RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 C11orf91Q3C1V1 193 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 AXDND1Q5T1B0 1012 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 SH3RF1Q7Z6J0 888 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 RELL1Q8IUW5 271 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 EPS8L3Q8TE67 593 aaKnown RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 TRIM52Q96A61 297 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 NUDT16Q96DE0 195 aaKnown RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 IFT43Q96FT9 208 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 DNAJC7Q99615 494 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 DNAJC25Q9H1X3 360 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 HOMER2Q9NSB8 354 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 TTF2Q9UNY4 1162 aaKnown RBP4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 HPS5Q9UPZ3 1129 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 AXIN2Q9Y2T1 843 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 HCN4Q9Y3Q4 1203 aa4.85□□□□□ -1.63
HMGB1P22-201ENST00000505315 ESYT3A0FGR9 886 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 A6NJY4 79 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ERVH48-1M5A8F1 160 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 GBP2P32456 591 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 IRS1P35568 1242 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 MMP16P51512 607 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 TBX4P57082 545 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 COPS2P61201 443 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 RAB33AQ14088 237 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ARID5BQ14865 1188 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 RALBP1Q15311 655 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ESCO1Q5FWF5 840 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 FAM26DQ5JW98 314 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 DMRTA1Q5VZB9 504 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ETFBKMTQ8IXQ9 262 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZNF511Q8NB15 262 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 STAG1Q8WVM7 1258 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 CCDC74AQ96AQ1 378 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 SGSM3Q96HU1 749 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 STAC3Q96MF2 364 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 OSBPL7Q9BZF2 842 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 TMX1Q9H3N1 280 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ETNK1Q9HBU6 452 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 ST7Q9NRC1 585 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 KLK14Q9P0G3 267 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 VPS9D1Q9Y2B5 631 aa4.84□□□□□ -1.63
HMGB1P22-201ENST00000505315 SERTM1A2A2V5 107 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 SH3BP5O60239 455 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 CENPBP07199 599 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 RHBDL3P58872 404 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 HSP90AB4PQ58FF6 505 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 C4orf48Q5BLP8 95 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 ARSHQ5FYA8 562 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 VASH1Q7L8A9 365 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 ERMP1Q7Z2K6 904 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 RASGRP4Q8TDF6 673 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 RPS6KC1Q96S38 1066 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 IER2Q9BTL4 223 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 SLC4A5Q9BY07 1137 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 GINM1Q9NU53 330 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 FAM13BQ9NYF5 915 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 SCHIP1Q9P0W5 487 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 STRIP2Q9ULQ0 834 aa4.83□□□□□ -1.64
HMGB1P22-201ENST00000505315 PLIN1O60240 522 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 TRIM37O94972 964 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 RPLP1P05386 114 aaKnown RBP4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 ST13P50502 369 aaKnown RBP4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 SMTNP53814 917 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 EPHA4P54764 986 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 EVA1CP58658 441 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 PWP1Q13610 501 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 MAP3K11Q16584 847 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 INTS6LQ5JSJ4 861 aaKnown RBP4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 USPL1Q5W0Q7 1092 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 FBXW10Q5XX13 1052 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 PPP4R4Q6NUP7 873 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 NXPE4Q6UWF7 544 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 CYP2U1Q7Z449 544 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 TREML1Q86YW5 311 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 ALDH16A1Q8IZ83 802 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 STAG2Q8N3U4 1231 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 ANKK1Q8NFD2 765 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 TRPM4Q8TD43 1214 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 MYO19Q96H55 970 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 GGNBP2Q9H3C7 697 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 OSBPL3Q9H4L5 887 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 KANSL2Q9H9L4 492 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 RAB6BQ9NRW1 208 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 TYW1Q9NV66 732 aaKnown RBP4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 PPP4R2Q9NY27 417 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 CABP1Q9NZU7 370 aa4.82□□□□□ -1.64
HMGB1P22-201ENST00000505315 WASLO00401 505 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 KLF4O43474 513 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 POLR3DP05423 398 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 HOXB1P14653 301 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 NOS2P35228 1153 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 EIF4A3P38919 411 aaKnown RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 MASP1P48740 699 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 ERVK-9P63128 1117 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 FOXK2Q01167 660 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 SAFB2Q14151 953 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 FAM50AQ14320 339 aaKnown RBP4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 RASA3Q14644 834 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 TLR1Q15399 786 aa4.81□□□□□ -1.64
HMGB1P22-201ENST00000505315 CCDC85BQ15834 202 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms