RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MYD88Q99836 296 aa19.13■□□□□ 0.65
RNF4-210ENST00000508235 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
RNF4-210ENST00000508235 ADCY9O60503 1353 aa19.13■□□□□ 0.65
RNF4-210ENST00000508235 RIC1Q4ADV7 1423 aa19.13■□□□□ 0.65
RNF4-210ENST00000508235 SH3TC1Q8TE82 1336 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 ATP5J2-PTCD1G3V325 749 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 KCNA3P22001 575 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 CHRNA5P30532 468 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 ERFEQ4G0M1 354 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 CCDC24Q8N4L8 307 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 CCDC191Q8NCU4 936 aa19.12■□□□□ 0.65
RNF4-210ENST00000508235 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
RNF4-210ENST00000508235 DNAAF4Q8WXU2 420 aa19.11■□□□□ 0.65
RNF4-210ENST00000508235 PTPRCP08575 1304 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 ARFGEF1Q9Y6D6 1849 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 KLRG2A4D1S0 409 aaPredicted RBP19.1■□□□□ 0.65
RNF4-210ENST00000508235 SRGNP10124 158 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 SLC10A5Q5PT55 438 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 STYK1Q6J9G0 422 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 MRPL50Q8N5N7 158 aaKnown RBP19.1■□□□□ 0.65
RNF4-210ENST00000508235 SSH1Q8WYL5 1049 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 SMC4Q9NTJ3 1288 aa19.1■□□□□ 0.65
RNF4-210ENST00000508235 CWC25Q9NXE8 425 aaPredicted RBP19.1■□□□□ 0.65
RNF4-210ENST00000508235 COL11A2P13942 1736 aaPredicted RBP19.1■□□□□ 0.65
RNF4-210ENST00000508235 ABCC12Q96J65 1359 aa19.09■□□□□ 0.65
RNF4-210ENST00000508235 DALRD3Q5D0E6 543 aaKnown RBP19.09■□□□□ 0.65
RNF4-210ENST00000508235 TTLL6Q8N841 843 aa19.09■□□□□ 0.65
RNF4-210ENST00000508235 CNKSR1Q969H4 720 aa19.09■□□□□ 0.65
RNF4-210ENST00000508235 MASTLQ96GX5 879 aa19.09■□□□□ 0.65
RNF4-210ENST00000508235 NLRP3Q96P20 1036 aa19.09■□□□□ 0.65
RNF4-210ENST00000508235 BCS1LQ9Y276 419 aa19.09■□□□□ 0.65
RNF4-210ENST00000508235 NPR1P16066 1061 aa19.08■□□□□ 0.64
RNF4-210ENST00000508235 YBX3P16989 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
RNF4-210ENST00000508235 ZBTB38Q8NAP3 1195 aaPredicted RBP19.08■□□□□ 0.64
RNF4-210ENST00000508235 ZNF622Q969S3 477 aaKnown RBP eCLIP19.08■□□□□ 0.64
RNF4-210ENST00000508235 TNRC6CQ9HCJ0 1690 aaKnown RBP19.08■□□□□ 0.64
RNF4-210ENST00000508235 BRPF1P55201 1214 aaPredicted RBP19.07■□□□□ 0.64
RNF4-210ENST00000508235 LINS1Q8NG48 757 aa19.07■□□□□ 0.64
RNF4-210ENST00000508235 BCL2L13Q9BXK5 485 aa19.07■□□□□ 0.64
RNF4-210ENST00000508235 WWC3Q9ULE0 1092 aa19.07■□□□□ 0.64
RNF4-210ENST00000508235 LAMB2P55268 1798 aa19.06■□□□□ 0.64
RNF4-210ENST00000508235 NEURL1BA8MQ27 555 aa19.06■□□□□ 0.64
RNF4-210ENST00000508235 PCCAP05165 728 aaPredicted RBP19.06■□□□□ 0.64
RNF4-210ENST00000508235 ALDH1B1P30837 517 aa19.06■□□□□ 0.64
RNF4-210ENST00000508235 RARSP54136 660 aaKnown RBP19.06■□□□□ 0.64
RNF4-210ENST00000508235 CRY2Q49AN0 593 aa19.06■□□□□ 0.64
RNF4-210ENST00000508235 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
RNF4-210ENST00000508235 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
RNF4-210ENST00000508235 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
RNF4-210ENST00000508235 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
RNF4-210ENST00000508235 DDX60Q8IY21 1712 aaKnown RBP19.05■□□□□ 0.64
RNF4-210ENST00000508235 KIF16BQ96L93 1317 aa19.04■□□□□ 0.64
RNF4-210ENST00000508235 CHD4Q14839 1912 aa19.04■□□□□ 0.64
RNF4-210ENST00000508235 F6X3S4 739 aa19.04■□□□□ 0.64
RNF4-210ENST00000508235 CWF19L2Q2TBE0 894 aaKnown RBP19.04■□□□□ 0.64
RNF4-210ENST00000508235 IRS4O14654 1257 aaPredicted RBP19.03■□□□□ 0.64
RNF4-210ENST00000508235 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
RNF4-210ENST00000508235 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
RNF4-210ENST00000508235 CDHR2Q9BYE9 1310 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 ALDH1L1O75891 902 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 HOXA10P31260 410 aaPredicted RBP19.02■□□□□ 0.64
RNF4-210ENST00000508235 GCKRQ14397 625 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.64
RNF4-210ENST00000508235 BEND3Q5T5X7 828 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 SOGA3Q5TF21 947 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 SLC4A10Q6U841 1118 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 SYNE4Q8N205 404 aa19.02■□□□□ 0.64
RNF4-210ENST00000508235 IPO8O15397 1037 aaKnown RBP19.01■□□□□ 0.63
RNF4-210ENST00000508235 PRPF40BQ6NWY9 871 aaKnown RBP19.01■□□□□ 0.63
RNF4-210ENST00000508235 ARHGAP45Q92619 1136 aa19.01■□□□□ 0.63
RNF4-210ENST00000508235 CRAMP1Q96RY5 1269 aa19.01■□□□□ 0.63
RNF4-210ENST00000508235 API5Q9BZZ5 524 aaKnown RBP19.01■□□□□ 0.63
RNF4-210ENST00000508235 SRCIN1Q9C0H9 1055 aa19.01■□□□□ 0.63
RNF4-210ENST00000508235 NOB1Q9ULX3 412 aaKnown RBP19.01■□□□□ 0.63
RNF4-210ENST00000508235 MYH3P11055 1940 aa19.01■□□□□ 0.63
RNF4-210ENST00000508235 SLX4Q8IY92 1834 aa19■□□□□ 0.63
RNF4-210ENST00000508235 H7C1W4 665 aa19■□□□□ 0.63
RNF4-210ENST00000508235 PDE8AO60658 829 aa19■□□□□ 0.63
RNF4-210ENST00000508235 SF3B3Q15393 1217 aaKnown RBP18.99■□□□□ 0.63
RNF4-210ENST00000508235 ARHGAP27Q6ZUM4 889 aa18.99■□□□□ 0.63
RNF4-210ENST00000508235 DDX46Q7L014 1031 aaKnown RBP18.99■□□□□ 0.63
RNF4-210ENST00000508235 UBE3BQ7Z3V4 1068 aa18.99■□□□□ 0.63
RNF4-210ENST00000508235 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
RNF4-210ENST00000508235 C21orf2O43822 256 aa18.97■□□□□ 0.63
RNF4-210ENST00000508235 TMX4Q9H1E5 349 aaPredicted RBP18.97■□□□□ 0.63
RNF4-210ENST00000508235 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
RNF4-210ENST00000508235 GRM8O00222 908 aa18.96■□□□□ 0.63
RNF4-210ENST00000508235 CCT4P50991 539 aaKnown RBP18.96■□□□□ 0.63
RNF4-210ENST00000508235 CCDC152Q4G0S7 254 aa18.96■□□□□ 0.63
RNF4-210ENST00000508235 GRIPAP1Q4V328 841 aa18.96■□□□□ 0.63
RNF4-210ENST00000508235 CC2D2BQ6DHV5 1058 aa18.96■□□□□ 0.63
RNF4-210ENST00000508235 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
RNF4-210ENST00000508235 BCAR3O75815 825 aa18.95■□□□□ 0.62
RNF4-210ENST00000508235 BBOX1O75936 387 aa18.95■□□□□ 0.62
RNF4-210ENST00000508235 GRAPQ13588 217 aa18.95■□□□□ 0.62
RNF4-210ENST00000508235 CCDC93Q567U6 631 aa18.95■□□□□ 0.62
RNF4-210ENST00000508235 TMC4Q7Z404 712 aa18.95■□□□□ 0.62
RNF4-210ENST00000508235 GRAPLQ8TC17 118 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms