RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 CPS1P31327 1500 aa8.72□□□□□ -1.01
CSNK1A1-204ENST00000504676 TWISTNBQ3B726 338 aaPredicted RBP8.71□□□□□ -1.01
CSNK1A1-204ENST00000504676 C3orf67Q6ZVT6 689 aa8.71□□□□□ -1.01
CSNK1A1-204ENST00000504676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.71□□□□□ -1.01
CSNK1A1-204ENST00000504676 RPAP2Q8IXW5 612 aaPredicted RBP8.71□□□□□ -1.01
CSNK1A1-204ENST00000504676 SLKQ9H2G2 1235 aaPredicted RBP8.71□□□□□ -1.01
CSNK1A1-204ENST00000504676 MBIPQ9NS73 344 aa8.71□□□□□ -1.01
CSNK1A1-204ENST00000504676 PTPRCP08575 1304 aa8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 MON2Q7Z3U7 1717 aa8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 ELOAQ14241 798 aaKnown RBP8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 SKOR2Q2VWA4 1001 aaPredicted RBP8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 IQSEC3Q9UPP2 1182 aaPredicted RBP8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 NDUFB9Q9Y6M9 179 aa8.71□□□□□ -1.02
CSNK1A1-204ENST00000504676 NRXN3Q9Y4C0 1643 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 MAP2P11137 1827 aaKnown RBP8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 FSD2A1L4K1 749 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 G3V3G9 751 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 HSP90AB2PQ58FF8 381 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 PRR7Q8TB68 274 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 SPOCK3Q9BQ16 436 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 TTC21BQ7Z4L5 1316 aa8.7□□□□□ -1.02
CSNK1A1-204ENST00000504676 NRKQ7Z2Y5 1582 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 METP08581 1390 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 CHL1O00533 1208 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 AP1G2O75843 785 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 GTF2F1P35269 517 aaKnown RBP eCLIP8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 DSG2Q14126 1118 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 CLEC17AQ6ZS10 378 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 TBC1D9Q6ZT07 1266 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 AKAP12Q02952 1782 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 C3P01024 1663 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
CSNK1A1-204ENST00000504676 CDC45O75419 566 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 EIF3JO75822 258 aaKnown RBP8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 IBSPP21815 317 aaPredicted RBP8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 NME9Q86XW9 330 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 GBP4Q96PP9 640 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 TMEM2Q9UHN6 1383 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 GOLGA6L3A6NEY3 463 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 SCAMP3O14828 347 aaKnown RBP8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 HTATSF1O43719 755 aaKnown RBP8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 HMOX1P09601 288 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 LDLRAD1Q5T700 205 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 ANKRD44Q8N8A2 993 aa8.68□□□□□ -1.02
CSNK1A1-204ENST00000504676 TTC21AQ8NDW8 1320 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 ATP2B1P20020 1258 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 PAX3P23760 479 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 MRE11P49959 708 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 LONRF3Q496Y0 759 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 LCE2DQ5TA82 110 aaPredicted RBP8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 CYB5RLQ6IPT4 315 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 SIRT2Q8IXJ6 389 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 C8orf58Q8NAV2 365 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 BRINP2Q9C0B6 783 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 BABAM1Q9NWV8 329 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 TNRQ92752 1358 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 PLEKHG1Q9ULL1 1385 aa8.67□□□□□ -1.02
CSNK1A1-204ENST00000504676 OVOS2A0A0J9YW53 1432 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 OVOS2Q6IE36 1432 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 POTEMA6NI47 508 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 RAB3GAP1Q15042 981 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 RABEP1Q15276 862 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 ARHGEF10O15013 1369 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 K7ELQ4 463 aaPredicted RBP8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 SCNN1AP37088 669 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 APLP1P51693 650 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 FOXD4Q12950 439 aaPredicted RBP8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 MRPL58Q14197 206 aaKnown RBP8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 FAM43BQ6ZT52 329 aaPredicted RBP8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 JAZF1Q86VZ6 243 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 KIF2CQ99661 725 aa8.66□□□□□ -1.02
CSNK1A1-204ENST00000504676 ITSN1Q15811 1721 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 SSH2Q76I76 1423 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 HMGB1P1B2RPK0 211 aaPredicted RBP8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 HMMRO75330 724 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 EIF4A2Q14240 407 aaKnown RBP8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 QPCTQ16769 361 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 PLEKHM2Q8IWE5 1019 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 DDX12PQ92771 950 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 TMEM121BQ9BXQ6 578 aaPredicted RBP8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 OSBPL3Q9H4L5 887 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 ZSWIM4Q9H7M6 989 aa8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
CSNK1A1-204ENST00000504676 EPB41L2O43491 1005 aaKnown RBP8.64□□□□□ -1.03
CSNK1A1-204ENST00000504676 CCT4P50991 539 aaKnown RBP8.64□□□□□ -1.03
CSNK1A1-204ENST00000504676 PLEKHG6Q3KR16 790 aa8.64□□□□□ -1.03
CSNK1A1-204ENST00000504676 ZFYVE27Q5T4F4 411 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms