RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 FAM13BQ9NYF5 915 aa9.69□□□□□ -0.86
TRAPPC13-206ENST00000504751 HCN2Q9UL51 889 aa9.69□□□□□ -0.86
TRAPPC13-206ENST00000504751 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
TRAPPC13-206ENST00000504751 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 TRIP4Q15650 581 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 BRD7Q9NPI1 651 aa9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 PCDHGC4Q9Y5F7 938 aa9.68□□□□□ -0.86
TRAPPC13-206ENST00000504751 DCDC2BA2VCK2 349 aa9.67□□□□□ -0.86
TRAPPC13-206ENST00000504751 ANKRD33BA6NCL7 494 aa9.67□□□□□ -0.86
TRAPPC13-206ENST00000504751 ERCC3P19447 782 aa9.67□□□□□ -0.86
TRAPPC13-206ENST00000504751 USP5P45974 858 aa9.67□□□□□ -0.86
TRAPPC13-206ENST00000504751 KCNQ4P56696 695 aa9.67□□□□□ -0.86
TRAPPC13-206ENST00000504751 PIK3R5Q8WYR1 880 aa9.67□□□□□ -0.86
TRAPPC13-206ENST00000504751 GPR182O15218 404 aa9.66□□□□□ -0.86
TRAPPC13-206ENST00000504751 TNP2Q05952 138 aa9.66□□□□□ -0.86
TRAPPC13-206ENST00000504751 ZSCAN29Q8IWY8 852 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC13-206ENST00000504751 GTPBP3Q969Y2 492 aaKnown RBP9.66□□□□□ -0.86
TRAPPC13-206ENST00000504751 KCNMB2Q9Y691 235 aa9.66□□□□□ -0.86
TRAPPC13-206ENST00000504751 BNIP3LO60238 219 aa9.65□□□□□ -0.86
TRAPPC13-206ENST00000504751 EPB42P16452 691 aa9.65□□□□□ -0.86
TRAPPC13-206ENST00000504751 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
TRAPPC13-206ENST00000504751 KHNYNO15037 678 aaKnown RBP9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 TREHO43280 583 aa9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 MAPTP10636 758 aaKnown RBP9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 PCSK2P16519 638 aa9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 PDE3BQ13370 1112 aa9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 FOXD4L4Q8WXT5 416 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 NANOS1Q8WY41 292 aaKnown RBP9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 STRN4Q9NRL3 753 aa9.64□□□□□ -0.87
TRAPPC13-206ENST00000504751 RPLP1P05386 114 aaKnown RBP9.63□□□□□ -0.87
TRAPPC13-206ENST00000504751 SFSWAPQ12872 951 aaKnown RBP9.63□□□□□ -0.87
TRAPPC13-206ENST00000504751 LAMC2Q13753 1193 aa9.63□□□□□ -0.87
TRAPPC13-206ENST00000504751 DSC3Q14574 896 aa9.63□□□□□ -0.87
TRAPPC13-206ENST00000504751 ALKBH8Q96BT7 664 aaKnown RBP9.63□□□□□ -0.87
TRAPPC13-206ENST00000504751 ATXN7L1Q9ULK2 861 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC13-206ENST00000504751 A6NHS1 94 aa9.62□□□□□ -0.87
TRAPPC13-206ENST00000504751 FMR1Q06787 632 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRAPPC13-206ENST00000504751 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
TRAPPC13-206ENST00000504751 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
TRAPPC13-206ENST00000504751 C11orf16Q9NQ32 467 aa9.62□□□□□ -0.87
TRAPPC13-206ENST00000504751 KCNH4Q9UQ05 1017 aa9.62□□□□□ -0.87
TRAPPC13-206ENST00000504751 CDC14CA4D256 554 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 UBAP1LF5GYI3 381 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 XYLBO75191 536 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 EGFRP00533 1210 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 EHHADHQ08426 723 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 GRIN2CQ14957 1233 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 VWA5B2Q8N398 1253 aa9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 NXF1Q9UBU9 619 aaKnown RBP9.61□□□□□ -0.87
TRAPPC13-206ENST00000504751 H3BM21 787 aa9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 GPR25O00155 361 aa9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 CD33P20138 364 aa9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 COL19A1Q14993 1142 aa9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 C8orf34Q49A92 452 aa9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 PDE12Q6L8Q7 609 aaKnown RBP9.6□□□□□ -0.87
TRAPPC13-206ENST00000504751 VEGFBP49765 207 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 CFHR5Q9BXR6 569 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 MARK1Q9P0L2 795 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 FNDC3AQ9Y2H6 1198 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
TRAPPC13-206ENST00000504751 FGFR3P22607 806 aa9.58□□□□□ -0.88
TRAPPC13-206ENST00000504751 FAM182BQ5T319 152 aa9.58□□□□□ -0.88
TRAPPC13-206ENST00000504751 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
TRAPPC13-206ENST00000504751 GSX2Q9BZM3 304 aa9.58□□□□□ -0.88
TRAPPC13-206ENST00000504751 PHF24Q9UPV7 400 aa9.58□□□□□ -0.88
TRAPPC13-206ENST00000504751 SPEM2Q0P670 501 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 ZNF787Q6DD87 383 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 FOXR1Q6PIV2 292 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 ZNF438Q7Z4V0 828 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 TTC16Q8NEE8 873 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 SLC30A3Q99726 388 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 NIF3L1Q9GZT8 377 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 ELP3Q9H9T3 547 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 TMEM63CQ9P1W3 806 aa9.57□□□□□ -0.88
TRAPPC13-206ENST00000504751 TNFRSF21O75509 655 aa9.56□□□□□ -0.88
TRAPPC13-206ENST00000504751 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
TRAPPC13-206ENST00000504751 CCINQ13939 588 aa9.56□□□□□ -0.88
TRAPPC13-206ENST00000504751 GAS6Q14393 721 aa9.56□□□□□ -0.88
TRAPPC13-206ENST00000504751 RBM47A0AV96 593 aaKnown RBP9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 PLCB3Q01970 1234 aa9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 ORC1Q13415 861 aa9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 NLRP13Q86W25 1043 aa9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 BCL2L13Q9BXK5 485 aa9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC13-206ENST00000504751 SASH3O75995 380 aa9.54□□□□□ -0.88
TRAPPC13-206ENST00000504751 CTBSQ01459 385 aa9.54□□□□□ -0.88
TRAPPC13-206ENST00000504751 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
TRAPPC13-206ENST00000504751 ZFATQ9P243 1243 aa9.54□□□□□ -0.88
TRAPPC13-206ENST00000504751 ENOX2Q16206 610 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms