RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 ZNF280CQ8ND82 737 aa10.41□□□□□ -0.74
GYPB-210ENST00000508841 DMGDHQ9UI17 866 aaKnown RBP10.41□□□□□ -0.74
GYPB-210ENST00000508841 FAM157BP0CG42 384 aa10.4□□□□□ -0.74
GYPB-210ENST00000508841 MAPK1P28482 360 aa10.4□□□□□ -0.74
GYPB-210ENST00000508841 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
GYPB-210ENST00000508841 PIK3R5Q8WYR1 880 aa10.4□□□□□ -0.74
GYPB-210ENST00000508841 RBCK1Q9BYM8 510 aa10.4□□□□□ -0.74
GYPB-210ENST00000508841 PCDHGC4Q9Y5F7 938 aa10.4□□□□□ -0.74
GYPB-210ENST00000508841 ATXN7O15265 892 aaPredicted RBP10.39□□□□□ -0.75
GYPB-210ENST00000508841 RASSF7Q02833 373 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 TYRO3Q06418 890 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 PDE3BQ13370 1112 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 LAMC2Q13753 1193 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 TTC16Q8NEE8 873 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 CEP63Q96MT8 703 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 PHF24Q9UPV7 400 aa10.39□□□□□ -0.75
GYPB-210ENST00000508841 ZBTB39O15060 712 aa10.38□□□□□ -0.75
GYPB-210ENST00000508841 FZD6O60353 706 aa10.38□□□□□ -0.75
GYPB-210ENST00000508841 INPP5BP32019 993 aa10.38□□□□□ -0.75
GYPB-210ENST00000508841 EHHADHQ08426 723 aa10.38□□□□□ -0.75
GYPB-210ENST00000508841 ZCCHC2Q9C0B9 1178 aaKnown RBP10.38□□□□□ -0.75
GYPB-210ENST00000508841 FNDC3AQ9Y2H6 1198 aaKnown RBP10.38□□□□□ -0.75
GYPB-210ENST00000508841 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
GYPB-210ENST00000508841 DBN1Q16643 649 aa10.37□□□□□ -0.75
GYPB-210ENST00000508841 FAM26DQ5JW98 314 aa10.37□□□□□ -0.75
GYPB-210ENST00000508841 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
GYPB-210ENST00000508841 ASB16Q96NS5 453 aa10.37□□□□□ -0.75
GYPB-210ENST00000508841 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
GYPB-210ENST00000508841 RNF225M0QZC1 329 aaPredicted RBP10.36□□□□□ -0.75
GYPB-210ENST00000508841 KCNQ4P56696 695 aa10.36□□□□□ -0.75
GYPB-210ENST00000508841 DNM1Q05193 864 aaKnown RBP10.36□□□□□ -0.75
GYPB-210ENST00000508841 RGL4Q8IZJ4 473 aa10.36□□□□□ -0.75
GYPB-210ENST00000508841 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
GYPB-210ENST00000508841 EDEM1Q92611 657 aa10.36□□□□□ -0.75
GYPB-210ENST00000508841 DMRTB1Q96MA1 342 aa10.36□□□□□ -0.75
GYPB-210ENST00000508841 TRERF1Q96PN7 1200 aa10.36□□□□□ -0.75
GYPB-210ENST00000508841 OPLAHO14841 1288 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 PDGFAP04085 211 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 ATCAYQ86WG3 371 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 GPR152Q8TDT2 470 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 KLRG1Q96E93 195 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 CFHR5Q9BXR6 569 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 ATXN7L1Q9ULK2 861 aaPredicted RBP10.35□□□□□ -0.75
GYPB-210ENST00000508841 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
GYPB-210ENST00000508841 EFSO43281 561 aa10.34□□□□□ -0.75
GYPB-210ENST00000508841 SV2AQ7L0J3 742 aa10.34□□□□□ -0.75
GYPB-210ENST00000508841 EFCC1Q9HA90 598 aa10.34□□□□□ -0.75
GYPB-210ENST00000508841 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
GYPB-210ENST00000508841 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
GYPB-210ENST00000508841 RTCBQ9Y3I0 505 aaKnown RBP10.34□□□□□ -0.75
GYPB-210ENST00000508841 KHNYNO15037 678 aaKnown RBP10.33□□□□□ -0.76
GYPB-210ENST00000508841 THBS1P07996 1170 aa10.33□□□□□ -0.76
GYPB-210ENST00000508841 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
GYPB-210ENST00000508841 DNAJC14Q6Y2X3 702 aaPredicted RBP10.33□□□□□ -0.76
GYPB-210ENST00000508841 GJD3Q8N144 294 aa10.33□□□□□ -0.76
GYPB-210ENST00000508841 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
GYPB-210ENST00000508841 NUDT16Q96DE0 195 aaKnown RBP10.33□□□□□ -0.76
GYPB-210ENST00000508841 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
GYPB-210ENST00000508841 NEFLP07196 543 aa10.32□□□□□ -0.76
GYPB-210ENST00000508841 TNP2Q05952 138 aa10.32□□□□□ -0.76
GYPB-210ENST00000508841 COL19A1Q14993 1142 aa10.32□□□□□ -0.76
GYPB-210ENST00000508841 FAM129BQ96TA1 746 aa10.32□□□□□ -0.76
GYPB-210ENST00000508841 NDFIP2Q9NV92 336 aa10.32□□□□□ -0.76
GYPB-210ENST00000508841 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
GYPB-210ENST00000508841 CDC14CA4D256 554 aa10.31□□□□□ -0.76
GYPB-210ENST00000508841 EGFRP00533 1210 aa10.31□□□□□ -0.76
GYPB-210ENST00000508841 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
GYPB-210ENST00000508841 PDE12Q6L8Q7 609 aaKnown RBP10.31□□□□□ -0.76
GYPB-210ENST00000508841 CMTR1Q8N1G2 835 aaKnown RBP10.31□□□□□ -0.76
GYPB-210ENST00000508841 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
GYPB-210ENST00000508841 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
GYPB-210ENST00000508841 MARK1Q9P0L2 795 aa10.31□□□□□ -0.76
GYPB-210ENST00000508841 DCDC2BA2VCK2 349 aa10.3□□□□□ -0.76
GYPB-210ENST00000508841 BNIP3LO60238 219 aa10.3□□□□□ -0.76
GYPB-210ENST00000508841 FAM182BQ5T319 152 aa10.3□□□□□ -0.76
GYPB-210ENST00000508841 TMC7Q7Z402 723 aa10.3□□□□□ -0.76
GYPB-210ENST00000508841 ANKRD33BA6NCL7 494 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 XKR5Q6UX68 686 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 VWA5B2Q8N398 1253 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 RGS22Q8NE09 1264 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 AMOTL2Q9Y2J4 779 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 KCNMB2Q9Y691 235 aa10.29□□□□□ -0.76
GYPB-210ENST00000508841 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 FGFR3P22607 806 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 FGD1P98174 961 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 KRT76Q01546 638 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 C8orf34Q49A92 452 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
GYPB-210ENST00000508841 XYLBO75191 536 aa10.27□□□□□ -0.77
GYPB-210ENST00000508841 CCINQ13939 588 aa10.27□□□□□ -0.77
GYPB-210ENST00000508841 TREHO43280 583 aa10.26□□□□□ -0.77
GYPB-210ENST00000508841 SFSWAPQ12872 951 aaKnown RBP10.26□□□□□ -0.77
GYPB-210ENST00000508841 ZNF438Q7Z4V0 828 aa10.26□□□□□ -0.77
GYPB-210ENST00000508841 PLCB3Q01970 1234 aa10.25□□□□□ -0.77
GYPB-210ENST00000508841 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
GYPB-210ENST00000508841 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
GYPB-210ENST00000508841 NPAS4Q8IUM7 802 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms