RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 CCDC191Q8NCU4 936 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 PABPN1LA6NDY0 278 aaKnown RBP12.75□□□□□ -0.37
CCSER1-209ENST00000509176 TRAK2O60296 914 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 NUP62CLQ9H1M0 184 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 TCHPQ9BT92 498 aa12.75□□□□□ -0.37
CCSER1-209ENST00000509176 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
CCSER1-209ENST00000509176 H0YHG0 523 aa12.74□□□□□ -0.37
CCSER1-209ENST00000509176 SP4Q02446 784 aa12.74□□□□□ -0.37
CCSER1-209ENST00000509176 ABCC5O15440 1437 aa12.74□□□□□ -0.37
CCSER1-209ENST00000509176 PRC1O43663 620 aa12.74□□□□□ -0.37
CCSER1-209ENST00000509176 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
CCSER1-209ENST00000509176 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
CCSER1-209ENST00000509176 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
CCSER1-209ENST00000509176 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 IARSP41252 1262 aaKnown RBP12.73□□□□□ -0.37
CCSER1-209ENST00000509176 TRAF1Q13077 416 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 CAMK4Q16566 473 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCSER1-209ENST00000509176 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
CCSER1-209ENST00000509176 DNA2P51530 1060 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 SPA17Q15506 151 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 LARGE2Q8N3Y3 721 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 HMGXB3Q12766 1538 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 CCDC40Q4G0X9 1142 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 FILIP1Q7Z7B0 1213 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CCSER1-209ENST00000509176 ECHDC1Q9NTX5 307 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 USP16Q9Y5T5 823 aa12.73□□□□□ -0.37
CCSER1-209ENST00000509176 PIK3R4Q99570 1358 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 H0YIN7 160 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 PHACTR2O75167 634 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 TDRD12Q587J7 1177 aaKnown RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 UBA7P41226 1012 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 FAM193AP78312 1265 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 SYNCQ9H7C4 482 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 METAP2P50579 478 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 AMPD3Q01432 767 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 HSP90AA2PQ14568 343 aaPredicted RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.72□□□□□ -0.37
CCSER1-209ENST00000509176 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
CCSER1-209ENST00000509176 CALM1P0DP23 149 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 CALM2P0DP24 149 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 CALM3P0DP25 149 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 GSTTP1A0A1W2PQM5 241 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 WTAPQ15007 396 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 FAM43AQ8N2R8 423 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 NCOA7Q8NI08 942 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 ERMNQ8TAM6 284 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 IVNS1ABPQ9Y6Y0 642 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 ASXL2Q76L83 1435 aa12.71□□□□□ -0.37
CCSER1-209ENST00000509176 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 DPH6Q7L8W6 267 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.38
CCSER1-209ENST00000509176 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 PTPRCP08575 1304 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 STX6O43752 255 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 SLFN5Q08AF3 891 aa12.71□□□□□ -0.38
CCSER1-209ENST00000509176 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
CCSER1-209ENST00000509176 UFL1O94874 794 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 MTIF2P46199 727 aaKnown RBP12.7□□□□□ -0.38
CCSER1-209ENST00000509176 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 GCP02774 474 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
CCSER1-209ENST00000509176 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 HOOK3Q86VS8 718 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 KCNA6P17658 529 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 CNNM3Q8NE01 707 aa12.7□□□□□ -0.38
CCSER1-209ENST00000509176 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms