RNA–Protein interactions for RNA: ENST00000508322.1

PROM1-208, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-208ENST00000508322 GOLGA2Q08379 1002 aa31.42■■■□□ 2.62
PROM1-208ENST00000508322 SBF1O95248 1867 aa31.42■■■□□ 2.62
PROM1-208ENST00000508322 CACNA1SQ13698 1873 aa31.42■■■□□ 2.62
PROM1-208ENST00000508322 RIC3Q7Z5B4 369 aa31.41■■■□□ 2.62
PROM1-208ENST00000508322 NLRP3Q96P20 1036 aa31.41■■■□□ 2.62
PROM1-208ENST00000508322 RNF123Q5XPI4 1314 aa31.41■■■□□ 2.62
PROM1-208ENST00000508322 NFKBIEO00221 500 aa31.4■■■□□ 2.62
PROM1-208ENST00000508322 CRY2Q49AN0 593 aa31.4■■■□□ 2.62
PROM1-208ENST00000508322 PHAXQ9H814 394 aaKnown RBP31.4■■■□□ 2.62
PROM1-208ENST00000508322 TRMT112Q9UI30 125 aaKnown RBP31.4■■■□□ 2.62
PROM1-208ENST00000508322 ANKRD36CQ5JPF3 1778 aa31.39■■■□□ 2.62
PROM1-208ENST00000508322 TWISTNBQ3B726 338 aaPredicted RBP31.39■■■□□ 2.62
PROM1-208ENST00000508322 STK31Q9BXU1 1019 aa31.39■■■□□ 2.62
PROM1-208ENST00000508322 RIC1Q4ADV7 1423 aa31.39■■■□□ 2.62
PROM1-208ENST00000508322 C1QTNF8P60827 252 aa31.38■■■□□ 2.61
PROM1-208ENST00000508322 SLC10A5Q5PT55 438 aa31.38■■■□□ 2.61
PROM1-208ENST00000508322 RBM17Q96I25 401 aaKnown RBP31.38■■■□□ 2.61
PROM1-208ENST00000508322 TAOK3Q9H2K8 898 aa31.38■■■□□ 2.61
PROM1-208ENST00000508322 ARFGEF2Q9Y6D5 1785 aa31.38■■■□□ 2.61
PROM1-208ENST00000508322 CCDC93Q567U6 631 aa31.37■■■□□ 2.61
PROM1-208ENST00000508322 TNRC6CQ9HCJ0 1690 aaKnown RBP31.36■■■□□ 2.61
PROM1-208ENST00000508322 DDX58O95786 925 aaKnown RBP31.36■■■□□ 2.61
PROM1-208ENST00000508322 C7orf43Q8WVR3 580 aa31.36■■■□□ 2.61
PROM1-208ENST00000508322 SH3TC1Q8TE82 1336 aa31.35■■■□□ 2.61
PROM1-208ENST00000508322 FANCIQ9NVI1 1328 aa31.35■■■□□ 2.61
PROM1-208ENST00000508322 ATP5J2-PTCD1G3V325 749 aa31.35■■■□□ 2.61
PROM1-208ENST00000508322 HOXA10P31260 410 aaPredicted RBP31.35■■■□□ 2.61
PROM1-208ENST00000508322 ISCA1Q9BUE6 129 aa31.35■■■□□ 2.61
PROM1-208ENST00000508322 KDM2BQ8NHM5 1336 aa31.34■■■□□ 2.61
PROM1-208ENST00000508322 LTBP3Q9NS15 1303 aa31.34■■■□□ 2.61
PROM1-208ENST00000508322 ZC3H4Q9UPT8 1303 aaKnown RBP31.34■■■□□ 2.61
PROM1-208ENST00000508322 PRELPP51888 382 aa31.33■■■□□ 2.61
PROM1-208ENST00000508322 RTKN2Q8IZC4 609 aa31.33■■■□□ 2.61
PROM1-208ENST00000508322 CRAMP1Q96RY5 1269 aa31.33■■■□□ 2.61
PROM1-208ENST00000508322 FER1L6Q2WGJ9 1857 aa31.33■■■□□ 2.61
PROM1-208ENST00000508322 CCDC88AQ3V6T2 1871 aa31.33■■■□□ 2.61
PROM1-208ENST00000508322 TCERG1O14776 1098 aaKnown RBP31.32■■■□□ 2.6
PROM1-208ENST00000508322 HCLS1P14317 486 aaPredicted RBP31.32■■■□□ 2.6
PROM1-208ENST00000508322 ZNF428Q96B54 188 aa31.32■■■□□ 2.6
PROM1-208ENST00000508322 MYH16Q9H6N6 1097 aa31.32■■■□□ 2.6
PROM1-208ENST00000508322 C3orf67Q6ZVT6 689 aa31.31■■■□□ 2.6
PROM1-208ENST00000508322 SYNE4Q8N205 404 aa31.31■■■□□ 2.6
PROM1-208ENST00000508322 TRIM28Q13263 835 aaKnown RBP31.3■■■□□ 2.6
PROM1-208ENST00000508322 CC2D2BQ6DHV5 1058 aa31.29■■■□□ 2.6
PROM1-208ENST00000508322 MYD88Q99836 296 aa31.29■■■□□ 2.6
PROM1-208ENST00000508322 KIF3CO14782 793 aa31.28■■■□□ 2.6
PROM1-208ENST00000508322 SLC4A2P04920 1241 aa31.28■■■□□ 2.6
PROM1-208ENST00000508322 FKBP4Q02790 459 aaKnown RBP eCLIP31.28■■■□□ 2.6
PROM1-208ENST00000508322 EXOSC9Q06265 439 aaKnown RBP31.28■■■□□ 2.6
PROM1-208ENST00000508322 OLFM4Q6UX06 510 aa31.28■■■□□ 2.6
PROM1-208ENST00000508322 FAM89AQ96GI7 184 aa31.28■■■□□ 2.6
PROM1-208ENST00000508322 TMX4Q9H1E5 349 aaPredicted RBP31.28■■■□□ 2.6
PROM1-208ENST00000508322 NMRK2Q9NPI5 230 aa31.28■■■□□ 2.6
PROM1-208ENST00000508322 CCER2I3L3R5 266 aa31.27■■■□□ 2.6
PROM1-208ENST00000508322 PPEF1O14829 653 aaPredicted RBP31.26■■■□□ 2.59
PROM1-208ENST00000508322 DPY19L2Q6NUT2 758 aa31.26■■■□□ 2.59
PROM1-208ENST00000508322 METTL22Q9BUU2 404 aaPredicted RBP31.26■■■□□ 2.59
PROM1-208ENST00000508322 VAMP4O75379 141 aa31.25■■■□□ 2.59
PROM1-208ENST00000508322 GRIPAP1Q4V328 841 aa31.25■■■□□ 2.59
PROM1-208ENST00000508322 KSR2Q6VAB6 950 aa31.25■■■□□ 2.59
PROM1-208ENST00000508322 DDX46Q7L014 1031 aaKnown RBP31.25■■■□□ 2.59
PROM1-208ENST00000508322 SPINK5Q9NQ38 1064 aaPredicted RBP31.25■■■□□ 2.59
PROM1-208ENST00000508322 MAP3K2Q9Y2U5 619 aa31.25■■■□□ 2.59
PROM1-208ENST00000508322 GLTPD2A6NH11 291 aa31.24■■■□□ 2.59
PROM1-208ENST00000508322 RTL5Q5HYW3 569 aaPredicted RBP31.24■■■□□ 2.59
PROM1-208ENST00000508322 C16orf71Q8IYS4 520 aaPredicted RBP31.23■■■□□ 2.59
PROM1-208ENST00000508322 CCDC191Q8NCU4 936 aa31.23■■■□□ 2.59
PROM1-208ENST00000508322 RRAGCQ9HB90 399 aa31.23■■■□□ 2.59
PROM1-208ENST00000508322 PI4KAP2A4QPH2 592 aa31.22■■■□□ 2.59
PROM1-208ENST00000508322 HSP90B1P14625 803 aaKnown RBP31.22■■■□□ 2.59
PROM1-208ENST00000508322 PI4KAP1Q8N8J0 262 aa31.22■■■□□ 2.59
PROM1-208ENST00000508322 ZNF277Q9NRM2 450 aaPredicted RBP31.22■■■□□ 2.59
PROM1-208ENST00000508322 CWC25Q9NXE8 425 aaPredicted RBP31.22■■■□□ 2.59
PROM1-208ENST00000508322 DICER1Q9UPY3 1922 aaKnown RBP31.22■■■□□ 2.59
PROM1-208ENST00000508322 IRS4O14654 1257 aaPredicted RBP31.21■■■□□ 2.59
PROM1-208ENST00000508322 BBOX1O75936 387 aa31.21■■■□□ 2.59
PROM1-208ENST00000508322 NEXNQ0ZGT2 675 aa31.21■■■□□ 2.59
PROM1-208ENST00000508322 ZBTB38Q8NAP3 1195 aaPredicted RBP31.21■■■□□ 2.59
PROM1-208ENST00000508322 ABCC4O15439 1325 aa31.21■■■□□ 2.59
PROM1-208ENST00000508322 TIAM2Q8IVF5 1701 aa31.21■■■□□ 2.59
PROM1-208ENST00000508322 G2E3Q7L622 706 aa31.2■■■□□ 2.59
PROM1-208ENST00000508322 PSMD1Q99460 953 aa31.2■■■□□ 2.59
PROM1-208ENST00000508322 ATP6V0A2Q9Y487 856 aa31.19■■■□□ 2.58
PROM1-208ENST00000508322 LAMB2P55268 1798 aa31.18■■■□□ 2.58
PROM1-208ENST00000508322 TOMM70O94826 608 aa31.18■■■□□ 2.58
PROM1-208ENST00000508322 FLIIQ13045 1269 aa31.18■■■□□ 2.58
PROM1-208ENST00000508322 IARSP41252 1262 aaKnown RBP31.17■■■□□ 2.58
PROM1-208ENST00000508322 GRAPQ13588 217 aa31.17■■■□□ 2.58
PROM1-208ENST00000508322 SF3B3Q15393 1217 aaKnown RBP31.17■■■□□ 2.58
PROM1-208ENST00000508322 GRAPLQ8TC17 118 aaPredicted RBP31.17■■■□□ 2.58
PROM1-208ENST00000508322 ZNF521Q96K83 1311 aa31.17■■■□□ 2.58
PROM1-208ENST00000508322 PCCAP05165 728 aaPredicted RBP31.16■■■□□ 2.58
PROM1-208ENST00000508322 FKBP5Q13451 457 aaPredicted RBP31.16■■■□□ 2.58
PROM1-208ENST00000508322 VEGFAP15692 232 aaPredicted RBP31.15■■■□□ 2.58
PROM1-208ENST00000508322 SP8Q8IXZ3 490 aa31.15■■■□□ 2.58
PROM1-208ENST00000508322 CACNA1FO60840 1977 aa31.15■■■□□ 2.58
PROM1-208ENST00000508322 DDX60Q8IY21 1712 aaKnown RBP31.13■■■□□ 2.57
PROM1-208ENST00000508322 TMC4Q7Z404 712 aa31.13■■■□□ 2.57
PROM1-208ENST00000508322 JDP2Q8WYK2 163 aa31.13■■■□□ 2.57
PROM1-208ENST00000508322 PDE8AO60658 829 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms