RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
MBD4-207ENST00000509587 A0A0G2JLW4 131 aa22.22■■□□□ 1.15
MBD4-207ENST00000509587 DPEP1P16444 411 aa22.22■■□□□ 1.15
MBD4-207ENST00000509587 KCNA3P22001 575 aa22.22■■□□□ 1.15
MBD4-207ENST00000509587 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
MBD4-207ENST00000509587 NEXNQ0ZGT2 675 aa22.22■■□□□ 1.15
MBD4-207ENST00000509587 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
MBD4-207ENST00000509587 ABCC12Q96J65 1359 aa22.22■■□□□ 1.15
MBD4-207ENST00000509587 KIAA1551Q9HCM1 1747 aa22.21■■□□□ 1.15
MBD4-207ENST00000509587 KLRG2A4D1S0 409 aaPredicted RBP22.21■■□□□ 1.15
MBD4-207ENST00000509587 PDE6BP35913 854 aa22.21■■□□□ 1.15
MBD4-207ENST00000509587 SLC10A5Q5PT55 438 aa22.21■■□□□ 1.15
MBD4-207ENST00000509587 LINS1Q8NG48 757 aa22.21■■□□□ 1.15
MBD4-207ENST00000509587 CWC25Q9NXE8 425 aaPredicted RBP22.21■■□□□ 1.15
MBD4-207ENST00000509587 NEURL1BA8MQ27 555 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 BCAR3O75815 825 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 CHRNA5P30532 468 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 CWF19L2Q2TBE0 894 aaKnown RBP22.2■■□□□ 1.14
MBD4-207ENST00000509587 BEND3Q5T5X7 828 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 SYNE4Q8N205 404 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 NOB1Q9ULX3 412 aaKnown RBP22.2■■□□□ 1.14
MBD4-207ENST00000509587 SH3TC1Q8TE82 1336 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 RIC1Q4ADV7 1423 aa22.2■■□□□ 1.14
MBD4-207ENST00000509587 ZBTB38Q8NAP3 1195 aaPredicted RBP22.19■■□□□ 1.14
MBD4-207ENST00000509587 PDZRN3Q9UPQ7 1066 aa22.19■■□□□ 1.14
MBD4-207ENST00000509587 ANKRD31Q8N7Z5 1873 aa22.19■■□□□ 1.14
MBD4-207ENST00000509587 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
MBD4-207ENST00000509587 C2CD5Q86YS7 1000 aa22.18■■□□□ 1.14
MBD4-207ENST00000509587 FAM89AQ96GI7 184 aa22.18■■□□□ 1.14
MBD4-207ENST00000509587 H0YIN7 160 aa22.17■■□□□ 1.14
MBD4-207ENST00000509587 PCCAP05165 728 aaPredicted RBP22.17■■□□□ 1.14
MBD4-207ENST00000509587 GCKRQ14397 625 aa22.17■■□□□ 1.14
MBD4-207ENST00000509587 ARHGAP45Q92619 1136 aa22.17■■□□□ 1.14
MBD4-207ENST00000509587 SRGNP10124 158 aa22.16■■□□□ 1.14
MBD4-207ENST00000509587 CRY2Q49AN0 593 aa22.16■■□□□ 1.14
MBD4-207ENST00000509587 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
MBD4-207ENST00000509587 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
MBD4-207ENST00000509587 C3orf67Q6ZVT6 689 aa22.15■■□□□ 1.14
MBD4-207ENST00000509587 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
MBD4-207ENST00000509587 PIM2Q9P1W9 311 aa22.15■■□□□ 1.14
MBD4-207ENST00000509587 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
MBD4-207ENST00000509587 H7C1W4 665 aa22.14■■□□□ 1.13
MBD4-207ENST00000509587 ALDH1L1O75891 902 aa22.14■■□□□ 1.13
MBD4-207ENST00000509587 RTL5Q5HYW3 569 aaPredicted RBP22.14■■□□□ 1.13
MBD4-207ENST00000509587 TNRC6CQ9HCJ0 1690 aaKnown RBP22.14■■□□□ 1.13
MBD4-207ENST00000509587 JARID2Q92833 1246 aaPredicted RBP22.13■■□□□ 1.13
MBD4-207ENST00000509587 MASTLQ96GX5 879 aa22.13■■□□□ 1.13
MBD4-207ENST00000509587 NLRP3Q96P20 1036 aa22.13■■□□□ 1.13
MBD4-207ENST00000509587 SRCIN1Q9C0H9 1055 aa22.13■■□□□ 1.13
MBD4-207ENST00000509587 CDHR2Q9BYE9 1310 aa22.12■■□□□ 1.13
MBD4-207ENST00000509587 IRS4O14654 1257 aaPredicted RBP22.12■■□□□ 1.13
MBD4-207ENST00000509587 IPO8O15397 1037 aaKnown RBP22.12■■□□□ 1.13
MBD4-207ENST00000509587 CASP7P55210 303 aa22.12■■□□□ 1.13
MBD4-207ENST00000509587 STYK1Q6J9G0 422 aa22.12■■□□□ 1.13
MBD4-207ENST00000509587 WWC3Q9ULE0 1092 aa22.12■■□□□ 1.13
MBD4-207ENST00000509587 NPR1P16066 1061 aa22.11■■□□□ 1.13
MBD4-207ENST00000509587 YBX3P16989 372 aaKnown RBP eCLIP22.11■■□□□ 1.131e-7■□□□□ 10.3
MBD4-207ENST00000509587 ATF7IPQ6VMQ6 1270 aa22.11■■□□□ 1.13
MBD4-207ENST00000509587 RCAN3Q9UKA8 241 aa22.11■■□□□ 1.13
MBD4-207ENST00000509587 COL11A2P13942 1736 aaPredicted RBP22.11■■□□□ 1.13
MBD4-207ENST00000509587 TRIM27P14373 513 aa22.1■■□□□ 1.13
MBD4-207ENST00000509587 HOXA10P31260 410 aaPredicted RBP22.1■■□□□ 1.13
MBD4-207ENST00000509587 DALRD3Q5D0E6 543 aaKnown RBP22.1■■□□□ 1.13
MBD4-207ENST00000509587 FRAT1Q92837 279 aaPredicted RBP22.1■■□□□ 1.13
MBD4-207ENST00000509587 ZNF622Q969S3 477 aaKnown RBP eCLIP22.1■■□□□ 1.131e-12■■■□□ 18.2
MBD4-207ENST00000509587 DLEC1Q9Y238 1755 aa22.1■■□□□ 1.13
MBD4-207ENST00000509587 HSP90B1P14625 803 aaKnown RBP22.09■■□□□ 1.13
MBD4-207ENST00000509587 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
MBD4-207ENST00000509587 GPR162Q16538 588 aa22.09■■□□□ 1.13
MBD4-207ENST00000509587 ZKSCAN2Q63HK3 967 aa22.09■■□□□ 1.13
MBD4-207ENST00000509587 UBE3BQ7Z3V4 1068 aa22.09■■□□□ 1.13
MBD4-207ENST00000509587 TTLL6Q8N841 843 aa22.09■■□□□ 1.13
MBD4-207ENST00000509587 BRCA1P38398 1863 aaKnown RBP22.09■■□□□ 1.13
MBD4-207ENST00000509587 ABCC4O15439 1325 aa22.08■■□□□ 1.13
MBD4-207ENST00000509587 GOLGB1Q14789 3259 aaKnown RBP22.08■■□□□ 1.13
MBD4-207ENST00000509587 GRM8O00222 908 aa22.08■■□□□ 1.13
MBD4-207ENST00000509587 CNKSR1Q969H4 720 aa22.08■■□□□ 1.13
MBD4-207ENST00000509587 BCS1LQ9Y276 419 aa22.08■■□□□ 1.13
MBD4-207ENST00000509587 DDX60Q8IY21 1712 aaKnown RBP22.08■■□□□ 1.12
MBD4-207ENST00000509587 PDE8AO60658 829 aa22.07■■□□□ 1.12
MBD4-207ENST00000509587 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
MBD4-207ENST00000509587 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
MBD4-207ENST00000509587 RPGRQ92834 1020 aaKnown RBP22.07■■□□□ 1.12
MBD4-207ENST00000509587 PLA2G12BQ9BX93 195 aa22.07■■□□□ 1.12
MBD4-207ENST00000509587 TNNQ9UQP3 1299 aa22.07■■□□□ 1.12
MBD4-207ENST00000509587 UTYO14607 1347 aa22.06■■□□□ 1.12
MBD4-207ENST00000509587 INTS3Q68E01 1043 aaKnown RBP22.06■■□□□ 1.12
MBD4-207ENST00000509587 CRAMP1Q96RY5 1269 aa22.06■■□□□ 1.12
MBD4-207ENST00000509587 DCAF8L1A6NGE4 600 aa22.05■■□□□ 1.12
MBD4-207ENST00000509587 ALDH1B1P30837 517 aa22.05■■□□□ 1.12
MBD4-207ENST00000509587 PRPF40BQ6NWY9 871 aaKnown RBP22.05■■□□□ 1.12
MBD4-207ENST00000509587 RBM17Q96I25 401 aaKnown RBP22.05■■□□□ 1.12
MBD4-207ENST00000509587 USP44Q9H0E7 712 aa22.05■■□□□ 1.12
MBD4-207ENST00000509587 C9orf78Q9NZ63 289 aaPredicted RBP22.05■■□□□ 1.12
MBD4-207ENST00000509587 LAMB2P55268 1798 aa22.04■■□□□ 1.12
MBD4-207ENST00000509587 NBPF7P0C2Y1 421 aaPredicted RBP22.04■■□□□ 1.12
MBD4-207ENST00000509587 GRIN3BO60391 1043 aa22.03■■□□□ 1.12
MBD4-207ENST00000509587 C7orf43Q8WVR3 580 aa22.03■■□□□ 1.12
MBD4-207ENST00000509587 CLUAP1Q96AJ1 413 aa22.03■■□□□ 1.12
MBD4-207ENST00000509587 CTSWP56202 376 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms