RNA–Protein interactions for RNA: ENST00000504880.5

SLC38A9-208, Transcript of solute carrier family 38 member 9, human

TSL 5

Gene SLC38A9, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-208	ENST00000504880	SPATA31A5	Q5VU36	1347 aa		27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	SPATA31A7	Q8IWB4	1347 aa		27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	RFX5	P48382	616 aa	Predicted RBP	27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	PRIM1	P49642	420 aa	Known RBP	27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	VSIG10	Q8N0Z9	540 aa		27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	COL15A1	P39059	1388 aa		27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	UBAP1L	F5GYI3	381 aa		27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	ANAPC15	P60006	121 aa		27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	RABL6	Q3YEC7	729 aa	Predicted RBP	27.75	■■■□□ 2.03
SLC38A9-208	ENST00000504880	NEK4	P51957	841 aa		27.74	■■■□□ 2.03
SLC38A9-208	ENST00000504880	CCDC8	Q9H0W5	538 aa	Predicted RBP	27.74	■■■□□ 2.03
SLC38A9-208	ENST00000504880	TLR7	Q9NYK1	1049 aa	Known RBP	27.74	■■■□□ 2.03
SLC38A9-208	ENST00000504880	EPB41L2	O43491	1005 aa	Known RBP	27.73	■■■□□ 2.03
SLC38A9-208	ENST00000504880	DDB1	Q16531	1140 aa		27.73	■■■□□ 2.03
SLC38A9-208	ENST00000504880	IL17RA	Q96F46	866 aa		27.73	■■■□□ 2.03
SLC38A9-208	ENST00000504880		H7C1W4	665 aa		27.72	■■■□□ 2.03
SLC38A9-208	ENST00000504880	COPRS	Q9NQ92	184 aa		27.72	■■■□□ 2.03
SLC38A9-208	ENST00000504880	CWC27	Q6UX04	472 aa	Known RBP	27.72	■■■□□ 2.03
SLC38A9-208	ENST00000504880	MARCH10	Q8NA82	808 aa	Predicted RBP	27.72	■■■□□ 2.03
SLC38A9-208	ENST00000504880	CWC25	Q9NXE8	425 aa	Predicted RBP	27.72	■■■□□ 2.03
SLC38A9-208	ENST00000504880	THRAP3	Q9Y2W1	955 aa	Known RBP	27.72	■■■□□ 2.03
SLC38A9-208	ENST00000504880	HSPA4	P34932	840 aa		27.71	■■■□□ 2.03
SLC38A9-208	ENST00000504880	PTPN12	Q05209	780 aa	Known RBP	27.71	■■■□□ 2.03
SLC38A9-208	ENST00000504880	FOXO4	P98177	505 aa		27.7	■■■□□ 2.03
SLC38A9-208	ENST00000504880	RAD50	Q92878	1312 aa		27.7	■■■□□ 2.02
SLC38A9-208	ENST00000504880	SSFA2	P28290	1259 aa		27.7	■■■□□ 2.02
SLC38A9-208	ENST00000504880	ACSBG1	Q96GR2	724 aa		27.7	■■■□□ 2.02
SLC38A9-208	ENST00000504880	LSG1	Q9H089	658 aa	Known RBP	27.7	■■■□□ 2.02
SLC38A9-208	ENST00000504880	CCDC9	Q9Y3X0	531 aa	Known RBP	27.7	■■■□□ 2.02
SLC38A9-208	ENST00000504880	DDX11L8	A8MPP1	907 aa		27.69	■■■□□ 2.02
SLC38A9-208	ENST00000504880	CYP19A1	P11511	503 aa	Predicted RBP	27.69	■■■□□ 2.02
SLC38A9-208	ENST00000504880	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.69	■■■□□ 2.02
SLC38A9-208	ENST00000504880	LMBR1L	Q6UX01	489 aa		27.68	■■■□□ 2.02
SLC38A9-208	ENST00000504880	ZGPAT	Q8N5A5	531 aa	Known RBP	27.68	■■■□□ 2.02
SLC38A9-208	ENST00000504880	EVI5L	Q96CN4	794 aa		27.68	■■■□□ 2.02
SLC38A9-208	ENST00000504880	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.68	■■■□□ 2.02
SLC38A9-208	ENST00000504880	DIAPH3	Q9NSV4	1193 aa		27.68	■■■□□ 2.02
SLC38A9-208	ENST00000504880	ZBTB1	Q9Y2K1	713 aa		27.68	■■■□□ 2.02
SLC38A9-208	ENST00000504880	STARD3NL	O95772	234 aa		27.67	■■■□□ 2.02
SLC38A9-208	ENST00000504880	ISCA1	Q9BUE6	129 aa		27.67	■■■□□ 2.02
SLC38A9-208	ENST00000504880	GBP4	Q96PP9	640 aa		27.67	■■■□□ 2.02
SLC38A9-208	ENST00000504880		A0A0G2JS52	829 aa		27.66	■■■□□ 2.02
SLC38A9-208	ENST00000504880	TRAK2	O60296	914 aa		27.66	■■■□□ 2.02
SLC38A9-208	ENST00000504880	CCDC191	Q8NCU4	936 aa		27.66	■■■□□ 2.02
SLC38A9-208	ENST00000504880	TMX3	Q96JJ7	454 aa		27.65	■■■□□ 2.02
SLC38A9-208	ENST00000504880	UPF3B	Q9BZI7	483 aa	Known RBP	27.65	■■■□□ 2.02
SLC38A9-208	ENST00000504880	BCL9L	Q86UU0	1499 aa		27.64	■■■□□ 2.02
SLC38A9-208	ENST00000504880	MCM2	P49736	904 aa		27.64	■■■□□ 2.02
SLC38A9-208	ENST00000504880	TFCP2	Q12800	502 aa		27.64	■■■□□ 2.02
SLC38A9-208	ENST00000504880	TCIRG1	Q13488	830 aa		27.64	■■■□□ 2.02
SLC38A9-208	ENST00000504880	BOLA2	Q9H3K6	86 aa		27.64	■■■□□ 2.02
SLC38A9-208	ENST00000504880	CWC22	Q9HCG8	908 aa	Known RBP	27.64	■■■□□ 2.02
SLC38A9-208	ENST00000504880	HLF	Q16534	295 aa		27.63	■■■□□ 2.01
SLC38A9-208	ENST00000504880	BARGIN	Q6ZT62	677 aa		27.63	■■■□□ 2.01
SLC38A9-208	ENST00000504880	KIAA1211	Q6ZU35	1233 aa		27.63	■■■□□ 2.01
SLC38A9-208	ENST00000504880	C8orf37	Q96NL8	207 aa		27.63	■■■□□ 2.01
SLC38A9-208	ENST00000504880	RUFY2	Q8WXA3	655 aa		27.63	■■■□□ 2.01
SLC38A9-208	ENST00000504880	PKP1	Q13835	747 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	TNNI3K	Q59H18	835 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	CHMP3	Q9Y3E7	222 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	SNX14	Q9Y5W7	946 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	FPGT-TNNI3K	V9GXZ4	949 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	CYP2E1	P05181	493 aa	Predicted RBP	27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	KIF6	Q6ZMV9	814 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	MAP3K15	Q6ZN16	1313 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	ARX	Q96QS3	562 aa		27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	DBNL	Q9UJU6	430 aa	Known RBP	27.62	■■■□□ 2.01
SLC38A9-208	ENST00000504880	NUCB2	P80303	420 aa		27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	FAM98C	Q17RN3	349 aa	Known RBP	27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	CLEC17A	Q6ZS10	378 aa		27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	RASEF	Q8IZ41	740 aa		27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	JCAD	Q9P266	1359 aa		27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	PTH1R	Q03431	593 aa		27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	NOL8	Q76FK4	1167 aa	Known RBP	27.6	■■■□□ 2.01
SLC38A9-208	ENST00000504880	ANKRD36C	Q5JPF3	1778 aa		27.59	■■■□□ 2.01
SLC38A9-208	ENST00000504880	FAM227B	Q96M60	508 aa		27.58	■■■□□ 2.01
SLC38A9-208	ENST00000504880	GZF1	Q9H116	711 aa	Predicted RBP	27.58	■■■□□ 2.01
SLC38A9-208	ENST00000504880	KCNQ2	O43526	872 aa		27.58	■■■□□ 2.01
SLC38A9-208	ENST00000504880	CUL4A	Q13619	759 aa		27.58	■■■□□ 2.01
SLC38A9-208	ENST00000504880	SYNE4	Q8N205	404 aa		27.58	■■■□□ 2.01
SLC38A9-208	ENST00000504880	GPT	P24298	496 aa		27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	NMI	Q13287	307 aa	Predicted RBP	27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	GIGYF2	Q6Y7W6	1299 aa	Known RBP	27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	ZNF594	Q96JF6	807 aa	Predicted RBP	27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	BAG4	O95429	457 aa	Known RBP	27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	ATG9A	Q7Z3C6	839 aa		27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	FAM89A	Q96GI7	184 aa		27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	NGLY1	Q96IV0	654 aa		27.57	■■■□□ 2
SLC38A9-208	ENST00000504880	FSD1	Q9BTV5	496 aa		27.56	■■■□□ 2
SLC38A9-208	ENST00000504880	NUP98	P52948	1817 aa		27.56	■■■□□ 2
SLC38A9-208	ENST00000504880	HIP1	O00291	1037 aa		27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	TRIM28	Q13263	835 aa	Known RBP	27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	EDC3	Q96F86	508 aa	Known RBP	27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	ATP5J	P18859	108 aa		27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	ITPK1	Q13572	414 aa		27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	DBNDD2	Q9BQY9	259 aa		27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	TBC1D2B	Q9UPU7	963 aa		27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	ZDHHC9	Q9Y397	364 aa		27.55	■■■□□ 2
SLC38A9-208	ENST00000504880	CCDC171	Q6TFL3	1326 aa		27.54	■■■□□ 2
SLC38A9-208	ENST00000504880	RREB1	Q92766	1687 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms