RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 RNF123Q5XPI4 1314 aa13.24□□□□□ -0.29
SH3D21-206ENST00000508854 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
SH3D21-206ENST00000508854 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
SH3D21-206ENST00000508854 CRAMP1Q96RY5 1269 aa13.24□□□□□ -0.29
SH3D21-206ENST00000508854 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
SH3D21-206ENST00000508854 WBP1LQ9NX94 342 aa13.24□□□□□ -0.29
SH3D21-206ENST00000508854 RIC1Q4ADV7 1423 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 LAMB4A4D0S4 1761 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 ERBB4Q15303 1308 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 MAP1SQ66K74 1059 aaPredicted RBP13.23□□□□□ -0.29
SH3D21-206ENST00000508854 OLFM4Q6UX06 510 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 ABT1Q9ULW3 272 aaKnown RBP13.23□□□□□ -0.29
SH3D21-206ENST00000508854 RRP7AQ9Y3A4 280 aaKnown RBP13.23□□□□□ -0.29
SH3D21-206ENST00000508854 GJA3Q9Y6H8 435 aa13.23□□□□□ -0.29
SH3D21-206ENST00000508854 ECE1P42892 770 aa13.22□□□□□ -0.29
SH3D21-206ENST00000508854 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
SH3D21-206ENST00000508854 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
SH3D21-206ENST00000508854 NIM1KQ8IY84 436 aa13.22□□□□□ -0.29
SH3D21-206ENST00000508854 NLRP3Q96P20 1036 aa13.22□□□□□ -0.29
SH3D21-206ENST00000508854 ADAMTSL1Q8N6G6 1762 aa13.22□□□□□ -0.29
SH3D21-206ENST00000508854 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
SH3D21-206ENST00000508854 NUP98P52948 1817 aa13.21□□□□□ -0.29
SH3D21-206ENST00000508854 MYL6BP14649 208 aa13.21□□□□□ -0.29
SH3D21-206ENST00000508854 EIF4A1P60842 406 aaKnown RBP13.21□□□□□ -0.29
SH3D21-206ENST00000508854 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.29
SH3D21-206ENST00000508854 BEGAINQ9BUH8 593 aa13.21□□□□□ -0.29
SH3D21-206ENST00000508854 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
SH3D21-206ENST00000508854 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
SH3D21-206ENST00000508854 GPTP24298 496 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 LBX1P52954 281 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 NFE2L2Q16236 605 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 GIGYF2Q6Y7W6 1299 aaKnown RBP13.2□□□□□ -0.3
SH3D21-206ENST00000508854 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
SH3D21-206ENST00000508854 MAPK8IP3Q9UPT6 1336 aa13.19□□□□□ -0.3
SH3D21-206ENST00000508854 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
SH3D21-206ENST00000508854 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
SH3D21-206ENST00000508854 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
SH3D21-206ENST00000508854 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 PPIP5K2O43314 1243 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 BBOX1O75936 387 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 NTSR2O95665 410 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
SH3D21-206ENST00000508854 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
SH3D21-206ENST00000508854 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
SH3D21-206ENST00000508854 UBN2Q6ZU65 1347 aa13.17□□□□□ -0.3
SH3D21-206ENST00000508854 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
SH3D21-206ENST00000508854 EPS15P42566 896 aa13.17□□□□□ -0.3
SH3D21-206ENST00000508854 SCNN1DP51172 638 aa13.17□□□□□ -0.3
SH3D21-206ENST00000508854 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
SH3D21-206ENST00000508854 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
SH3D21-206ENST00000508854 DLG5Q8TDM6 1919 aa13.17□□□□□ -0.3
SH3D21-206ENST00000508854 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
SH3D21-206ENST00000508854 MAP2K2P36507 400 aa13.16□□□□□ -0.3
SH3D21-206ENST00000508854 TNIP1Q15025 636 aa13.16□□□□□ -0.3
SH3D21-206ENST00000508854 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
SH3D21-206ENST00000508854 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
SH3D21-206ENST00000508854 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
SH3D21-206ENST00000508854 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
SH3D21-206ENST00000508854 CDHR2Q9BYE9 1310 aa13.15□□□□□ -0.3
SH3D21-206ENST00000508854 CA12O43570 354 aa13.15□□□□□ -0.3
SH3D21-206ENST00000508854 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
SH3D21-206ENST00000508854 AOC3Q16853 763 aa13.15□□□□□ -0.3
SH3D21-206ENST00000508854 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
SH3D21-206ENST00000508854 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
SH3D21-206ENST00000508854 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
SH3D21-206ENST00000508854 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
SH3D21-206ENST00000508854 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
SH3D21-206ENST00000508854 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
SH3D21-206ENST00000508854 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
SH3D21-206ENST00000508854 MPNDQ8N594 471 aa13.14□□□□□ -0.31
SH3D21-206ENST00000508854 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
SH3D21-206ENST00000508854 ABHD8Q96I13 439 aa13.14□□□□□ -0.31
SH3D21-206ENST00000508854 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
SH3D21-206ENST00000508854 CXCL9Q07325 125 aa13.13□□□□□ -0.31
SH3D21-206ENST00000508854 CST9Q5W186 159 aa13.13□□□□□ -0.31
SH3D21-206ENST00000508854 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
SH3D21-206ENST00000508854 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
SH3D21-206ENST00000508854 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
SH3D21-206ENST00000508854 ABCC4O15439 1325 aa13.13□□□□□ -0.31
SH3D21-206ENST00000508854 COL4A5P29400 1685 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 RIPK4P57078 832 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 GRM1Q13255 1194 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 PGAP2Q9UHJ9 254 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
SH3D21-206ENST00000508854 H7C1D1 291 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 TRAF5O00463 557 aa13.11□□□□□ -0.31
SH3D21-206ENST00000508854 CELF2O95319 508 aaKnown RBP13.11□□□□□ -0.31
SH3D21-206ENST00000508854 GMPSP49915 693 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms