RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 ITPK1Q13572 414 aa12.85□□□□□ -0.35
NEK1-205ENST00000510108 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
NEK1-205ENST00000510108 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
NEK1-205ENST00000510108 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
NEK1-205ENST00000510108 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
NEK1-205ENST00000510108 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
NEK1-205ENST00000510108 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
NEK1-205ENST00000510108 SLC4A10Q6U841 1118 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
NEK1-205ENST00000510108 LINS1Q8NG48 757 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
NEK1-205ENST00000510108 SRCIN1Q9C0H9 1055 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
NEK1-205ENST00000510108 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 APBA3O96018 575 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 GNAI3P08754 354 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 PIP4K2AP48426 406 aaPredicted RBP12.83□□□□□ -0.36
NEK1-205ENST00000510108 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 MEIS3Q99687 375 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
NEK1-205ENST00000510108 UTYO14607 1347 aa12.82□□□□□ -0.36
NEK1-205ENST00000510108 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
NEK1-205ENST00000510108 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
NEK1-205ENST00000510108 AIMP1Q12904 312 aaKnown RBP12.82□□□□□ -0.36
NEK1-205ENST00000510108 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
NEK1-205ENST00000510108 RIC3Q7Z5B4 369 aa12.82□□□□□ -0.36
NEK1-205ENST00000510108 EP400Q96L91 3159 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 COL15A1P39059 1388 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 IGKV5-2P06315 115 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
NEK1-205ENST00000510108 TTLL7Q6ZT98 887 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
NEK1-205ENST00000510108 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 USP44Q9H0E7 712 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 NUP98P52948 1817 aa12.81□□□□□ -0.36
NEK1-205ENST00000510108 IGHDP01880 384 aa12.8□□□□□ -0.36
NEK1-205ENST00000510108 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
NEK1-205ENST00000510108 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
NEK1-205ENST00000510108 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
NEK1-205ENST00000510108 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
NEK1-205ENST00000510108 MAP3K15Q6ZN16 1313 aa12.8□□□□□ -0.36
NEK1-205ENST00000510108 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
NEK1-205ENST00000510108 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
NEK1-205ENST00000510108 GNAI2P04899 355 aa12.79□□□□□ -0.36
NEK1-205ENST00000510108 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
NEK1-205ENST00000510108 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
NEK1-205ENST00000510108 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
NEK1-205ENST00000510108 UBR3Q6ZT12 1888 aa12.79□□□□□ -0.36
NEK1-205ENST00000510108 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
NEK1-205ENST00000510108 CWF19L2Q2TBE0 894 aaKnown RBP12.78□□□□□ -0.36
NEK1-205ENST00000510108 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
NEK1-205ENST00000510108 CEP85Q6P2H3 762 aa12.78□□□□□ -0.36
NEK1-205ENST00000510108 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
NEK1-205ENST00000510108 MYD88Q99836 296 aa12.78□□□□□ -0.36
NEK1-205ENST00000510108 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
NEK1-205ENST00000510108 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
NEK1-205ENST00000510108 GRM8O00222 908 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 PLSCR1O15162 318 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
NEK1-205ENST00000510108 GCKRQ14397 625 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
NEK1-205ENST00000510108 SMC5Q8IY18 1101 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
NEK1-205ENST00000510108 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.37
NEK1-205ENST00000510108 A0A087WZG4 1122 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 SOCS7O14512 581 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 NBPF7P0C2Y1 421 aaPredicted RBP12.76□□□□□ -0.37
NEK1-205ENST00000510108 LAMB2P55268 1798 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 TCIRG1Q13488 830 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 MTX1Q13505 466 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 CCDC191Q8NCU4 936 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
NEK1-205ENST00000510108 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
NEK1-205ENST00000510108 CASP7P55210 303 aa12.75□□□□□ -0.37
NEK1-205ENST00000510108 MKRN3Q13064 507 aaKnown RBP12.75□□□□□ -0.37
NEK1-205ENST00000510108 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
NEK1-205ENST00000510108 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
NEK1-205ENST00000510108 CAMTA2O94983 1202 aa12.74□□□□□ -0.37
NEK1-205ENST00000510108 ATP8B2P98198 1209 aa12.74□□□□□ -0.37
NEK1-205ENST00000510108 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
NEK1-205ENST00000510108 GCC1Q96CN9 775 aa12.74□□□□□ -0.37
NEK1-205ENST00000510108 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
NEK1-205ENST00000510108 CWC25Q9NXE8 425 aaPredicted RBP12.74□□□□□ -0.37
NEK1-205ENST00000510108 C9orf78Q9NZ63 289 aaPredicted RBP12.74□□□□□ -0.37
NEK1-205ENST00000510108 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 H7C1W4 665 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 HMMRO75330 724 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 EN1Q05925 392 aaPredicted RBP12.73□□□□□ -0.37
NEK1-205ENST00000510108 IER5LQ5T953 404 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 SSH3Q8TE77 659 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 DCTPP1Q9H773 170 aa12.73□□□□□ -0.37
NEK1-205ENST00000510108 TUBGCP6Q96RT7 1819 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms