RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 SH3PXD2AQ5TCZ1 1133 aa8.9□□□□□ -0.98
SPCS3-202ENST00000507001 PBXIP1Q96AQ6 731 aa8.9□□□□□ -0.98
SPCS3-202ENST00000507001 EFCC1Q9HA90 598 aa8.9□□□□□ -0.98
SPCS3-202ENST00000507001 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
SPCS3-202ENST00000507001 TYRO3Q06418 890 aa8.89□□□□□ -0.99
SPCS3-202ENST00000507001 TBCELQ5QJ74 424 aa8.89□□□□□ -0.99
SPCS3-202ENST00000507001 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
SPCS3-202ENST00000507001 DEPDC4Q8N2C3 294 aa8.89□□□□□ -0.99
SPCS3-202ENST00000507001 TPCN2Q8NHX9 752 aa8.89□□□□□ -0.99
SPCS3-202ENST00000507001 KCNH4Q9UQ05 1017 aa8.89□□□□□ -0.99
SPCS3-202ENST00000507001 SRPK2P78362 688 aaKnown RBP8.88□□□□□ -0.99
SPCS3-202ENST00000507001 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
SPCS3-202ENST00000507001 CEP63Q96MT8 703 aa8.88□□□□□ -0.99
SPCS3-202ENST00000507001 TSPAN10Q9H1Z9 355 aaPredicted RBP8.88□□□□□ -0.99
SPCS3-202ENST00000507001 KIAA1024Q9UPX6 916 aa8.88□□□□□ -0.99
SPCS3-202ENST00000507001 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
SPCS3-202ENST00000507001 CLDN10P78369 228 aa8.87□□□□□ -0.99
SPCS3-202ENST00000507001 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
SPCS3-202ENST00000507001 SIX5Q8N196 739 aa8.87□□□□□ -0.99
SPCS3-202ENST00000507001 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
SPCS3-202ENST00000507001 PHACTR1Q9C0D0 580 aa8.87□□□□□ -0.99
SPCS3-202ENST00000507001 C9orf172C9J069 976 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 LILRB5O75023 590 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 HIF1AQ16665 826 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
SPCS3-202ENST00000507001 CDCA8Q53HL2 280 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
SPCS3-202ENST00000507001 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 HSH2DQ96JZ2 352 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 SUSD3Q96L08 255 aa8.86□□□□□ -0.99
SPCS3-202ENST00000507001 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
SPCS3-202ENST00000507001 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
SPCS3-202ENST00000507001 CARNS1A5YM72 827 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 SFI1A8K8P3 1242 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 H2AFB1P0C5Y9 115 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 ELNP15502 786 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 ADGRE1Q14246 886 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 GRIK4Q16099 956 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
SPCS3-202ENST00000507001 VRTNQ9H8Y1 702 aa8.84□□□□□ -0.99
SPCS3-202ENST00000507001 NRG1Q02297 640 aaPredicted RBP8.83□□□□□ -1
SPCS3-202ENST00000507001 IER5Q5VY09 327 aa8.83□□□□□ -1
SPCS3-202ENST00000507001 OGFOD1Q8N543 542 aa8.83□□□□□ -1
SPCS3-202ENST00000507001 ZNF280CQ8ND82 737 aa8.83□□□□□ -1
SPCS3-202ENST00000507001 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
SPCS3-202ENST00000507001 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
SPCS3-202ENST00000507001 HCN4Q9Y3Q4 1203 aa8.83□□□□□ -1
SPCS3-202ENST00000507001 A0A0A0MRY4 1105 aa8.82□□□□□ -1
SPCS3-202ENST00000507001 DKK1O94907 266 aa8.82□□□□□ -1
SPCS3-202ENST00000507001 MBTPS1Q14703 1052 aa8.82□□□□□ -1
SPCS3-202ENST00000507001 ARTNQ5T4W7 220 aa8.82□□□□□ -1
SPCS3-202ENST00000507001 KANK4Q5T7N3 995 aaPredicted RBP8.82□□□□□ -1
SPCS3-202ENST00000507001 BTLAQ7Z6A9 289 aa8.82□□□□□ -1
SPCS3-202ENST00000507001 LENG1Q96BZ8 264 aaPredicted RBP8.82□□□□□ -1
SPCS3-202ENST00000507001 SCO2A0A1W2PP80 73 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 C21orf2O43822 256 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 RASA1P20936 1047 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 PRSS36Q5K4E3 855 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 TRAPPC3LQ5T215 181 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
SPCS3-202ENST00000507001 ILDR2Q71H61 639 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 ALDH16A1Q8IZ83 802 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 BHMTQ93088 406 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 C2orf49Q9BVC5 232 aaPredicted RBP8.81□□□□□ -1
SPCS3-202ENST00000507001 SLC6A14Q9UN76 642 aa8.81□□□□□ -1
SPCS3-202ENST00000507001 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.8□□□□□ -1
SPCS3-202ENST00000507001 PPP1R12BO60237 982 aaPredicted RBP8.8□□□□□ -1
SPCS3-202ENST00000507001 SELPP16109 830 aa8.8□□□□□ -1
SPCS3-202ENST00000507001 TXNRD3Q86VQ6 643 aa8.8□□□□□ -1
SPCS3-202ENST00000507001 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
SPCS3-202ENST00000507001 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
SPCS3-202ENST00000507001 ZFP64Q9NPA5 681 aa8.8□□□□□ -1
SPCS3-202ENST00000507001 FAM196BA6NMK8 535 aa8.79□□□□□ -1
SPCS3-202ENST00000507001 RAC1P63000 192 aa8.79□□□□□ -1
SPCS3-202ENST00000507001 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
SPCS3-202ENST00000507001 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
SPCS3-202ENST00000507001 USTQ9Y2C2 406 aa8.78□□□□□ -1
SPCS3-202ENST00000507001 ATAD2Q6PL18 1390 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L15C9J2P7 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L10C9JJH3 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L13C9JLJ4 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L12C9JPN9 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L11C9JVI0 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L21D6R901 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L18D6R9N7 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L22D6RA61 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L17D6RBQ6 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L19D6RCP7 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L20D6RJB6 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 ATG7O95352 703 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 AFF1P51825 1210 aaKnown RBP8.77□□□□□ -1.01
SPCS3-202ENST00000507001 USP17L24Q0WX57 530 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 GSX2Q9BZM3 304 aa8.77□□□□□ -1.01
SPCS3-202ENST00000507001 TGFBR3LH3BV60 316 aa8.76□□□□□ -1.01
SPCS3-202ENST00000507001 PTK7Q13308 1070 aa8.76□□□□□ -1.01
SPCS3-202ENST00000507001 PCSK7Q16549 785 aa8.76□□□□□ -1.01
SPCS3-202ENST00000507001 RTN1Q16799 776 aa8.76□□□□□ -1.01
SPCS3-202ENST00000507001 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms