RNA–Protein interactions for RNA: ENST00000509405.5

LINC00461-210, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-210ENST00000509405 FNBP4Q8N3X1 1017 aaPredicted RBP11.54□□□□□ -0.56
LINC00461-210ENST00000509405 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
LINC00461-210ENST00000509405 CHMP4CQ96CF2 233 aa11.54□□□□□ -0.56
LINC00461-210ENST00000509405 MYD88Q99836 296 aa11.54□□□□□ -0.56
LINC00461-210ENST00000509405 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
LINC00461-210ENST00000509405 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
LINC00461-210ENST00000509405 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
LINC00461-210ENST00000509405 SLIT2O94813 1529 aa11.54□□□□□ -0.56
LINC00461-210ENST00000509405 COL5A2P05997 1499 aaPredicted RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 PSMA5P28066 241 aa11.53□□□□□ -0.56
LINC00461-210ENST00000509405 RABL6Q3YEC7 729 aaPredicted RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
LINC00461-210ENST00000509405 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 TNPO1Q92973 898 aaKnown RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 SUCLG2Q96I99 432 aa11.53□□□□□ -0.56
LINC00461-210ENST00000509405 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 SIPA1L3O60292 1781 aaPredicted RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
LINC00461-210ENST00000509405 SCN11AQ9UI33 1791 aa11.53□□□□□ -0.56
LINC00461-210ENST00000509405 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
LINC00461-210ENST00000509405 PKD1L3Q7Z443 1732 aa11.52□□□□□ -0.56
LINC00461-210ENST00000509405 PARP4Q9UKK3 1724 aaKnown RBP11.52□□□□□ -0.56
LINC00461-210ENST00000509405 RGPD2P0DJD1 1756 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 A0A087WZG4 1122 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 GOLGA6L3A6NEY3 463 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.57
LINC00461-210ENST00000509405 TM6SF1Q9BZW5 370 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 GPR108Q9NPR9 543 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 USP16Q9Y5T5 823 aa11.52□□□□□ -0.57
LINC00461-210ENST00000509405 HSP90B1P14625 803 aaKnown RBP11.51□□□□□ -0.57
LINC00461-210ENST00000509405 TRIM28Q13263 835 aaKnown RBP11.51□□□□□ -0.57
LINC00461-210ENST00000509405 CUL4AQ13619 759 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 ANKRD1Q15327 319 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 KIF6Q6ZMV9 814 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 UNC5CLQ8IV45 518 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 HMG20BQ9P0W2 317 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 ATP6V1DQ9Y5K8 247 aa11.51□□□□□ -0.57
LINC00461-210ENST00000509405 A0A0G2JS52 829 aa11.5□□□□□ -0.57
LINC00461-210ENST00000509405 H7C1W4 665 aa11.5□□□□□ -0.57
LINC00461-210ENST00000509405 ATP5JP18859 108 aa11.5□□□□□ -0.57
LINC00461-210ENST00000509405 IL15P40933 162 aaPredicted RBP11.5□□□□□ -0.57
LINC00461-210ENST00000509405 KRT32Q14532 448 aa11.5□□□□□ -0.57
LINC00461-210ENST00000509405 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
LINC00461-210ENST00000509405 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
LINC00461-210ENST00000509405 SH2B1Q9NRF2 756 aaPredicted RBP11.5□□□□□ -0.57
LINC00461-210ENST00000509405 PRAMEF22A3QJZ6 481 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 CIAO1O76071 339 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 NCLP19338 710 aaKnown RBP11.49□□□□□ -0.57
LINC00461-210ENST00000509405 KCNJ4P48050 445 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 MRE11P49959 708 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 LRP10Q7Z4F1 713 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
LINC00461-210ENST00000509405 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
LINC00461-210ENST00000509405 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
LINC00461-210ENST00000509405 THRAP3Q9Y2W1 955 aaKnown RBP11.49□□□□□ -0.57
LINC00461-210ENST00000509405 EXOC5O00471 708 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 VPS53Q5VIR6 699 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 TSHZ3Q63HK5 1081 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 CWC27Q6UX04 472 aaKnown RBP11.48□□□□□ -0.57
LINC00461-210ENST00000509405 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 TMX3Q96JJ7 454 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 BTG4Q9NY30 223 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 LIMCH1Q9UPQ0 1083 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 CYP46A1Q9Y6A2 500 aa11.48□□□□□ -0.57
LINC00461-210ENST00000509405 WDR33Q9C0J8 1336 aaKnown RBP11.48□□□□□ -0.57
LINC00461-210ENST00000509405 SASH1O94885 1247 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 BAG4O95429 457 aaKnown RBP11.47□□□□□ -0.57
LINC00461-210ENST00000509405 MBD3O95983 291 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 KLHL40Q2TBA0 621 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 POTEHQ6S545 545 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 KCNB2Q92953 911 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 SYAP1Q96A49 352 aaPredicted RBP11.47□□□□□ -0.57
LINC00461-210ENST00000509405 KAZALD1Q96I82 304 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 FSD1Q9BTV5 496 aa11.47□□□□□ -0.57
LINC00461-210ENST00000509405 LSG1Q9H089 658 aaKnown RBP11.47□□□□□ -0.57
LINC00461-210ENST00000509405 RGPD5Q99666 1765 aa11.46□□□□□ -0.57
LINC00461-210ENST00000509405 TNS2Q63HR2 1409 aa11.46□□□□□ -0.57
LINC00461-210ENST00000509405 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 CYP2E1P05181 493 aaPredicted RBP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
LINC00461-210ENST00000509405 TNNI3KQ59H18 835 aa11.46□□□□□ -0.57
LINC00461-210ENST00000509405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 EAF2Q96CJ1 260 aaPredicted RBP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 AK7Q96M32 723 aa11.46□□□□□ -0.57
LINC00461-210ENST00000509405 ALDH8A1Q9H2A2 487 aaPredicted RBP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 PA2G4Q9UQ80 394 aaKnown RBP11.46□□□□□ -0.57
LINC00461-210ENST00000509405 FPGT-TNNI3KV9GXZ4 949 aa11.46□□□□□ -0.57
LINC00461-210ENST00000509405 HMGB1P09429 215 aaKnown RBP11.45□□□□□ -0.58
LINC00461-210ENST00000509405 PDCP20941 246 aa11.45□□□□□ -0.58
LINC00461-210ENST00000509405 VPS72Q15906 364 aa11.45□□□□□ -0.58
LINC00461-210ENST00000509405 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
LINC00461-210ENST00000509405 LMBR1LQ6UX01 489 aa11.45□□□□□ -0.58
LINC00461-210ENST00000509405 MAP4K1Q92918 833 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms