RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
SNHG4-203ENST00000506188 SH3TC1Q8TE82 1336 aa18.05■□□□□ 0.48
SNHG4-203ENST00000506188 NTSR2O95665 410 aa18.05■□□□□ 0.48
SNHG4-203ENST00000506188 CRY2Q49AN0 593 aa18.05■□□□□ 0.48
SNHG4-203ENST00000506188 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
SNHG4-203ENST00000506188 KIAA1551Q9HCM1 1747 aa18.05■□□□□ 0.48
SNHG4-203ENST00000506188 GOLGB1Q14789 3259 aaKnown RBP18.05■□□□□ 0.48
SNHG4-203ENST00000506188 LTBP3Q9NS15 1303 aa18.04■□□□□ 0.48
SNHG4-203ENST00000506188 NFKBIEO00221 500 aa18.04■□□□□ 0.48
SNHG4-203ENST00000506188 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
SNHG4-203ENST00000506188 SLC10A5Q5PT55 438 aa18.04■□□□□ 0.48
SNHG4-203ENST00000506188 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
SNHG4-203ENST00000506188 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
SNHG4-203ENST00000506188 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
SNHG4-203ENST00000506188 CRAMP1Q96RY5 1269 aa18.03■□□□□ 0.48
SNHG4-203ENST00000506188 MYH16Q9H6N6 1097 aa18.03■□□□□ 0.48
SNHG4-203ENST00000506188 AFDNP55196 1824 aaKnown RBP18.02■□□□□ 0.48
SNHG4-203ENST00000506188 BCORQ6W2J9 1755 aa18.02■□□□□ 0.48
SNHG4-203ENST00000506188 TOMM70O94826 608 aa18.02■□□□□ 0.48
SNHG4-203ENST00000506188 TWISTNBQ3B726 338 aaPredicted RBP18.02■□□□□ 0.48
SNHG4-203ENST00000506188 TSR2Q969E8 191 aaKnown RBP18.02■□□□□ 0.48
SNHG4-203ENST00000506188 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
SNHG4-203ENST00000506188 GLTPD2A6NH11 291 aa18.01■□□□□ 0.47
SNHG4-203ENST00000506188 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
SNHG4-203ENST00000506188 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
SNHG4-203ENST00000506188 C7orf43Q8WVR3 580 aa18.01■□□□□ 0.47
SNHG4-203ENST00000506188 BBOX1O75936 387 aa18■□□□□ 0.47
SNHG4-203ENST00000506188 VEGFAP15692 232 aaPredicted RBP18■□□□□ 0.47
SNHG4-203ENST00000506188 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
SNHG4-203ENST00000506188 TRIM28Q13263 835 aaKnown RBP18■□□□□ 0.47
SNHG4-203ENST00000506188 ABCC12Q96J65 1359 aa18■□□□□ 0.47
SNHG4-203ENST00000506188 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
SNHG4-203ENST00000506188 KIF3CO14782 793 aa17.99■□□□□ 0.47
SNHG4-203ENST00000506188 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
SNHG4-203ENST00000506188 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
SNHG4-203ENST00000506188 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
SNHG4-203ENST00000506188 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
SNHG4-203ENST00000506188 ARFGEF1Q9Y6D6 1849 aa17.99■□□□□ 0.47
SNHG4-203ENST00000506188 HCLS1P14317 486 aaPredicted RBP17.98■□□□□ 0.47
SNHG4-203ENST00000506188 ISCA1Q9BUE6 129 aa17.98■□□□□ 0.47
SNHG4-203ENST00000506188 PHAXQ9H814 394 aaKnown RBP17.98■□□□□ 0.47
SNHG4-203ENST00000506188 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
SNHG4-203ENST00000506188 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
SNHG4-203ENST00000506188 SYNE4Q8N205 404 aa17.97■□□□□ 0.47
SNHG4-203ENST00000506188 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
SNHG4-203ENST00000506188 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
SNHG4-203ENST00000506188 PSMD1Q99460 953 aa17.97■□□□□ 0.47
SNHG4-203ENST00000506188 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
SNHG4-203ENST00000506188 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
SNHG4-203ENST00000506188 KSR2Q6VAB6 950 aa17.96■□□□□ 0.47
SNHG4-203ENST00000506188 TSPYL6Q8N831 410 aa17.96■□□□□ 0.47
SNHG4-203ENST00000506188 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
SNHG4-203ENST00000506188 FAM89AQ96GI7 184 aa17.96■□□□□ 0.47
SNHG4-203ENST00000506188 MYD88Q99836 296 aa17.96■□□□□ 0.47
SNHG4-203ENST00000506188 IARSP41252 1262 aaKnown RBP17.95■□□□□ 0.46
SNHG4-203ENST00000506188 ZBTB38Q8NAP3 1195 aaPredicted RBP17.95■□□□□ 0.46
SNHG4-203ENST00000506188 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
SNHG4-203ENST00000506188 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
SNHG4-203ENST00000506188 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
SNHG4-203ENST00000506188 ATP6V0A2Q9Y487 856 aa17.95■□□□□ 0.46
SNHG4-203ENST00000506188 FANCIQ9NVI1 1328 aa17.95■□□□□ 0.46
SNHG4-203ENST00000506188 IRS4O14654 1257 aaPredicted RBP17.94■□□□□ 0.46
SNHG4-203ENST00000506188 FSTL1Q12841 308 aa17.94■□□□□ 0.46
SNHG4-203ENST00000506188 MAP3K2Q9Y2U5 619 aa17.94■□□□□ 0.46
SNHG4-203ENST00000506188 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
SNHG4-203ENST00000506188 HSPA6P17066 643 aa17.93■□□□□ 0.46
SNHG4-203ENST00000506188 GRAPQ13588 217 aa17.93■□□□□ 0.46
SNHG4-203ENST00000506188 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
SNHG4-203ENST00000506188 SP8Q8IXZ3 490 aa17.93■□□□□ 0.46
SNHG4-203ENST00000506188 GRAPLQ8TC17 118 aaPredicted RBP17.93■□□□□ 0.46
SNHG4-203ENST00000506188 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
SNHG4-203ENST00000506188 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
SNHG4-203ENST00000506188 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 PI4KAP2A4QPH2 592 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 PRELPP51888 382 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 EIF6P56537 245 aaKnown RBP17.92■□□□□ 0.46
SNHG4-203ENST00000506188 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
SNHG4-203ENST00000506188 SF3B3Q15393 1217 aaKnown RBP17.92■□□□□ 0.46
SNHG4-203ENST00000506188 DPP8Q6V1X1 898 aaPredicted RBP17.92■□□□□ 0.46
SNHG4-203ENST00000506188 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 LARGE2Q8N3Y3 721 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 PI4KAP1Q8N8J0 262 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 SMC1BQ8NDV3 1235 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 ABCC4O15439 1325 aa17.92■□□□□ 0.46
SNHG4-203ENST00000506188 CCER2I3L3R5 266 aa17.91■□□□□ 0.46
SNHG4-203ENST00000506188 PCCAP05165 728 aaPredicted RBP17.91■□□□□ 0.46
SNHG4-203ENST00000506188 FKBP5Q13451 457 aaPredicted RBP17.91■□□□□ 0.46
SNHG4-203ENST00000506188 CCDC152Q4G0S7 254 aa17.91■□□□□ 0.46
SNHG4-203ENST00000506188 OLFM4Q6UX06 510 aa17.91■□□□□ 0.46
SNHG4-203ENST00000506188 MPNDQ8N594 471 aa17.91■□□□□ 0.46
SNHG4-203ENST00000506188 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
SNHG4-203ENST00000506188 ZNF428Q96B54 188 aa17.9■□□□□ 0.46
SNHG4-203ENST00000506188 NUP98P52948 1817 aa17.9■□□□□ 0.46
SNHG4-203ENST00000506188 PDE8AO60658 829 aa17.89■□□□□ 0.45
SNHG4-203ENST00000506188 VAMP4O75379 141 aa17.89■□□□□ 0.45
SNHG4-203ENST00000506188 DDNO94850 711 aaPredicted RBP17.89■□□□□ 0.45
SNHG4-203ENST00000506188 APLP1P51693 650 aa17.89■□□□□ 0.45
SNHG4-203ENST00000506188 FLIIQ13045 1269 aa17.89■□□□□ 0.45
SNHG4-203ENST00000506188 PPIP5K2O43314 1243 aa17.88■□□□□ 0.45
SNHG4-203ENST00000506188 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms