RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
CXCL1-202ENST00000509101 CRY2Q49AN0 593 aa21.28■■□□□ 1
CXCL1-202ENST00000509101 GJA3Q9Y6H8 435 aa21.28■■□□□ 1
CXCL1-202ENST00000509101 DEFB115Q30KQ5 88 aa21.27■■□□□ 1
CXCL1-202ENST00000509101 ABT1Q9ULW3 272 aaKnown RBP21.27■■□□□ 1
CXCL1-202ENST00000509101 RIC1Q4ADV7 1423 aa21.27■■□□□ 1
CXCL1-202ENST00000509101 EIF6P56537 245 aaKnown RBP21.26■□□□□ 0.99
CXCL1-202ENST00000509101 SLC51AQ86UW1 340 aa21.26■□□□□ 0.99
CXCL1-202ENST00000509101 RPGRQ92834 1020 aaKnown RBP21.26■□□□□ 0.99
CXCL1-202ENST00000509101 MAP3K15Q6ZN16 1313 aa21.26■□□□□ 0.99
CXCL1-202ENST00000509101 IBTKQ9P2D0 1353 aaPredicted RBP21.25■□□□□ 0.99
CXCL1-202ENST00000509101 GPTP24298 496 aa21.25■□□□□ 0.99
CXCL1-202ENST00000509101 LMOD1P29536 600 aaPredicted RBP21.25■□□□□ 0.99
CXCL1-202ENST00000509101 KIF6Q6ZMV9 814 aa21.25■□□□□ 0.99
CXCL1-202ENST00000509101 UBN2Q6ZU65 1347 aa21.25■□□□□ 0.99
CXCL1-202ENST00000509101 WDR33Q9C0J8 1336 aaKnown RBP21.25■□□□□ 0.99
CXCL1-202ENST00000509101 LAMB2P55268 1798 aa21.24■□□□□ 0.99
CXCL1-202ENST00000509101 ERVV-1B6SEH8 477 aa21.24■□□□□ 0.99
CXCL1-202ENST00000509101 HSPA8P11142 646 aaKnown RBP21.24■□□□□ 0.99
CXCL1-202ENST00000509101 TTLL7Q6ZT98 887 aa21.24■□□□□ 0.99
CXCL1-202ENST00000509101 RRP7AQ9Y3A4 280 aaKnown RBP21.24■□□□□ 0.99
CXCL1-202ENST00000509101 MYL6BP14649 208 aa21.23■□□□□ 0.99
CXCL1-202ENST00000509101 CC2D2BQ6DHV5 1058 aa21.23■□□□□ 0.99
CXCL1-202ENST00000509101 LARGE2Q8N3Y3 721 aa21.23■□□□□ 0.99
CXCL1-202ENST00000509101 ZBTB3Q9H5J0 574 aa21.23■□□□□ 0.99
CXCL1-202ENST00000509101 DDX21Q9NR30 783 aaKnown RBP eCLIP21.23■□□□□ 0.99
CXCL1-202ENST00000509101 ANKRD36CQ5JPF3 1778 aa21.23■□□□□ 0.99
CXCL1-202ENST00000509101 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
CXCL1-202ENST00000509101 SCNN1DP51172 638 aa21.22■□□□□ 0.99
CXCL1-202ENST00000509101 FMR1Q06787 632 aaKnown RBP eCLIP21.22■□□□□ 0.99
CXCL1-202ENST00000509101 PPEF1O14829 653 aaPredicted RBP21.21■□□□□ 0.99
CXCL1-202ENST00000509101 HOXA10P31260 410 aaPredicted RBP21.21■□□□□ 0.99
CXCL1-202ENST00000509101 EPS15P42566 896 aa21.21■□□□□ 0.99
CXCL1-202ENST00000509101 SUSD4Q5VX71 490 aa21.21■□□□□ 0.99
CXCL1-202ENST00000509101 PAXIP1Q6ZW49 1069 aaPredicted RBP21.21■□□□□ 0.99
CXCL1-202ENST00000509101 PNISRQ8TF01 805 aaKnown RBP21.21■□□□□ 0.99
CXCL1-202ENST00000509101 EIF4A1P60842 406 aaKnown RBP21.2■□□□□ 0.98
CXCL1-202ENST00000509101 MAP2K1Q02750 393 aaPredicted RBP21.2■□□□□ 0.98
CXCL1-202ENST00000509101 RBM17Q96I25 401 aaKnown RBP21.2■□□□□ 0.98
CXCL1-202ENST00000509101 NTSR2O95665 410 aa21.19■□□□□ 0.98
CXCL1-202ENST00000509101 NEFMP07197 916 aa21.19■□□□□ 0.98
CXCL1-202ENST00000509101 GRM1Q13255 1194 aa21.19■□□□□ 0.98
CXCL1-202ENST00000509101 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
CXCL1-202ENST00000509101 GRIPAP1Q4V328 841 aa21.18■□□□□ 0.98
CXCL1-202ENST00000509101 C3orf67Q6ZVT6 689 aa21.18■□□□□ 0.98
CXCL1-202ENST00000509101 NIM1KQ8IY84 436 aa21.18■□□□□ 0.98
CXCL1-202ENST00000509101 CAPNS2Q96L46 248 aa21.18■□□□□ 0.98
CXCL1-202ENST00000509101 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
CXCL1-202ENST00000509101 TRAF5O00463 557 aa21.17■□□□□ 0.98
CXCL1-202ENST00000509101 PPIP5K2O43314 1243 aa21.17■□□□□ 0.98
CXCL1-202ENST00000509101 CYP4F22Q6NT55 531 aa21.17■□□□□ 0.98
CXCL1-202ENST00000509101 ZNF34Q8IZ26 560 aa21.17■□□□□ 0.98
CXCL1-202ENST00000509101 ABHD8Q96I13 439 aa21.17■□□□□ 0.98
CXCL1-202ENST00000509101 AOC3Q16853 763 aa21.16■□□□□ 0.98
CXCL1-202ENST00000509101 USP50Q70EL3 339 aaPredicted RBP21.16■□□□□ 0.98
CXCL1-202ENST00000509101 GIGYF2Q6Y7W6 1299 aaKnown RBP21.15■□□□□ 0.98
CXCL1-202ENST00000509101 TAF1P21675 1872 aa21.14■□□□□ 0.97
CXCL1-202ENST00000509101 ECE1P42892 770 aa21.14■□□□□ 0.97
CXCL1-202ENST00000509101 NFE2L2Q16236 605 aa21.14■□□□□ 0.97
CXCL1-202ENST00000509101 PPP1R42Q7Z4L9 355 aa21.14■□□□□ 0.97
CXCL1-202ENST00000509101 ABCC4O15439 1325 aa21.13■□□□□ 0.97
CXCL1-202ENST00000509101 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
CXCL1-202ENST00000509101 CST9Q5W186 159 aa21.13■□□□□ 0.97
CXCL1-202ENST00000509101 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
CXCL1-202ENST00000509101 BEGAINQ9BUH8 593 aa21.13■□□□□ 0.97
CXCL1-202ENST00000509101 PARP10Q53GL7 1025 aa21.12■□□□□ 0.97
CXCL1-202ENST00000509101 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
CXCL1-202ENST00000509101 GPR101Q96P66 508 aaPredicted RBP21.12■□□□□ 0.97
CXCL1-202ENST00000509101 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
CXCL1-202ENST00000509101 ADARB2Q9NS39 739 aaKnown RBP21.12■□□□□ 0.97
CXCL1-202ENST00000509101 GPRC5DQ9NZD1 345 aa21.12■□□□□ 0.97
CXCL1-202ENST00000509101 ATP6V0A2Q9Y487 856 aa21.12■□□□□ 0.97
CXCL1-202ENST00000509101 TLL2Q9Y6L7 1015 aa21.12■□□□□ 0.97
CXCL1-202ENST00000509101 FAM161AQ3B820 660 aa21.11■□□□□ 0.97
CXCL1-202ENST00000509101 TSKSQ9UJT2 592 aa21.11■□□□□ 0.97
CXCL1-202ENST00000509101 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
CXCL1-202ENST00000509101 AOC2O75106 756 aa21.1■□□□□ 0.97
CXCL1-202ENST00000509101 UTP14AQ9BVJ6 771 aaKnown RBP21.1■□□□□ 0.97
CXCL1-202ENST00000509101 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
CXCL1-202ENST00000509101 LRRC37AA6NMS7 1700 aa21.09■□□□□ 0.97
CXCL1-202ENST00000509101 GMPSP49915 693 aaPredicted RBP21.09■□□□□ 0.97
CXCL1-202ENST00000509101 CXCL9Q07325 125 aa21.09■□□□□ 0.97
CXCL1-202ENST00000509101 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
CXCL1-202ENST00000509101 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
CXCL1-202ENST00000509101 CASP8AP2Q9UKL3 1982 aa21.08■□□□□ 0.97
CXCL1-202ENST00000509101 CELF2O95319 508 aaKnown RBP21.08■□□□□ 0.97
CXCL1-202ENST00000509101 ANXA1P04083 346 aa21.08■□□□□ 0.97
CXCL1-202ENST00000509101 EIF2S2P20042 333 aaKnown RBP21.08■□□□□ 0.97
CXCL1-202ENST00000509101 PROSER3Q2NL68 480 aa21.08■□□□□ 0.97
CXCL1-202ENST00000509101 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.97
CXCL1-202ENST00000509101 DDX60Q8IY21 1712 aaKnown RBP21.08■□□□□ 0.97
CXCL1-202ENST00000509101 VPS33BQ9H267 617 aa21.08■□□□□ 0.97
CXCL1-202ENST00000509101 DUOX1Q9NRD9 1551 aa21.08■□□□□ 0.97
CXCL1-202ENST00000509101 PDIA6Q15084 440 aa21.07■□□□□ 0.96
CXCL1-202ENST00000509101 DPP8Q6V1X1 898 aaPredicted RBP21.07■□□□□ 0.96
CXCL1-202ENST00000509101 RTFDC1Q9BY42 306 aaPredicted RBP21.07■□□□□ 0.96
CXCL1-202ENST00000509101 GLIS2Q9BZE0 524 aaPredicted RBP21.07■□□□□ 0.96
CXCL1-202ENST00000509101 CCDC85CA6NKD9 419 aa21.06■□□□□ 0.96
CXCL1-202ENST00000509101 SLC10A5Q5PT55 438 aa21.06■□□□□ 0.96
CXCL1-202ENST00000509101 CIAPIN1Q6FI81 312 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms