8-209ENST00000510558 SP8Q8IXZ3 490 aa29.56■■■□□ 2.32
SNF8-209ENST00000510558 LARGE2Q8N3Y3 721 aa29.56■■■□□ 2.32
SNF8-209ENST00000510558 METTL22Q9BUU2 404 aaPredicted RBP29.56■■■□□ 2.32
SNF8-209ENST00000510558 LRRC37AA6NMS7 1700 aa29.55■■■□□ 2.32
SNF8-209ENST00000510558 IRS4O14654 1257 aaPredicted RBP29.55■■■□□ 2.32
SNF8-209ENST00000510558 SF3B3Q15393 1217 aaKnown RBP29.55■■■□□ 2.32
SNF8-209ENST00000510558 ZBTB38Q8NAP3 1195 aaPredicted RBP29.55■■■□□ 2.32
SNF8-209ENST00000510558 CCDC191Q8NCU4 936 aa29.54■■■□□ 2.32
SNF8-209ENST00000510558 CACNA1FO60840 1977 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms