RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FMR1Q06787 632 aaKnown RBP eCLIP21.09■□□□□ 0.97
RAB40C-202ENST00000509637 GTF2E1P29083 439 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-202ENST00000509637 EAPPQ56P03 285 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-202ENST00000509637 CNTNAP1P78357 1384 aa21.08■□□□□ 0.96
RAB40C-202ENST00000509637 IQCA1LA6NCM1 817 aa21.07■□□□□ 0.96
RAB40C-202ENST00000509637 EPHX2P34913 555 aa21.07■□□□□ 0.96
RAB40C-202ENST00000509637 MAP1SQ66K74 1059 aaPredicted RBP21.07■□□□□ 0.96
RAB40C-202ENST00000509637 GIGYF2Q6Y7W6 1299 aaKnown RBP21.07■□□□□ 0.96
RAB40C-202ENST00000509637 PSMD1Q99460 953 aa21.07■□□□□ 0.96
RAB40C-202ENST00000509637 HACL1Q9UJ83 578 aa21.07■□□□□ 0.96
RAB40C-202ENST00000509637 RIC1Q4ADV7 1423 aa21.06■□□□□ 0.96
RAB40C-202ENST00000509637 TCERG1O14776 1098 aaKnown RBP21.06■□□□□ 0.96
RAB40C-202ENST00000509637 FOXN1O15353 648 aa21.06■□□□□ 0.96
RAB40C-202ENST00000509637 VEGFBP49765 207 aa21.06■□□□□ 0.96
RAB40C-202ENST00000509637 NYXQ9GZU5 481 aa21.06■□□□□ 0.96
RAB40C-202ENST00000509637 KRT24Q2M2I5 525 aa21.05■□□□□ 0.96
RAB40C-202ENST00000509637 EIF2S2P20042 333 aaKnown RBP21.04■□□□□ 0.96
RAB40C-202ENST00000509637 KIF6Q6ZMV9 814 aa21.04■□□□□ 0.96
RAB40C-202ENST00000509637 CRAMP1Q96RY5 1269 aa21.04■□□□□ 0.96
RAB40C-202ENST00000509637 IBTKQ9P2D0 1353 aaPredicted RBP21.04■□□□□ 0.96
RAB40C-202ENST00000509637 EPS15P42566 896 aa21.03■□□□□ 0.96
RAB40C-202ENST00000509637 SCNN1DP51172 638 aa21.03■□□□□ 0.96
RAB40C-202ENST00000509637 CNTROBQ8N137 903 aa21.03■□□□□ 0.96
RAB40C-202ENST00000509637 GPC2Q8N158 579 aa21.03■□□□□ 0.96
RAB40C-202ENST00000509637 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
RAB40C-202ENST00000509637 TMEM88BA6NKF7 163 aa21.02■□□□□ 0.96
RAB40C-202ENST00000509637 TMPOP42166 694 aaKnown RBP21.02■□□□□ 0.96
RAB40C-202ENST00000509637 RIPK4P57078 832 aa21.02■□□□□ 0.96
RAB40C-202ENST00000509637 SLC10A5Q5PT55 438 aa21.02■□□□□ 0.96
RAB40C-202ENST00000509637 NECTIN2Q92692 538 aa21.02■□□□□ 0.96
RAB40C-202ENST00000509637 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
RAB40C-202ENST00000509637 CLEC11AQ9Y240 323 aa21.02■□□□□ 0.96
RAB40C-202ENST00000509637 RPGRQ92834 1020 aaKnown RBP21.01■□□□□ 0.95
RAB40C-202ENST00000509637 GJA3Q9Y6H8 435 aa21.01■□□□□ 0.95
RAB40C-202ENST00000509637 ERBB4Q15303 1308 aa21.01■□□□□ 0.95
RAB40C-202ENST00000509637 PPEF1O14829 653 aaPredicted RBP21■□□□□ 0.95
RAB40C-202ENST00000509637 CC2D2BQ6DHV5 1058 aa21■□□□□ 0.95
RAB40C-202ENST00000509637 TAF1P21675 1872 aa20.99■□□□□ 0.95
RAB40C-202ENST00000509637 NEFMP07197 916 aa20.99■□□□□ 0.95
RAB40C-202ENST00000509637 RBM17Q96I25 401 aaKnown RBP20.99■□□□□ 0.95
RAB40C-202ENST00000509637 LAMB2P55268 1798 aa20.98■□□□□ 0.95
RAB40C-202ENST00000509637 COPS6Q7L5N1 327 aa20.98■□□□□ 0.95
RAB40C-202ENST00000509637 LARGE2Q8N3Y3 721 aa20.98■□□□□ 0.95
RAB40C-202ENST00000509637 JDP2Q8WYK2 163 aa20.98■□□□□ 0.95
RAB40C-202ENST00000509637 ABCC4O15439 1325 aa20.98■□□□□ 0.95
RAB40C-202ENST00000509637 MAPK8IP3Q9UPT6 1336 aa20.98■□□□□ 0.95
RAB40C-202ENST00000509637 RASSF10A6NK89 507 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-202ENST00000509637 AOC3Q16853 763 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 NLRP10Q86W26 655 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 XAGE3Q8WTP9 111 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 UTP14AQ9BVJ6 771 aaKnown RBP20.97■□□□□ 0.95
RAB40C-202ENST00000509637 WBP1LQ9NX94 342 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 TRIM35Q9UPQ4 493 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 ATP6V0A2Q9Y487 856 aa20.97■□□□□ 0.95
RAB40C-202ENST00000509637 COL4A1P02462 1669 aa20.96■□□□□ 0.95
RAB40C-202ENST00000509637 TRAF5O00463 557 aa20.96■□□□□ 0.95
RAB40C-202ENST00000509637 EIF6P56537 245 aaKnown RBP20.96■□□□□ 0.95
RAB40C-202ENST00000509637 AIMP1Q12904 312 aaKnown RBP20.96■□□□□ 0.95
RAB40C-202ENST00000509637 PARP10Q53GL7 1025 aa20.96■□□□□ 0.95
RAB40C-202ENST00000509637 PPP1R42Q7Z4L9 355 aa20.96■□□□□ 0.95
RAB40C-202ENST00000509637 PNMA8AQ86V59 439 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-202ENST00000509637 CHL1O00533 1208 aa20.95■□□□□ 0.94
RAB40C-202ENST00000509637 CXCL9Q07325 125 aa20.95■□□□□ 0.94
RAB40C-202ENST00000509637 CST9Q5W186 159 aa20.95■□□□□ 0.94
RAB40C-202ENST00000509637 NLRP3Q96P20 1036 aa20.95■□□□□ 0.94
RAB40C-202ENST00000509637 DDX21Q9NR30 783 aaKnown RBP eCLIP20.95■□□□□ 0.94
RAB40C-202ENST00000509637 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
RAB40C-202ENST00000509637 RTFDC1Q9BY42 306 aaPredicted RBP20.94■□□□□ 0.94
RAB40C-202ENST00000509637 PPIP5K2O43314 1243 aa20.93■□□□□ 0.94
RAB40C-202ENST00000509637 TCIRG1Q13488 830 aa20.93■□□□□ 0.94
RAB40C-202ENST00000509637 DEFB115Q30KQ5 88 aa20.93■□□□□ 0.94
RAB40C-202ENST00000509637 PNNQ9H307 717 aaKnown RBP20.93■□□□□ 0.94
RAB40C-202ENST00000509637 BABAM1Q9NWV8 329 aa20.93■□□□□ 0.94
RAB40C-202ENST00000509637 ANKRD36CQ5JPF3 1778 aa20.92■□□□□ 0.94
RAB40C-202ENST00000509637 SHTN1A0MZ66 631 aa20.92■□□□□ 0.94
RAB40C-202ENST00000509637 LBX1P52954 281 aa20.91■□□□□ 0.94
RAB40C-202ENST00000509637 HIRAP54198 1017 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-202ENST00000509637 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
RAB40C-202ENST00000509637 RALBP1Q15311 655 aa20.91■□□□□ 0.94
RAB40C-202ENST00000509637 NIM1KQ8IY84 436 aa20.91■□□□□ 0.94
RAB40C-202ENST00000509637 WDR33Q9C0J8 1336 aaKnown RBP20.91■□□□□ 0.94
RAB40C-202ENST00000509637 PRDM10Q9NQV6 1147 aa20.91■□□□□ 0.94
RAB40C-202ENST00000509637 DUOX1Q9NRD9 1551 aa20.9■□□□□ 0.94
RAB40C-202ENST00000509637 YDJCA8MPS7 323 aa20.9■□□□□ 0.94
RAB40C-202ENST00000509637 HSPA8P11142 646 aaKnown RBP20.9■□□□□ 0.94
RAB40C-202ENST00000509637 GRIPAP1Q4V328 841 aa20.9■□□□□ 0.94
RAB40C-202ENST00000509637 SP8Q8IXZ3 490 aa20.9■□□□□ 0.94
RAB40C-202ENST00000509637 GPRC5DQ9NZD1 345 aa20.9■□□□□ 0.94
RAB40C-202ENST00000509637 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
RAB40C-202ENST00000509637 BBOX1O75936 387 aa20.88■□□□□ 0.93
RAB40C-202ENST00000509637 CTCFP49711 727 aaPredicted RBP20.88■□□□□ 0.93
RAB40C-202ENST00000509637 GMPSP49915 693 aaPredicted RBP20.88■□□□□ 0.93
RAB40C-202ENST00000509637 DLK2Q6UY11 383 aa20.88■□□□□ 0.93
RAB40C-202ENST00000509637 USP50Q70EL3 339 aaPredicted RBP20.88■□□□□ 0.93
RAB40C-202ENST00000509637 ISCA1Q9BUE6 129 aa20.88■□□□□ 0.93
RAB40C-202ENST00000509637 TRMT112Q9UI30 125 aaKnown RBP20.88■□□□□ 0.93
RAB40C-202ENST00000509637 ZNRF3Q9ULT6 936 aa20.88■□□□□ 0.93
RAB40C-202ENST00000509637 ADAMTS8Q9UP79 889 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms