RNA–Protein interactions for RNA: ENST00000506430.2

AP3S1-204, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-204ENST00000506430 VEGFAP15692 232 aaPredicted RBP22.5■■□□□ 1.19
AP3S1-204ENST00000506430 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
AP3S1-204ENST00000506430 UTP14AQ9BVJ6 771 aaKnown RBP22.5■■□□□ 1.19
AP3S1-204ENST00000506430 ZNF277Q9NRM2 450 aaPredicted RBP22.5■■□□□ 1.19
AP3S1-204ENST00000506430 HOXA10P31260 410 aaPredicted RBP22.49■■□□□ 1.19
AP3S1-204ENST00000506430 FKBP4Q02790 459 aaKnown RBP eCLIP22.49■■□□□ 1.19
AP3S1-204ENST00000506430 RPGRQ92834 1020 aaKnown RBP22.49■■□□□ 1.19
AP3S1-204ENST00000506430 HOXB7P09629 217 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 APLP1P51693 650 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 TCIRG1Q13488 830 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 SLC51AQ86UW1 340 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 ZNF428Q96B54 188 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 RIC1Q4ADV7 1423 aa22.48■■□□□ 1.19
AP3S1-204ENST00000506430 ZNF316A6NFI3 1004 aaPredicted RBP22.47■■□□□ 1.19
AP3S1-204ENST00000506430 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
AP3S1-204ENST00000506430 FSTL1Q12841 308 aa22.47■■□□□ 1.19
AP3S1-204ENST00000506430 SLC10A5Q5PT55 438 aa22.47■■□□□ 1.19
AP3S1-204ENST00000506430 NLRP10Q86W26 655 aa22.47■■□□□ 1.19
AP3S1-204ENST00000506430 SYNE4Q8N205 404 aa22.47■■□□□ 1.19
AP3S1-204ENST00000506430 IFT57Q9NWB7 429 aa22.47■■□□□ 1.19
AP3S1-204ENST00000506430 DBF4Q9UBU7 674 aaPredicted RBP22.47■■□□□ 1.19
AP3S1-204ENST00000506430 ELL2O00472 640 aaPredicted RBP22.46■■□□□ 1.19
AP3S1-204ENST00000506430 HSP90AB3PQ58FF7 597 aa22.46■■□□□ 1.19
AP3S1-204ENST00000506430 NLRP3Q96P20 1036 aa22.46■■□□□ 1.19
AP3S1-204ENST00000506430 DICER1Q9UPY3 1922 aaKnown RBP22.46■■□□□ 1.19
AP3S1-204ENST00000506430 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
AP3S1-204ENST00000506430 GNAI1P63096 354 aa22.45■■□□□ 1.18
AP3S1-204ENST00000506430 RBM17Q96I25 401 aaKnown RBP22.45■■□□□ 1.18
AP3S1-204ENST00000506430 CRAMP1Q96RY5 1269 aa22.45■■□□□ 1.18
AP3S1-204ENST00000506430 HTRA3P83110 453 aa22.44■■□□□ 1.18
AP3S1-204ENST00000506430 CALD1Q05682 793 aaKnown RBP22.44■■□□□ 1.18
AP3S1-204ENST00000506430 ANKRD13DQ6ZTN6 518 aa22.44■■□□□ 1.18
AP3S1-204ENST00000506430 SMC1BQ8NDV3 1235 aa22.44■■□□□ 1.18
AP3S1-204ENST00000506430 PLBD2Q8NHP8 589 aa22.44■■□□□ 1.18
AP3S1-204ENST00000506430 SNED1Q8TER0 1413 aa22.43■■□□□ 1.18
AP3S1-204ENST00000506430 HCLS1P14317 486 aaPredicted RBP22.43■■□□□ 1.18
AP3S1-204ENST00000506430 TRMT112Q9UI30 125 aaKnown RBP22.43■■□□□ 1.18
AP3S1-204ENST00000506430 IARSP41252 1262 aaKnown RBP22.42■■□□□ 1.18
AP3S1-204ENST00000506430 DNAJC5GQ8N7S2 189 aa22.42■■□□□ 1.18
AP3S1-204ENST00000506430 C8orf58Q8NAV2 365 aa22.42■■□□□ 1.18
AP3S1-204ENST00000506430 HYPKQ9NX55 129 aa22.42■■□□□ 1.18
AP3S1-204ENST00000506430 WDR90Q96KV7 1748 aa22.42■■□□□ 1.18
AP3S1-204ENST00000506430 PPEF1O14829 653 aaPredicted RBP22.41■■□□□ 1.18
AP3S1-204ENST00000506430 CC2D2BQ6DHV5 1058 aa22.41■■□□□ 1.18
AP3S1-204ENST00000506430 PSMD1Q99460 953 aa22.41■■□□□ 1.18
AP3S1-204ENST00000506430 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
AP3S1-204ENST00000506430 ZNF541Q9H0D2 1346 aa22.4■■□□□ 1.18
AP3S1-204ENST00000506430 ATP5J2-PTCD1G3V325 749 aa22.4■■□□□ 1.18
AP3S1-204ENST00000506430 ISCA1Q9BUE6 129 aa22.4■■□□□ 1.18
AP3S1-204ENST00000506430 ABCC4O15439 1325 aa22.39■■□□□ 1.18
AP3S1-204ENST00000506430 SH3TC1Q8TE82 1336 aa22.39■■□□□ 1.18
AP3S1-204ENST00000506430 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
AP3S1-204ENST00000506430 MRS2Q9HD23 443 aa22.39■■□□□ 1.17
AP3S1-204ENST00000506430 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
AP3S1-204ENST00000506430 ANP32CO43423 234 aa22.38■■□□□ 1.17
AP3S1-204ENST00000506430 POTEIP0CG38 1075 aa22.38■■□□□ 1.17
AP3S1-204ENST00000506430 POTEJP0CG39 1038 aa22.38■■□□□ 1.17
AP3S1-204ENST00000506430 TSPYL6Q8N831 410 aa22.38■■□□□ 1.17
AP3S1-204ENST00000506430 FZD9O00144 591 aa22.37■■□□□ 1.17
AP3S1-204ENST00000506430 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
AP3S1-204ENST00000506430 FAM89AQ96GI7 184 aa22.37■■□□□ 1.17
AP3S1-204ENST00000506430 WWC1Q8IX03 1113 aa22.36■■□□□ 1.17
AP3S1-204ENST00000506430 L3MBTL3Q96JM7 780 aaPredicted RBP22.36■■□□□ 1.17
AP3S1-204ENST00000506430 ATP6V0A2Q9Y487 856 aa22.36■■□□□ 1.17
AP3S1-204ENST00000506430 CCDC27Q2M243 656 aa22.35■■□□□ 1.17
AP3S1-204ENST00000506430 GRIPAP1Q4V328 841 aa22.35■■□□□ 1.17
AP3S1-204ENST00000506430 RTL5Q5HYW3 569 aaPredicted RBP22.35■■□□□ 1.17
AP3S1-204ENST00000506430 RIC3Q7Z5B4 369 aa22.35■■□□□ 1.17
AP3S1-204ENST00000506430 JDP2Q8WYK2 163 aa22.35■■□□□ 1.17
AP3S1-204ENST00000506430 COL4A5P29400 1685 aa22.34■■□□□ 1.17
AP3S1-204ENST00000506430 IQCA1LA6NCM1 817 aa22.33■■□□□ 1.17
AP3S1-204ENST00000506430 BBOX1O75936 387 aa22.33■■□□□ 1.17
AP3S1-204ENST00000506430 DDX46Q7L014 1031 aaKnown RBP22.33■■□□□ 1.17
AP3S1-204ENST00000506430 LARGE2Q8N3Y3 721 aa22.33■■□□□ 1.17
AP3S1-204ENST00000506430 TMX4Q9H1E5 349 aaPredicted RBP22.33■■□□□ 1.17
AP3S1-204ENST00000506430 TAF1DQ9H5J8 278 aaPredicted RBP22.33■■□□□ 1.17
AP3S1-204ENST00000506430 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
AP3S1-204ENST00000506430 TRIM28Q13263 835 aaKnown RBP22.32■■□□□ 1.16
AP3S1-204ENST00000506430 CCDC30Q5VVM6 783 aa22.32■■□□□ 1.16
AP3S1-204ENST00000506430 CHADLQ6NUI6 762 aa22.32■■□□□ 1.16
AP3S1-204ENST00000506430 SP8Q8IXZ3 490 aa22.32■■□□□ 1.16
AP3S1-204ENST00000506430 LAMB2P55268 1798 aa22.31■■□□□ 1.16
AP3S1-204ENST00000506430 GRAPQ13588 217 aa22.31■■□□□ 1.16
AP3S1-204ENST00000506430 GPC2Q8N158 579 aa22.31■■□□□ 1.16
AP3S1-204ENST00000506430 GRAPLQ8TC17 118 aaPredicted RBP22.31■■□□□ 1.16
AP3S1-204ENST00000506430 MYD88Q99836 296 aa22.31■■□□□ 1.16
AP3S1-204ENST00000506430 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
AP3S1-204ENST00000506430 KLRG1Q96E93 195 aa22.3■■□□□ 1.16
AP3S1-204ENST00000506430 HACL1Q9UJ83 578 aa22.3■■□□□ 1.16
AP3S1-204ENST00000506430 GJA3Q9Y6H8 435 aa22.3■■□□□ 1.16
AP3S1-204ENST00000506430 IRS4O14654 1257 aaPredicted RBP22.29■■□□□ 1.16
AP3S1-204ENST00000506430 PPIP5K2O43314 1243 aa22.29■■□□□ 1.16
AP3S1-204ENST00000506430 EIF6P56537 245 aaKnown RBP22.29■■□□□ 1.16
AP3S1-204ENST00000506430 SF3B3Q15393 1217 aaKnown RBP22.29■■□□□ 1.16
AP3S1-204ENST00000506430 AOC3Q16853 763 aa22.29■■□□□ 1.16
AP3S1-204ENST00000506430 PCNTO95613 3336 aa22.28■■□□□ 1.16
AP3S1-204ENST00000506430 EPHX2P34913 555 aa22.28■■□□□ 1.16
AP3S1-204ENST00000506430 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
AP3S1-204ENST00000506430 DPP8Q6V1X1 898 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms