RNA–Protein interactions for RNA: ENST00000506462.5

SGMS2-207, Transcript of sphingomyelin synthase 2, humanhuman

TSL 3

Gene SGMS2, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-207ENST00000506462 DDX60Q8IY21 1712 aaKnown RBP17.36■□□□□ 0.37
SGMS2-207ENST00000506462 WDR90Q96KV7 1748 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 GLTPD2A6NH11 291 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
SGMS2-207ENST00000506462 HSPA6P17066 643 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 GNAI1P63096 354 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 PARP10Q53GL7 1025 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 CCDC93Q567U6 631 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 SOGA3Q5TF21 947 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 PPP1R42Q7Z4L9 355 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
SGMS2-207ENST00000506462 ANP32CO43423 234 aa17.35■□□□□ 0.37
SGMS2-207ENST00000506462 ALDH1B1P30837 517 aa17.35■□□□□ 0.37
SGMS2-207ENST00000506462 TCIRG1Q13488 830 aa17.35■□□□□ 0.37
SGMS2-207ENST00000506462 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
SGMS2-207ENST00000506462 C8orf58Q8NAV2 365 aa17.35■□□□□ 0.37
SGMS2-207ENST00000506462 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
SGMS2-207ENST00000506462 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
SGMS2-207ENST00000506462 POTECB2RU33 542 aa17.33■□□□□ 0.36
SGMS2-207ENST00000506462 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
SGMS2-207ENST00000506462 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
SGMS2-207ENST00000506462 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
SGMS2-207ENST00000506462 HSP90AB3PQ58FF7 597 aa17.33■□□□□ 0.36
SGMS2-207ENST00000506462 SLC10A5Q5PT55 438 aa17.33■□□□□ 0.36
SGMS2-207ENST00000506462 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
SGMS2-207ENST00000506462 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.36
SGMS2-207ENST00000506462 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
SGMS2-207ENST00000506462 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
SGMS2-207ENST00000506462 HCLS1P14317 486 aaPredicted RBP17.32■□□□□ 0.36
SGMS2-207ENST00000506462 ANKRD13DQ6ZTN6 518 aa17.32■□□□□ 0.36
SGMS2-207ENST00000506462 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
SGMS2-207ENST00000506462 TSPYL6Q8N831 410 aa17.32■□□□□ 0.36
SGMS2-207ENST00000506462 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
SGMS2-207ENST00000506462 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
SGMS2-207ENST00000506462 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
SGMS2-207ENST00000506462 NLRP3Q96P20 1036 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 HYPKQ9NX55 129 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 COL4A5P29400 1685 aa17.31■□□□□ 0.36
SGMS2-207ENST00000506462 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
SGMS2-207ENST00000506462 DDNO94850 711 aaPredicted RBP17.3■□□□□ 0.36
SGMS2-207ENST00000506462 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
SGMS2-207ENST00000506462 RTKN2Q8IZC4 609 aa17.3■□□□□ 0.36
SGMS2-207ENST00000506462 TRMT112Q9UI30 125 aaKnown RBP17.3■□□□□ 0.36
SGMS2-207ENST00000506462 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
SGMS2-207ENST00000506462 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
SGMS2-207ENST00000506462 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
SGMS2-207ENST00000506462 COL4A1P02462 1669 aa17.29■□□□□ 0.36
SGMS2-207ENST00000506462 ABCC4O15439 1325 aa17.28■□□□□ 0.36
SGMS2-207ENST00000506462 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
SGMS2-207ENST00000506462 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
SGMS2-207ENST00000506462 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
SGMS2-207ENST00000506462 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
SGMS2-207ENST00000506462 SCN4AP35499 1836 aa17.27■□□□□ 0.36
SGMS2-207ENST00000506462 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
SGMS2-207ENST00000506462 PSMD1Q99460 953 aa17.27■□□□□ 0.36
SGMS2-207ENST00000506462 FSTL1Q12841 308 aa17.26■□□□□ 0.35
SGMS2-207ENST00000506462 RTL5Q5HYW3 569 aaPredicted RBP17.26■□□□□ 0.35
SGMS2-207ENST00000506462 RIC3Q7Z5B4 369 aa17.26■□□□□ 0.35
SGMS2-207ENST00000506462 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
SGMS2-207ENST00000506462 HTRA3P83110 453 aa17.25■□□□□ 0.35
SGMS2-207ENST00000506462 CC2D2BQ6DHV5 1058 aa17.25■□□□□ 0.35
SGMS2-207ENST00000506462 LRRC37AA6NMS7 1700 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 APLP1P51693 650 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 FAM9BQ8IZU0 186 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 MYD88Q99836 296 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
SGMS2-207ENST00000506462 IL16Q14005 1332 aa17.23■□□□□ 0.35
SGMS2-207ENST00000506462 FZD9O00144 591 aa17.23■□□□□ 0.35
SGMS2-207ENST00000506462 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
SGMS2-207ENST00000506462 POTEJP0CG39 1038 aa17.23■□□□□ 0.35
SGMS2-207ENST00000506462 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
SGMS2-207ENST00000506462 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
SGMS2-207ENST00000506462 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
SGMS2-207ENST00000506462 LTBP1Q14766 1721 aa17.22■□□□□ 0.35
SGMS2-207ENST00000506462 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
SGMS2-207ENST00000506462 G2E3Q7L622 706 aa17.22■□□□□ 0.35
SGMS2-207ENST00000506462 DUOX1Q9NRD9 1551 aa17.21■□□□□ 0.35
SGMS2-207ENST00000506462 GRAPQ13588 217 aa17.21■□□□□ 0.35
SGMS2-207ENST00000506462 DDX46Q7L014 1031 aaKnown RBP17.21■□□□□ 0.35
SGMS2-207ENST00000506462 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
SGMS2-207ENST00000506462 JARID2Q92833 1246 aaPredicted RBP17.21■□□□□ 0.35
SGMS2-207ENST00000506462 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
SGMS2-207ENST00000506462 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
SGMS2-207ENST00000506462 MYH3P11055 1940 aa17.2■□□□□ 0.34
SGMS2-207ENST00000506462 IRS4O14654 1257 aaPredicted RBP17.2■□□□□ 0.34
SGMS2-207ENST00000506462 BBOX1O75936 387 aa17.2■□□□□ 0.34
SGMS2-207ENST00000506462 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
SGMS2-207ENST00000506462 AOC3Q16853 763 aa17.2■□□□□ 0.34
SGMS2-207ENST00000506462 GRIPAP1Q4V328 841 aa17.2■□□□□ 0.34
SGMS2-207ENST00000506462 SP8Q8IXZ3 490 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms