RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 HYPKQ9NX55 129 aa15.77■□□□□ 0.12
CLDND1-218ENST00000508503 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 GLTPD2A6NH11 291 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 ANKRD13DQ6ZTN6 518 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
CLDND1-218ENST00000508503 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
CLDND1-218ENST00000508503 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
CLDND1-218ENST00000508503 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
CLDND1-218ENST00000508503 C8orf58Q8NAV2 365 aa15.75■□□□□ 0.11
CLDND1-218ENST00000508503 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
CLDND1-218ENST00000508503 TAOK3Q9H2K8 898 aa15.75■□□□□ 0.11
CLDND1-218ENST00000508503 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
CLDND1-218ENST00000508503 CACNA1SQ13698 1873 aa15.75■□□□□ 0.11
CLDND1-218ENST00000508503 IL16Q14005 1332 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 CCDC93Q567U6 631 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 RTKN2Q8IZC4 609 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 ISCA1Q9BUE6 129 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 CHMP4AQ9BY43 222 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 ANKRD36CQ5JPF3 1778 aa15.74■□□□□ 0.11
CLDND1-218ENST00000508503 SENP3-EIF4A1A0A087X0R7 540 aa15.73■□□□□ 0.11
CLDND1-218ENST00000508503 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
CLDND1-218ENST00000508503 C3orf67Q6ZVT6 689 aa15.73■□□□□ 0.11
CLDND1-218ENST00000508503 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
CLDND1-218ENST00000508503 RRAGCQ9HB90 399 aa15.73■□□□□ 0.11
CLDND1-218ENST00000508503 POTECB2RU33 542 aa15.72■□□□□ 0.11
CLDND1-218ENST00000508503 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-218ENST00000508503 HSPA6P17066 643 aa15.72■□□□□ 0.11
CLDND1-218ENST00000508503 FKBP4Q02790 459 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLDND1-218ENST00000508503 GRIPAP1Q4V328 841 aa15.72■□□□□ 0.11
CLDND1-218ENST00000508503 OLFM4Q6UX06 510 aa15.72■□□□□ 0.11
CLDND1-218ENST00000508503 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
CLDND1-218ENST00000508503 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
CLDND1-218ENST00000508503 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
CLDND1-218ENST00000508503 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
CLDND1-218ENST00000508503 TSPYL6Q8N831 410 aa15.71■□□□□ 0.11
CLDND1-218ENST00000508503 RPGRQ92834 1020 aaKnown RBP15.71■□□□□ 0.11
CLDND1-218ENST00000508503 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
CLDND1-218ENST00000508503 PHAXQ9H814 394 aaKnown RBP15.71■□□□□ 0.11
CLDND1-218ENST00000508503 CCDC30Q5VVM6 783 aa15.7■□□□□ 0.1
CLDND1-218ENST00000508503 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
CLDND1-218ENST00000508503 PSMD1Q99460 953 aa15.7■□□□□ 0.1
CLDND1-218ENST00000508503 TRMT112Q9UI30 125 aaKnown RBP15.7■□□□□ 0.1
CLDND1-218ENST00000508503 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
CLDND1-218ENST00000508503 TIAM2Q8IVF5 1701 aa15.69■□□□□ 0.1
CLDND1-218ENST00000508503 BBOX1O75936 387 aa15.68■□□□□ 0.1
CLDND1-218ENST00000508503 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
CLDND1-218ENST00000508503 FSTL1Q12841 308 aa15.68■□□□□ 0.1
CLDND1-218ENST00000508503 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
CLDND1-218ENST00000508503 WDR90Q96KV7 1748 aa15.68■□□□□ 0.1
CLDND1-218ENST00000508503 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
CLDND1-218ENST00000508503 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
CLDND1-218ENST00000508503 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
CLDND1-218ENST00000508503 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
CLDND1-218ENST00000508503 LAMB2P55268 1798 aa15.67■□□□□ 0.1
CLDND1-218ENST00000508503 FZD9O00144 591 aa15.66■□□□□ 0.1
CLDND1-218ENST00000508503 IARSP41252 1262 aaKnown RBP15.66■□□□□ 0.1
CLDND1-218ENST00000508503 RIC3Q7Z5B4 369 aa15.66■□□□□ 0.1
CLDND1-218ENST00000508503 C16orf71Q8IYS4 520 aaPredicted RBP15.66■□□□□ 0.1
CLDND1-218ENST00000508503 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
CLDND1-218ENST00000508503 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-218ENST00000508503 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-218ENST00000508503 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
CLDND1-218ENST00000508503 TWISTNBQ3B726 338 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-218ENST00000508503 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
CLDND1-218ENST00000508503 L3MBTL3Q96JM7 780 aaPredicted RBP15.65■□□□□ 0.1
CLDND1-218ENST00000508503 VPS33BQ9H267 617 aa15.65■□□□□ 0.1
CLDND1-218ENST00000508503 ABCC4O15439 1325 aa15.65■□□□□ 0.1
CLDND1-218ENST00000508503 CCDC191Q8NCU4 936 aa15.64■□□□□ 0.09
CLDND1-218ENST00000508503 METTL22Q9BUU2 404 aaPredicted RBP15.64■□□□□ 0.09
CLDND1-218ENST00000508503 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
CLDND1-218ENST00000508503 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
CLDND1-218ENST00000508503 VAMP4O75379 141 aa15.63■□□□□ 0.09
CLDND1-218ENST00000508503 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
CLDND1-218ENST00000508503 APLP1P51693 650 aa15.63■□□□□ 0.09
CLDND1-218ENST00000508503 GRAPQ13588 217 aa15.63■□□□□ 0.09
CLDND1-218ENST00000508503 KSR2Q6VAB6 950 aa15.63■□□□□ 0.09
CLDND1-218ENST00000508503 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
CLDND1-218ENST00000508503 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
CLDND1-218ENST00000508503 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
CLDND1-218ENST00000508503 GRAPLQ8TC17 118 aaPredicted RBP15.63■□□□□ 0.09
CLDND1-218ENST00000508503 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
CLDND1-218ENST00000508503 TMC4Q7Z404 712 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 FAM9BQ8IZU0 186 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 DNAJC5GQ8N7S2 189 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 MYD88Q99836 296 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
CLDND1-218ENST00000508503 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 CACNA1FO60840 1977 aa15.62■□□□□ 0.09
CLDND1-218ENST00000508503 PI4KAP2A4QPH2 592 aa15.61■□□□□ 0.09
CLDND1-218ENST00000508503 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
CLDND1-218ENST00000508503 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
CLDND1-218ENST00000508503 G2E3Q7L622 706 aa15.61■□□□□ 0.09
CLDND1-218ENST00000508503 PI4KAP1Q8N8J0 262 aa15.61■□□□□ 0.09
CLDND1-218ENST00000508503 STK31Q9BXU1 1019 aa15.61■□□□□ 0.09
CLDND1-218ENST00000508503 TAF1P21675 1872 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms