RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
PDGFRA-204ENST00000504461 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
PDGFRA-204ENST00000504461 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDGFRA-204ENST00000504461 SCN4AP35499 1836 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 NTSR2O95665 410 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 CRY2Q49AN0 593 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 CFAP44Q96MT7 982 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 NLRP3Q96P20 1036 aa16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
PDGFRA-204ENST00000504461 RIC1Q4ADV7 1423 aa16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 APAF1O14727 1248 aa16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 DDNO94850 711 aaPredicted RBP16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 ZNF277Q9NRM2 450 aaPredicted RBP16.12■□□□□ 0.17
PDGFRA-204ENST00000504461 HOXB7P09629 217 aa16.11■□□□□ 0.17
PDGFRA-204ENST00000504461 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
PDGFRA-204ENST00000504461 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
PDGFRA-204ENST00000504461 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
PDGFRA-204ENST00000504461 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
PDGFRA-204ENST00000504461 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
PDGFRA-204ENST00000504461 POTECB2RU33 542 aa16.1■□□□□ 0.17
PDGFRA-204ENST00000504461 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
PDGFRA-204ENST00000504461 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
PDGFRA-204ENST00000504461 CRAMP1Q96RY5 1269 aa16.1■□□□□ 0.17
PDGFRA-204ENST00000504461 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
PDGFRA-204ENST00000504461 TCERG1O14776 1098 aaKnown RBP16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 GRIPAP1Q4V328 841 aa16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 TAF1P21675 1872 aa16.09■□□□□ 0.17
PDGFRA-204ENST00000504461 IQCA1LA6NCM1 817 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 GNAI1P63096 354 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 HTRA3P83110 453 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 NLRP10Q86W26 655 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 DNAJC5GQ8N7S2 189 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 JDP2Q8WYK2 163 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 PSMD1Q99460 953 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
PDGFRA-204ENST00000504461 CCDC184Q52MB2 194 aa16.07■□□□□ 0.16
PDGFRA-204ENST00000504461 MIER1Q8N108 512 aa16.07■□□□□ 0.16
PDGFRA-204ENST00000504461 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
PDGFRA-204ENST00000504461 IFT57Q9NWB7 429 aa16.07■□□□□ 0.16
PDGFRA-204ENST00000504461 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
PDGFRA-204ENST00000504461 DDX60Q8IY21 1712 aaKnown RBP16.06■□□□□ 0.16
PDGFRA-204ENST00000504461 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
PDGFRA-204ENST00000504461 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
PDGFRA-204ENST00000504461 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
PDGFRA-204ENST00000504461 C3orf67Q6ZVT6 689 aa16.06■□□□□ 0.16
PDGFRA-204ENST00000504461 ELL2O00472 640 aaPredicted RBP16.05■□□□□ 0.16
PDGFRA-204ENST00000504461 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
PDGFRA-204ENST00000504461 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 FZD9O00144 591 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 BBOX1O75936 387 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 DDX46Q7L014 1031 aaKnown RBP16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 ZNF428Q96B54 188 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 KLRG1Q96E93 195 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
PDGFRA-204ENST00000504461 ABCC4O15439 1325 aa16.03■□□□□ 0.16
PDGFRA-204ENST00000504461 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
PDGFRA-204ENST00000504461 FAM9BQ8IZU0 186 aa16.03■□□□□ 0.16
PDGFRA-204ENST00000504461 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
PDGFRA-204ENST00000504461 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
PDGFRA-204ENST00000504461 SNED1Q8TER0 1413 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 GPC2Q8N158 579 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 SUPT20HQ8NEM7 779 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 TAF1DQ9H5J8 278 aaPredicted RBP16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 GJA3Q9Y6H8 435 aa16.02■□□□□ 0.16
PDGFRA-204ENST00000504461 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 POTEJP0CG39 1038 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 SP8Q8IXZ3 490 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 NIM1KQ8IY84 436 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 FAM89AQ96GI7 184 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
PDGFRA-204ENST00000504461 PPIP5K2O43314 1243 aa16■□□□□ 0.15
PDGFRA-204ENST00000504461 EPHX2P34913 555 aa16■□□□□ 0.15
PDGFRA-204ENST00000504461 CCDC27Q2M243 656 aa16■□□□□ 0.15
PDGFRA-204ENST00000504461 RTL5Q5HYW3 569 aaPredicted RBP16■□□□□ 0.15
PDGFRA-204ENST00000504461 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
PDGFRA-204ENST00000504461 DPP8Q6V1X1 898 aaPredicted RBP16■□□□□ 0.15
PDGFRA-204ENST00000504461 PNMA8AQ86V59 439 aaPredicted RBP16■□□□□ 0.15
PDGFRA-204ENST00000504461 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
PDGFRA-204ENST00000504461 VPS33BQ9H267 617 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms