RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NEURL1BA8MQ27 555 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 MICAL2O94851 1124 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 SSFA2P28290 1259 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 ADH6P28332 368 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 GRNP28799 593 aaKnown RBP9.95□□□□□ -0.82
DHFR-204ENST00000508282 INPP5BP32019 993 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 SCNN1AP37088 669 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 IDH3AP50213 366 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 PCBP4P57723 403 aaKnown RBP9.95□□□□□ -0.82
DHFR-204ENST00000508282 SPEM2Q0P670 501 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 GALNT6Q8NCL4 622 aa9.95□□□□□ -0.82
DHFR-204ENST00000508282 DNMT3AQ9Y6K1 912 aaPredicted RBP9.95□□□□□ -0.82
DHFR-204ENST00000508282 TNFRSF10BO14763 440 aa9.94□□□□□ -0.82
DHFR-204ENST00000508282 FCHSD1Q86WN1 690 aa9.94□□□□□ -0.82
DHFR-204ENST00000508282 EDARADDQ8WWZ3 215 aa9.94□□□□□ -0.82
DHFR-204ENST00000508282 ENAMQ9NRM1 1142 aa9.94□□□□□ -0.82
DHFR-204ENST00000508282 SEPT3Q9UH03 358 aa9.94□□□□□ -0.82
DHFR-204ENST00000508282 FAM26DQ5JW98 314 aa9.93□□□□□ -0.82
DHFR-204ENST00000508282 RAB44Q7Z6P3 723 aaPredicted RBP9.93□□□□□ -0.82
DHFR-204ENST00000508282 SYT9Q86SS6 491 aa9.93□□□□□ -0.82
DHFR-204ENST00000508282 ETFBKMTQ8IXQ9 262 aa9.93□□□□□ -0.82
DHFR-204ENST00000508282 OPLAHO14841 1288 aa9.92□□□□□ -0.82
DHFR-204ENST00000508282 EPXP11678 715 aa9.92□□□□□ -0.82
DHFR-204ENST00000508282 PHLDB3Q6NSJ2 640 aa9.92□□□□□ -0.82
DHFR-204ENST00000508282 NEDD1Q8NHV4 660 aa9.92□□□□□ -0.82
DHFR-204ENST00000508282 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
DHFR-204ENST00000508282 TREML1Q86YW5 311 aa9.91□□□□□ -0.82
DHFR-204ENST00000508282 BRD2P25440 801 aaKnown RBP9.9□□□□□ -0.82
DHFR-204ENST00000508282 ARSDP51689 593 aa9.9□□□□□ -0.82
DHFR-204ENST00000508282 GSX2Q9BZM3 304 aa9.9□□□□□ -0.82
DHFR-204ENST00000508282 SIN3BO75182 1162 aa9.89□□□□□ -0.83
DHFR-204ENST00000508282 MARSP56192 900 aaKnown RBP9.89□□□□□ -0.83
DHFR-204ENST00000508282 RETREG2Q8NC44 543 aa9.89□□□□□ -0.83
DHFR-204ENST00000508282 MDFIQ99750 246 aa9.89□□□□□ -0.83
DHFR-204ENST00000508282 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
DHFR-204ENST00000508282 EPB42P16452 691 aa9.88□□□□□ -0.83
DHFR-204ENST00000508282 BHMTQ93088 406 aa9.88□□□□□ -0.83
DHFR-204ENST00000508282 BTBD6Q96KE9 485 aa9.88□□□□□ -0.83
DHFR-204ENST00000508282 HOXB4P17483 251 aaPredicted RBP9.87□□□□□ -0.83
DHFR-204ENST00000508282 NEUROD1Q13562 356 aa9.87□□□□□ -0.83
DHFR-204ENST00000508282 STIM2Q9P246 746 aa9.87□□□□□ -0.83
DHFR-204ENST00000508282 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
DHFR-204ENST00000508282 ZBTB39O15060 712 aa9.86□□□□□ -0.83
DHFR-204ENST00000508282 SNRPNP63162 240 aaKnown RBP9.86□□□□□ -0.83
DHFR-204ENST00000508282 CCINQ13939 588 aa9.86□□□□□ -0.83
DHFR-204ENST00000508282 RGL4Q8IZJ4 473 aa9.86□□□□□ -0.83
DHFR-204ENST00000508282 TNFRSF25Q93038 417 aa9.86□□□□□ -0.83
DHFR-204ENST00000508282 CNTNAP5Q8WYK1 1306 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 ELOA3CA0A087WX78 387 aaPredicted RBP9.85□□□□□ -0.83
DHFR-204ENST00000508282 ELOA3DA6NLF2 546 aaPredicted RBP9.85□□□□□ -0.83
DHFR-204ENST00000508282 ADARB2-AS1A8MUL3 147 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 AMPD1P23109 780 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 GSK3AP49840 483 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 ELOA3BQ3SY89 546 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 CHSY3Q70JA7 882 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 ELOA3Q8NG57 546 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 EFCC1Q9HA90 598 aa9.85□□□□□ -0.83
DHFR-204ENST00000508282 NFKB1P19838 968 aa9.84□□□□□ -0.83
DHFR-204ENST00000508282 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
DHFR-204ENST00000508282 GTF3C2Q8WUA4 911 aaPredicted RBP9.84□□□□□ -0.83
DHFR-204ENST00000508282 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
DHFR-204ENST00000508282 C11orf16Q9NQ32 467 aa9.84□□□□□ -0.83
DHFR-204ENST00000508282 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.84□□□□□ -0.83
DHFR-204ENST00000508282 KCNMB2Q9Y691 235 aa9.84□□□□□ -0.83
DHFR-204ENST00000508282 CMTR1Q8N1G2 835 aaKnown RBP9.83□□□□□ -0.84
DHFR-204ENST00000508282 PNMA5Q96PV4 448 aa9.83□□□□□ -0.84
DHFR-204ENST00000508282 RRAGCQ9HB90 399 aa9.83□□□□□ -0.84
DHFR-204ENST00000508282 ZFATQ9P243 1243 aa9.83□□□□□ -0.84
DHFR-204ENST00000508282 ADH7P40394 386 aa9.82□□□□□ -0.84
DHFR-204ENST00000508282 ZAP70P43403 619 aa9.82□□□□□ -0.84
DHFR-204ENST00000508282 KCNMA1Q12791 1236 aa9.82□□□□□ -0.84
DHFR-204ENST00000508282 KRT25Q7Z3Z0 450 aa9.82□□□□□ -0.84
DHFR-204ENST00000508282 BEND7Q8N7W2 519 aaPredicted RBP9.82□□□□□ -0.84
DHFR-204ENST00000508282 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
DHFR-204ENST00000508282 SASH3O75995 380 aa9.81□□□□□ -0.84
DHFR-204ENST00000508282 EGFRP00533 1210 aa9.81□□□□□ -0.84
DHFR-204ENST00000508282 TARSP26639 723 aaKnown RBP9.81□□□□□ -0.84
DHFR-204ENST00000508282 DGKGP49619 791 aa9.81□□□□□ -0.84
DHFR-204ENST00000508282 MTMR3Q13615 1198 aa9.81□□□□□ -0.84
DHFR-204ENST00000508282 TRIP4Q15650 581 aaPredicted RBP9.81□□□□□ -0.84
DHFR-204ENST00000508282 LINC00114Q6XXX2 140 aa9.81□□□□□ -0.84
DHFR-204ENST00000508282 RNF225M0QZC1 329 aaPredicted RBP9.8□□□□□ -0.84
DHFR-204ENST00000508282 XYLBO75191 536 aa9.8□□□□□ -0.84
DHFR-204ENST00000508282 ALAS2P22557 587 aa9.8□□□□□ -0.84
DHFR-204ENST00000508282 IRS1P35568 1242 aa9.8□□□□□ -0.84
DHFR-204ENST00000508282 PODNQ7Z5L7 613 aa9.8□□□□□ -0.84
DHFR-204ENST00000508282 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
DHFR-204ENST00000508282 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
DHFR-204ENST00000508282 STARD13Q9Y3M8 1113 aa9.8□□□□□ -0.84
DHFR-204ENST00000508282 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
DHFR-204ENST00000508282 MPSTP25325 297 aa9.79□□□□□ -0.84
DHFR-204ENST00000508282 TBC1D8BQ0IIM8 1120 aa9.79□□□□□ -0.84
DHFR-204ENST00000508282 B4GALNT3Q6L9W6 998 aa9.79□□□□□ -0.84
DHFR-204ENST00000508282 ATCAYQ86WG3 371 aa9.79□□□□□ -0.84
DHFR-204ENST00000508282 GPR152Q8TDT2 470 aa9.79□□□□□ -0.84
DHFR-204ENST00000508282 RARAP10276 462 aa9.78□□□□□ -0.84
DHFR-204ENST00000508282 PIK3R5Q8WYR1 880 aa9.78□□□□□ -0.84
DHFR-204ENST00000508282 DNAJB12Q9NXW2 375 aaKnown RBP9.78□□□□□ -0.84
DHFR-204ENST00000508282 MKL2Q9ULH7 1088 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms