RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 SFSWAPQ12872 951 aaKnown RBP7.16□□□□□ -1.26
LINC01088-202ENST00000505149 KLK14Q9P0G3 267 aa7.16□□□□□ -1.26
LINC01088-202ENST00000505149 SIN3BO75182 1162 aa7.15□□□□□ -1.26
LINC01088-202ENST00000505149 EPXP11678 715 aa7.15□□□□□ -1.26
LINC01088-202ENST00000505149 EPB42P16452 691 aa7.15□□□□□ -1.26
LINC01088-202ENST00000505149 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.26
LINC01088-202ENST00000505149 KLF15Q9UIH9 416 aa7.15□□□□□ -1.26
LINC01088-202ENST00000505149 GGA1Q9UJY5 639 aa7.15□□□□□ -1.26
LINC01088-202ENST00000505149 MICAL2O94851 1124 aa7.14□□□□□ -1.27
LINC01088-202ENST00000505149 SPEM2Q0P670 501 aa7.14□□□□□ -1.27
LINC01088-202ENST00000505149 EDARADDQ8WWZ3 215 aa7.14□□□□□ -1.27
LINC01088-202ENST00000505149 TNFRSF25Q93038 417 aa7.14□□□□□ -1.27
LINC01088-202ENST00000505149 IFT43Q96FT9 208 aa7.14□□□□□ -1.27
LINC01088-202ENST00000505149 ADARB2-AS1A8MUL3 147 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 TNFRSF10BO14763 440 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 BRD2P25440 801 aaKnown RBP7.13□□□□□ -1.27
LINC01088-202ENST00000505149 GRNP28799 593 aaKnown RBP7.13□□□□□ -1.27
LINC01088-202ENST00000505149 IDH3AP50213 366 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 ARSDP51689 593 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 PDE4CQ08493 712 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 NEUROD1Q13562 356 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 FCHSD1Q86WN1 690 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 KRTAP1-3Q8IUG1 177 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 GALNT6Q8NCL4 622 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 SLC30A3Q99726 388 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 PRR12Q9ULL5 1215 aa7.13□□□□□ -1.27
LINC01088-202ENST00000505149 NEURL1BA8MQ27 555 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 SHISA8B8ZZ34 492 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 RNF225M0QZC1 329 aaPredicted RBP7.12□□□□□ -1.27
LINC01088-202ENST00000505149 EGFRP00533 1210 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 PHLDB3Q6NSJ2 640 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 CAPN12Q6ZSI9 719 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 SYT9Q86SS6 491 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 GSX2Q9BZM3 304 aa7.12□□□□□ -1.27
LINC01088-202ENST00000505149 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
LINC01088-202ENST00000505149 OPLAHO14841 1288 aa7.11□□□□□ -1.27
LINC01088-202ENST00000505149 KCNMA1Q12791 1236 aa7.11□□□□□ -1.27
LINC01088-202ENST00000505149 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
LINC01088-202ENST00000505149 B4GALNT3Q6L9W6 998 aa7.11□□□□□ -1.27
LINC01088-202ENST00000505149 TREML1Q86YW5 311 aa7.11□□□□□ -1.27
LINC01088-202ENST00000505149 SCARF2Q96GP6 870 aaPredicted RBP7.11□□□□□ -1.27
LINC01088-202ENST00000505149 MKNK1Q9BUB5 465 aa7.11□□□□□ -1.27
LINC01088-202ENST00000505149 ELOA3CA0A087WX78 387 aaPredicted RBP7.1□□□□□ -1.27
LINC01088-202ENST00000505149 ELOA3DA6NLF2 546 aaPredicted RBP7.1□□□□□ -1.27
LINC01088-202ENST00000505149 MAP3K6O95382 1288 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 HOXB4P17483 251 aaPredicted RBP7.1□□□□□ -1.27
LINC01088-202ENST00000505149 PCBP4P57723 403 aaKnown RBP7.1□□□□□ -1.27
LINC01088-202ENST00000505149 CCINQ13939 588 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 ELOA3BQ3SY89 546 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 ABTB2Q8N961 1025 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 ELOA3Q8NG57 546 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 HELQQ8TDG4 1101 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 STIM2Q9P246 746 aa7.1□□□□□ -1.27
LINC01088-202ENST00000505149 NPR3P17342 541 aa7.09□□□□□ -1.27
LINC01088-202ENST00000505149 NEDD1Q8NHV4 660 aa7.09□□□□□ -1.27
LINC01088-202ENST00000505149 BTBD6Q96KE9 485 aa7.09□□□□□ -1.27
LINC01088-202ENST00000505149 ARID3AQ99856 593 aa7.09□□□□□ -1.27
LINC01088-202ENST00000505149 FAM13BQ9NYF5 915 aa7.09□□□□□ -1.27
LINC01088-202ENST00000505149 MTMR7Q9Y216 660 aa7.09□□□□□ -1.27
LINC01088-202ENST00000505149 DGKGP49619 791 aa7.08□□□□□ -1.28
LINC01088-202ENST00000505149 GSK3AP49840 483 aa7.08□□□□□ -1.28
LINC01088-202ENST00000505149 MARSP56192 900 aaKnown RBP7.08□□□□□ -1.28
LINC01088-202ENST00000505149 NAA30Q147X3 362 aaPredicted RBP7.08□□□□□ -1.28
LINC01088-202ENST00000505149 FAM26DQ5JW98 314 aa7.08□□□□□ -1.28
LINC01088-202ENST00000505149 KANK3Q6NY19 840 aa7.08□□□□□ -1.28
LINC01088-202ENST00000505149 BEND7Q8N7W2 519 aaPredicted RBP7.08□□□□□ -1.28
LINC01088-202ENST00000505149 SEPT3Q9UH03 358 aa7.08□□□□□ -1.28
LINC01088-202ENST00000505149 RTCBQ9Y3I0 505 aaKnown RBP7.08□□□□□ -1.28
LINC01088-202ENST00000505149 PHF20L1A8MW92 1017 aa7.07□□□□□ -1.28
LINC01088-202ENST00000505149 CHSY3Q70JA7 882 aa7.07□□□□□ -1.28
LINC01088-202ENST00000505149 RETREG2Q8NC44 543 aa7.07□□□□□ -1.28
LINC01088-202ENST00000505149 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
LINC01088-202ENST00000505149 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.07□□□□□ -1.28
LINC01088-202ENST00000505149 KCNMB2Q9Y691 235 aa7.07□□□□□ -1.28
LINC01088-202ENST00000505149 PIK3R2O00459 728 aa7.06□□□□□ -1.28
LINC01088-202ENST00000505149 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
LINC01088-202ENST00000505149 ALAS2P22557 587 aa7.06□□□□□ -1.28
LINC01088-202ENST00000505149 XP32Q5T750 250 aa7.06□□□□□ -1.28
LINC01088-202ENST00000505149 LINC00114Q6XXX2 140 aa7.06□□□□□ -1.28
LINC01088-202ENST00000505149 PODNQ7Z5L7 613 aa7.06□□□□□ -1.28
LINC01088-202ENST00000505149 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
LINC01088-202ENST00000505149 ZAP70P43403 619 aa7.05□□□□□ -1.28
LINC01088-202ENST00000505149 SF3B2Q13435 895 aaKnown RBP7.05□□□□□ -1.28
LINC01088-202ENST00000505149 PCSK7Q16549 785 aa7.05□□□□□ -1.28
LINC01088-202ENST00000505149 ALYREFQ86V81 257 aaKnown RBP7.05□□□□□ -1.28
LINC01088-202ENST00000505149 GTF3C2Q8WUA4 911 aaPredicted RBP7.05□□□□□ -1.28
LINC01088-202ENST00000505149 BHMTQ93088 406 aa7.05□□□□□ -1.28
LINC01088-202ENST00000505149 PNMA5Q96PV4 448 aa7.05□□□□□ -1.28
LINC01088-202ENST00000505149 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
LINC01088-202ENST00000505149 CARNS1A5YM72 827 aa7.04□□□□□ -1.28
LINC01088-202ENST00000505149 NFKB1P19838 968 aa7.04□□□□□ -1.28
LINC01088-202ENST00000505149 ADH7P40394 386 aa7.04□□□□□ -1.28
LINC01088-202ENST00000505149 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
LINC01088-202ENST00000505149 RAB44Q7Z6P3 723 aaPredicted RBP7.04□□□□□ -1.28
LINC01088-202ENST00000505149 RGL4Q8IZJ4 473 aa7.04□□□□□ -1.28
LINC01088-202ENST00000505149 TRPM4Q8TD43 1214 aa7.04□□□□□ -1.28
LINC01088-202ENST00000505149 PIK3R5Q8WYR1 880 aa7.04□□□□□ -1.28
LINC01088-202ENST00000505149 GNB5O14775 395 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms