RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 RRAGCQ9HB90 399 aa9.54□□□□□ -0.88
UBE2D3-218ENST00000505009 AVENQ9NQS1 362 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-218ENST00000505009 KCNH4Q9UQ05 1017 aa9.54□□□□□ -0.88
UBE2D3-218ENST00000505009 TGFBR3LH3BV60 316 aa9.53□□□□□ -0.88
UBE2D3-218ENST00000505009 GRNP28799 593 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-218ENST00000505009 KCNQ4P56696 695 aa9.53□□□□□ -0.88
UBE2D3-218ENST00000505009 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
UBE2D3-218ENST00000505009 GDF11O95390 407 aa9.52□□□□□ -0.89
UBE2D3-218ENST00000505009 IER5Q5VY09 327 aa9.52□□□□□ -0.89
UBE2D3-218ENST00000505009 SAP130Q9H0E3 1048 aa9.52□□□□□ -0.89
UBE2D3-218ENST00000505009 HIF1AQ16665 826 aa9.51□□□□□ -0.89
UBE2D3-218ENST00000505009 CHSY3Q70JA7 882 aa9.51□□□□□ -0.89
UBE2D3-218ENST00000505009 BEND7Q8N7W2 519 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-218ENST00000505009 MYO19Q96H55 970 aa9.51□□□□□ -0.89
UBE2D3-218ENST00000505009 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-218ENST00000505009 IDH3AP50213 366 aa9.5□□□□□ -0.89
UBE2D3-218ENST00000505009 COX20Q5RI15 118 aa9.5□□□□□ -0.89
UBE2D3-218ENST00000505009 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
UBE2D3-218ENST00000505009 TMEM151AQ8N4L1 468 aa9.5□□□□□ -0.89
UBE2D3-218ENST00000505009 MDFIQ99750 246 aa9.5□□□□□ -0.89
UBE2D3-218ENST00000505009 SIN3BO75182 1162 aa9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 INPP5BP32019 993 aa9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 CLP1Q92989 425 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 BHMTQ93088 406 aa9.49□□□□□ -0.89
UBE2D3-218ENST00000505009 PHF20L1A8MW92 1017 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 MICAL2O94851 1124 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 DGKGP49619 791 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 FAM26DQ5JW98 314 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 USP20Q9Y2K6 914 aa9.48□□□□□ -0.89
UBE2D3-218ENST00000505009 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-218ENST00000505009 ELOA3DA6NLF2 546 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-218ENST00000505009 ELOA3BQ3SY89 546 aa9.47□□□□□ -0.89
UBE2D3-218ENST00000505009 ELOA3Q8NG57 546 aa9.47□□□□□ -0.89
UBE2D3-218ENST00000505009 SUV39H2Q9H5I1 410 aa9.47□□□□□ -0.89
UBE2D3-218ENST00000505009 MKL2Q9ULH7 1088 aa9.47□□□□□ -0.89
UBE2D3-218ENST00000505009 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.9
UBE2D3-218ENST00000505009 SCNN1AP37088 669 aa9.46□□□□□ -0.9
UBE2D3-218ENST00000505009 GSX2Q9BZM3 304 aa9.46□□□□□ -0.9
UBE2D3-218ENST00000505009 CARNS1A5YM72 827 aa9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 OPLAHO14841 1288 aa9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 TREML1Q86YW5 311 aa9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 ETFBKMTQ8IXQ9 262 aa9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 TNFRSF25Q93038 417 aa9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.9
UBE2D3-218ENST00000505009 TNFRSF10BO14763 440 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 ATP2B4P23634 1241 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 COL8A1P27658 744 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 ADH7P40394 386 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 ARSDP51689 593 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 TBC1D8BQ0IIM8 1120 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 C16orf46Q6P387 395 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 DCAF5Q96JK2 942 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 IGFLR1Q9H665 355 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 STARD13Q9Y3M8 1113 aa9.44□□□□□ -0.9
UBE2D3-218ENST00000505009 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
UBE2D3-218ENST00000505009 NFKB1P19838 968 aa9.43□□□□□ -0.9
UBE2D3-218ENST00000505009 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
UBE2D3-218ENST00000505009 KRT25Q7Z3Z0 450 aa9.43□□□□□ -0.9
UBE2D3-218ENST00000505009 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
UBE2D3-218ENST00000505009 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
UBE2D3-218ENST00000505009 ALAS2P22557 587 aa9.42□□□□□ -0.9
UBE2D3-218ENST00000505009 CCINQ13939 588 aa9.42□□□□□ -0.9
UBE2D3-218ENST00000505009 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
UBE2D3-218ENST00000505009 RGL4Q8IZJ4 473 aa9.42□□□□□ -0.9
UBE2D3-218ENST00000505009 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
UBE2D3-218ENST00000505009 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-218ENST00000505009 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-218ENST00000505009 EPB42P16452 691 aa9.41□□□□□ -0.9
UBE2D3-218ENST00000505009 PNMA5Q96PV4 448 aa9.41□□□□□ -0.9
UBE2D3-218ENST00000505009 ARID3AQ99856 593 aa9.41□□□□□ -0.9
UBE2D3-218ENST00000505009 UBE2OQ9C0C9 1292 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-218ENST00000505009 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-218ENST00000505009 GNB5O14775 395 aa9.4□□□□□ -0.9
UBE2D3-218ENST00000505009 PTCD1O75127 700 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-218ENST00000505009 ALBP02768 609 aa9.4□□□□□ -0.9
UBE2D3-218ENST00000505009 ITGB2P05107 769 aa9.4□□□□□ -0.9
UBE2D3-218ENST00000505009 TARSP26639 723 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-218ENST00000505009 TRIM11Q96F44 468 aa9.4□□□□□ -0.9
UBE2D3-218ENST00000505009 M0R082 166 aa9.39□□□□□ -0.91
UBE2D3-218ENST00000505009 SASH3O75995 380 aa9.39□□□□□ -0.91
UBE2D3-218ENST00000505009 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-218ENST00000505009 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
UBE2D3-218ENST00000505009 ZNF587Q96SQ5 575 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-218ENST00000505009 DNAJB12Q9NXW2 375 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-218ENST00000505009 KRBA1A5PL33 1030 aa9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 ZBTB39O15060 712 aa9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 COL9A3Q14050 684 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 MICALL1Q8N3F8 863 aa9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 SLC6A14Q9UN76 642 aa9.38□□□□□ -0.91
UBE2D3-218ENST00000505009 KCNMB2Q9Y691 235 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms