RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
SNCA-211ENST00000508895 KIF3CO14782 793 aa11.26□□□□□ -0.61
SNCA-211ENST00000508895 ST5P78524 1137 aa11.26□□□□□ -0.61
SNCA-211ENST00000508895 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
SNCA-211ENST00000508895 PRPF40BQ6NWY9 871 aaKnown RBP11.26□□□□□ -0.61
SNCA-211ENST00000508895 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
SNCA-211ENST00000508895 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
SNCA-211ENST00000508895 ZNF521Q96K83 1311 aa11.26□□□□□ -0.61
SNCA-211ENST00000508895 COL4A5P29400 1685 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 GNAI1P63096 354 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 TPTE2Q6XPS3 522 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 G2E3Q7L622 706 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
SNCA-211ENST00000508895 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
SNCA-211ENST00000508895 HOXB7P09629 217 aa11.24□□□□□ -0.61
SNCA-211ENST00000508895 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
SNCA-211ENST00000508895 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
SNCA-211ENST00000508895 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
SNCA-211ENST00000508895 NPHP1O15259 732 aa11.23□□□□□ -0.61
SNCA-211ENST00000508895 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
SNCA-211ENST00000508895 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
SNCA-211ENST00000508895 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
SNCA-211ENST00000508895 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
SNCA-211ENST00000508895 NPR1P16066 1061 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 IL16Q14005 1332 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 RIC1Q4ADV7 1423 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 DNAJC5GQ8N7S2 189 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 CNKSR1Q969H4 720 aa11.22□□□□□ -0.61
SNCA-211ENST00000508895 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
SNCA-211ENST00000508895 DBF4Q9UBU7 674 aaPredicted RBP11.22□□□□□ -0.61
SNCA-211ENST00000508895 POTECB2RU33 542 aa11.21□□□□□ -0.61
SNCA-211ENST00000508895 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.61
SNCA-211ENST00000508895 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
SNCA-211ENST00000508895 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
SNCA-211ENST00000508895 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
SNCA-211ENST00000508895 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
SNCA-211ENST00000508895 MYH3P11055 1940 aa11.2□□□□□ -0.62
SNCA-211ENST00000508895 VAMP4O75379 141 aa11.2□□□□□ -0.62
SNCA-211ENST00000508895 LMNB1P20700 586 aa11.2□□□□□ -0.62
SNCA-211ENST00000508895 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
SNCA-211ENST00000508895 HOXA10P31260 410 aaPredicted RBP11.2□□□□□ -0.62
SNCA-211ENST00000508895 EXOSC9Q06265 439 aaKnown RBP11.2□□□□□ -0.62
SNCA-211ENST00000508895 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
SNCA-211ENST00000508895 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
SNCA-211ENST00000508895 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
SNCA-211ENST00000508895 ZNF277Q9NRM2 450 aaPredicted RBP11.2□□□□□ -0.62
SNCA-211ENST00000508895 HYPKQ9NX55 129 aa11.2□□□□□ -0.62
SNCA-211ENST00000508895 ABCC4O15439 1325 aa11.19□□□□□ -0.62
SNCA-211ENST00000508895 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
SNCA-211ENST00000508895 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
SNCA-211ENST00000508895 MYD88Q99836 296 aa11.19□□□□□ -0.62
SNCA-211ENST00000508895 RRAGCQ9HB90 399 aa11.19□□□□□ -0.62
SNCA-211ENST00000508895 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
SNCA-211ENST00000508895 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
SNCA-211ENST00000508895 LTBP3Q9NS15 1303 aa11.18□□□□□ -0.62
SNCA-211ENST00000508895 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
SNCA-211ENST00000508895 TAOK3Q9H2K8 898 aa11.18□□□□□ -0.62
SNCA-211ENST00000508895 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
SNCA-211ENST00000508895 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 APLP1P51693 650 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 CCDC30Q5VVM6 783 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
SNCA-211ENST00000508895 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 SH3TC1Q8TE82 1336 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 PI4KAP2A4QPH2 592 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
SNCA-211ENST00000508895 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNCA-211ENST00000508895 FKBP4Q02790 459 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNCA-211ENST00000508895 TRIM28Q13263 835 aaKnown RBP11.16□□□□□ -0.62
SNCA-211ENST00000508895 CWF19L2Q2TBE0 894 aaKnown RBP11.16□□□□□ -0.62
SNCA-211ENST00000508895 CCDC93Q567U6 631 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 PI4KAP1Q8N8J0 262 aa11.16□□□□□ -0.62
SNCA-211ENST00000508895 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
SNCA-211ENST00000508895 METTL22Q9BUU2 404 aaPredicted RBP11.16□□□□□ -0.62
SNCA-211ENST00000508895 ZBED9Q6R2W3 1325 aa11.15□□□□□ -0.62
SNCA-211ENST00000508895 GLTPD2A6NH11 291 aa11.15□□□□□ -0.62
SNCA-211ENST00000508895 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.62
SNCA-211ENST00000508895 ALDH1B1P30837 517 aa11.15□□□□□ -0.62
SNCA-211ENST00000508895 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
SNCA-211ENST00000508895 RBM17Q96I25 401 aaKnown RBP11.15□□□□□ -0.62
SNCA-211ENST00000508895 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
SNCA-211ENST00000508895 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
SNCA-211ENST00000508895 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
SNCA-211ENST00000508895 F6X3S4 739 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms