RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 NUTM1Q86Y26 1132 aa22.42■■□□□ 1.18
DDR1-257ENST00000505534 NGEFQ8N5V2 710 aa22.42■■□□□ 1.18
DDR1-257ENST00000505534 ABCC12Q96J65 1359 aa22.41■■□□□ 1.18
DDR1-257ENST00000505534 MAP3K15Q6ZN16 1313 aa22.41■■□□□ 1.18
DDR1-257ENST00000505534 WDR33Q9C0J8 1336 aaKnown RBP22.41■■□□□ 1.18
DDR1-257ENST00000505534 MAP2K1Q02750 393 aaPredicted RBP22.41■■□□□ 1.18
DDR1-257ENST00000505534 PNISRQ8TF01 805 aaKnown RBP22.41■■□□□ 1.18
DDR1-257ENST00000505534 RPGRQ92834 1020 aaKnown RBP22.41■■□□□ 1.18
DDR1-257ENST00000505534 TRPM7Q96QT4 1865 aa22.41■■□□□ 1.18
DDR1-257ENST00000505534 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
DDR1-257ENST00000505534 LMOD1P29536 600 aaPredicted RBP22.4■■□□□ 1.18
DDR1-257ENST00000505534 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
DDR1-257ENST00000505534 ABT1Q9ULW3 272 aaKnown RBP22.4■■□□□ 1.18
DDR1-257ENST00000505534 GJA3Q9Y6H8 435 aa22.4■■□□□ 1.18
DDR1-257ENST00000505534 RIC1Q4ADV7 1423 aa22.4■■□□□ 1.18
DDR1-257ENST00000505534 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
DDR1-257ENST00000505534 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
DDR1-257ENST00000505534 LTBP1Q14766 1721 aa22.38■■□□□ 1.17
DDR1-257ENST00000505534 NEFMP07197 916 aa22.38■■□□□ 1.17
DDR1-257ENST00000505534 HSPA8P11142 646 aaKnown RBP22.38■■□□□ 1.17
DDR1-257ENST00000505534 LARGE2Q8N3Y3 721 aa22.38■■□□□ 1.17
DDR1-257ENST00000505534 CRAMP1Q96RY5 1269 aa22.38■■□□□ 1.17
DDR1-257ENST00000505534 RRP7AQ9Y3A4 280 aaKnown RBP22.38■■□□□ 1.17
DDR1-257ENST00000505534 COL4A5P29400 1685 aa22.38■■□□□ 1.17
DDR1-257ENST00000505534 TTLL7Q6ZT98 887 aa22.37■■□□□ 1.17
DDR1-257ENST00000505534 RBM17Q96I25 401 aaKnown RBP22.37■■□□□ 1.17
DDR1-257ENST00000505534 GPTP24298 496 aa22.36■■□□□ 1.17
DDR1-257ENST00000505534 SCNN1DP51172 638 aa22.36■■□□□ 1.17
DDR1-257ENST00000505534 EIF4A1P60842 406 aaKnown RBP22.36■■□□□ 1.17
DDR1-257ENST00000505534 SUSD4Q5VX71 490 aa22.36■■□□□ 1.17
DDR1-257ENST00000505534 UBN2Q6ZU65 1347 aa22.35■■□□□ 1.17
DDR1-257ENST00000505534 MYL6BP14649 208 aa22.35■■□□□ 1.17
DDR1-257ENST00000505534 EPS15P42566 896 aa22.35■■□□□ 1.17
DDR1-257ENST00000505534 USP50Q70EL3 339 aaPredicted RBP22.35■■□□□ 1.17
DDR1-257ENST00000505534 PPEF1O14829 653 aaPredicted RBP22.34■■□□□ 1.17
DDR1-257ENST00000505534 ECE1P42892 770 aa22.34■■□□□ 1.17
DDR1-257ENST00000505534 ZNF34Q8IZ26 560 aa22.34■■□□□ 1.17
DDR1-257ENST00000505534 ZBTB3Q9H5J0 574 aa22.34■■□□□ 1.17
DDR1-257ENST00000505534 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.17
DDR1-257ENST00000505534 PPP1R42Q7Z4L9 355 aa22.33■■□□□ 1.17
DDR1-257ENST00000505534 NIM1KQ8IY84 436 aa22.33■■□□□ 1.17
DDR1-257ENST00000505534 VPS33BQ9H267 617 aa22.33■■□□□ 1.17
DDR1-257ENST00000505534 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
DDR1-257ENST00000505534 NTSR2O95665 410 aa22.32■■□□□ 1.16
DDR1-257ENST00000505534 ABHD8Q96I13 439 aa22.32■■□□□ 1.16
DDR1-257ENST00000505534 CAPNS2Q96L46 248 aa22.32■■□□□ 1.16
DDR1-257ENST00000505534 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
DDR1-257ENST00000505534 ERBB4Q15303 1308 aa22.31■■□□□ 1.16
DDR1-257ENST00000505534 THSD7BQ9C0I4 1608 aa22.31■■□□□ 1.16
DDR1-257ENST00000505534 FMR1Q06787 632 aaKnown RBP eCLIP22.31■■□□□ 1.16
DDR1-257ENST00000505534 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
DDR1-257ENST00000505534 NLRP3Q96P20 1036 aa22.31■■□□□ 1.16
DDR1-257ENST00000505534 BEGAINQ9BUH8 593 aa22.31■■□□□ 1.16
DDR1-257ENST00000505534 PPIP5K2O43314 1243 aa22.3■■□□□ 1.16
DDR1-257ENST00000505534 CST9Q5W186 159 aa22.3■■□□□ 1.16
DDR1-257ENST00000505534 PAXIP1Q6ZW49 1069 aaPredicted RBP22.3■■□□□ 1.16
DDR1-257ENST00000505534 GPR101Q96P66 508 aaPredicted RBP22.3■■□□□ 1.16
DDR1-257ENST00000505534 PLEKHF1Q96S99 279 aa22.3■■□□□ 1.16
DDR1-257ENST00000505534 NFE2L2Q16236 605 aa22.29■■□□□ 1.16
DDR1-257ENST00000505534 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
DDR1-257ENST00000505534 ADARB2Q9NS39 739 aaKnown RBP22.29■■□□□ 1.16
DDR1-257ENST00000505534 ATP6V0A2Q9Y487 856 aa22.29■■□□□ 1.16
DDR1-257ENST00000505534 TRAF5O00463 557 aa22.28■■□□□ 1.16
DDR1-257ENST00000505534 SLC10A5Q5PT55 438 aa22.28■■□□□ 1.16
DDR1-257ENST00000505534 CYP4F22Q6NT55 531 aa22.28■■□□□ 1.16
DDR1-257ENST00000505534 SLC51AQ86UW1 340 aa22.28■■□□□ 1.16
DDR1-257ENST00000505534 GPRC5DQ9NZD1 345 aa22.28■■□□□ 1.16
DDR1-257ENST00000505534 TLL2Q9Y6L7 1015 aa22.28■■□□□ 1.16
DDR1-257ENST00000505534 AOC3Q16853 763 aa22.27■■□□□ 1.16
DDR1-257ENST00000505534 SUPT20HQ8NEM7 779 aa22.27■■□□□ 1.16
DDR1-257ENST00000505534 THUMPD2Q9BTF0 503 aaKnown RBP22.27■■□□□ 1.16
DDR1-257ENST00000505534 PNNQ9H307 717 aaKnown RBP22.27■■□□□ 1.16
DDR1-257ENST00000505534 ZNRF3Q9ULT6 936 aa22.27■■□□□ 1.16
DDR1-257ENST00000505534 MAP2K2P36507 400 aa22.26■■□□□ 1.15
DDR1-257ENST00000505534 UTP14AQ9BVJ6 771 aaKnown RBP22.26■■□□□ 1.15
DDR1-257ENST00000505534 RTFDC1Q9BY42 306 aaPredicted RBP22.26■■□□□ 1.15
DDR1-257ENST00000505534 ANKRD36CQ5JPF3 1778 aa22.25■■□□□ 1.15
DDR1-257ENST00000505534 CXCL9Q07325 125 aa22.25■■□□□ 1.15
DDR1-257ENST00000505534 GRM1Q13255 1194 aa22.25■■□□□ 1.15
DDR1-257ENST00000505534 BBOX1O75936 387 aa22.24■■□□□ 1.15
DDR1-257ENST00000505534 LRP10Q7Z4F1 713 aa22.24■■□□□ 1.15
DDR1-257ENST00000505534 LAMB2P55268 1798 aa22.24■■□□□ 1.15
DDR1-257ENST00000505534 ABCC4O15439 1325 aa22.24■■□□□ 1.15
DDR1-257ENST00000505534 PDIA6Q15084 440 aa22.23■■□□□ 1.15
DDR1-257ENST00000505534 SP8Q8IXZ3 490 aa22.23■■□□□ 1.15
DDR1-257ENST00000505534 TSPYL4Q9UJ04 414 aa22.23■■□□□ 1.15
DDR1-257ENST00000505534 SAPCD2Q86UD0 394 aa22.22■■□□□ 1.15
DDR1-257ENST00000505534 HHIPL1Q96JK4 782 aa22.22■■□□□ 1.15
DDR1-257ENST00000505534 PGAP2Q9UHJ9 254 aa22.22■■□□□ 1.15
DDR1-257ENST00000505534 CDHR2Q9BYE9 1310 aa22.22■■□□□ 1.15
DDR1-257ENST00000505534 MAPK8IP3Q9UPT6 1336 aa22.22■■□□□ 1.15
DDR1-257ENST00000505534 CELF2O95319 508 aaKnown RBP22.21■■□□□ 1.15
DDR1-257ENST00000505534 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
DDR1-257ENST00000505534 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
DDR1-257ENST00000505534 GMPSP49915 693 aaPredicted RBP22.21■■□□□ 1.15
DDR1-257ENST00000505534 CIAPIN1Q6FI81 312 aa22.21■■□□□ 1.15
DDR1-257ENST00000505534 DPP8Q6V1X1 898 aaPredicted RBP22.21■■□□□ 1.15
DDR1-257ENST00000505534 MPNDQ8N594 471 aa22.21■■□□□ 1.15
DDR1-257ENST00000505534 CASP8AP2Q9UKL3 1982 aa22.21■■□□□ 1.15
DDR1-257ENST00000505534 CA12O43570 354 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms