RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-213ENST00000508848 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-213ENST00000508848 UBN2Q6ZU65 1347 aa13.59□□□□□ -0.23
POLR2J3-213ENST00000508848 YBX3P16989 372 aaKnown RBP eCLIP13.58□□□□□ -0.24
POLR2J3-213ENST00000508848 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-213ENST00000508848 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
POLR2J3-213ENST00000508848 MASTLQ96GX5 879 aa13.58□□□□□ -0.24
POLR2J3-213ENST00000508848 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-213ENST00000508848 NPHP1O15259 732 aa13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 NPR1P16066 1061 aa13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 GTF2E1P29083 439 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 ALDH1L2Q3SY69 923 aa13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 RIC3Q7Z5B4 369 aa13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 C2CD5Q86YS7 1000 aa13.57□□□□□ -0.24
POLR2J3-213ENST00000508848 FLIIQ13045 1269 aa13.56□□□□□ -0.24
POLR2J3-213ENST00000508848 GRIPAP1Q4V328 841 aa13.56□□□□□ -0.24
POLR2J3-213ENST00000508848 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
POLR2J3-213ENST00000508848 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
POLR2J3-213ENST00000508848 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 PI4KAP2A4QPH2 592 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 GPTP24298 496 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 CHRNA5P30532 468 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 SOGA3Q5TF21 947 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 PI4KAP1Q8N8J0 262 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
POLR2J3-213ENST00000508848 NEXNQ0ZGT2 675 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 ZBTB38Q8NAP3 1195 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 TRMT112Q9UI30 125 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 SBF1O95248 1867 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 ADCY9O60503 1353 aa13.54□□□□□ -0.24
POLR2J3-213ENST00000508848 PCCAP05165 728 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 SF3B3Q15393 1217 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 G2E3Q7L622 706 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 C7orf43Q8WVR3 580 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 BCS1LQ9Y276 419 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 MAP3K2Q9Y2U5 619 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 PTPRCP08575 1304 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 COL11A2P13942 1736 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
POLR2J3-213ENST00000508848 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
POLR2J3-213ENST00000508848 NUTM1Q86Y26 1132 aa13.52□□□□□ -0.25
POLR2J3-213ENST00000508848 DNAAF4Q8WXU2 420 aa13.52□□□□□ -0.25
POLR2J3-213ENST00000508848 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
POLR2J3-213ENST00000508848 LTBP3Q9NS15 1303 aa13.52□□□□□ -0.25
POLR2J3-213ENST00000508848 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
POLR2J3-213ENST00000508848 BBOX1O75936 387 aa13.51□□□□□ -0.25
POLR2J3-213ENST00000508848 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
POLR2J3-213ENST00000508848 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-213ENST00000508848 TMC4Q7Z404 712 aa13.51□□□□□ -0.25
POLR2J3-213ENST00000508848 ZNF622Q969S3 477 aaKnown RBP eCLIP13.51□□□□□ -0.25
POLR2J3-213ENST00000508848 LAMB2P55268 1798 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 NEURL1BA8MQ27 555 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 H7C1W4 665 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 ARHGAP45Q92619 1136 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 MYD88Q99836 296 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 MYH3P11055 1940 aa13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 DICER1Q9UPY3 1922 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-213ENST00000508848 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 RTKN2Q8IZC4 609 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 SSH1Q8WYL5 1049 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 RPGRQ92834 1020 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
POLR2J3-213ENST00000508848 CCDC88AQ3V6T2 1871 aa13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 TNRC6CQ9HCJ0 1690 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 IRS4O14654 1257 aaPredicted RBP13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 PDE8AO60658 829 aa13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 GCKRQ14397 625 aa13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 BEND3Q5T5X7 828 aa13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 VPS33BQ9H267 617 aa13.48□□□□□ -0.25
POLR2J3-213ENST00000508848 CACNA1SQ13698 1873 aa13.47□□□□□ -0.25
POLR2J3-213ENST00000508848 YY1P25490 414 aa13.47□□□□□ -0.25
POLR2J3-213ENST00000508848 RARSP54136 660 aaKnown RBP13.47□□□□□ -0.25
POLR2J3-213ENST00000508848 RTL9Q8NET4 1388 aa13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 LMNB1P20700 586 aa13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 CASP7P55210 303 aa13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 SP8Q8IXZ3 490 aa13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms