RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
SSBP2-202ENST00000504136 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
SSBP2-202ENST00000504136 ADGRD1Q6QNK2 874 aa11.86□□□□□ -0.51
SSBP2-202ENST00000504136 IL17REQ8NFR9 667 aa11.86□□□□□ -0.51
SSBP2-202ENST00000504136 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
SSBP2-202ENST00000504136 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 INTS5Q6P9B9 1019 aaKnown RBP11.85□□□□□ -0.51
SSBP2-202ENST00000504136 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 PHACTR3Q96KR7 559 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
SSBP2-202ENST00000504136 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 C10orf71Q711Q0 1435 aa11.85□□□□□ -0.51
SSBP2-202ENST00000504136 DLG5Q8TDM6 1919 aa11.84□□□□□ -0.51
SSBP2-202ENST00000504136 HRO43593 1189 aa11.84□□□□□ -0.51
SSBP2-202ENST00000504136 CYP19A1P11511 503 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-202ENST00000504136 GYS1P13807 737 aa11.84□□□□□ -0.51
SSBP2-202ENST00000504136 TRAPPC3LQ5T215 181 aa11.84□□□□□ -0.51
SSBP2-202ENST00000504136 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
SSBP2-202ENST00000504136 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
SSBP2-202ENST00000504136 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
SSBP2-202ENST00000504136 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
SSBP2-202ENST00000504136 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
SSBP2-202ENST00000504136 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
SSBP2-202ENST00000504136 HTATSF1O43719 755 aaKnown RBP11.83□□□□□ -0.52
SSBP2-202ENST00000504136 YY1P25490 414 aa11.83□□□□□ -0.52
SSBP2-202ENST00000504136 SLC39A6Q13433 755 aa11.83□□□□□ -0.52
SSBP2-202ENST00000504136 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
SSBP2-202ENST00000504136 UTRNP46939 3433 aa11.83□□□□□ -0.52
SSBP2-202ENST00000504136 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
SSBP2-202ENST00000504136 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
SSBP2-202ENST00000504136 U2AF1L5P0DN76 240 aaPredicted RBP11.82□□□□□ -0.52
SSBP2-202ENST00000504136 U2AF1Q01081 240 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP2-202ENST00000504136 RALBP1Q15311 655 aa11.82□□□□□ -0.52
SSBP2-202ENST00000504136 PROX2Q3B8N5 592 aa11.82□□□□□ -0.52
SSBP2-202ENST00000504136 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
SSBP2-202ENST00000504136 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
SSBP2-202ENST00000504136 MMP10P09238 476 aa11.81□□□□□ -0.52
SSBP2-202ENST00000504136 TEFQ10587 303 aa11.81□□□□□ -0.52
SSBP2-202ENST00000504136 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
SSBP2-202ENST00000504136 PLEKHF1Q96S99 279 aa11.81□□□□□ -0.52
SSBP2-202ENST00000504136 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
SSBP2-202ENST00000504136 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
SSBP2-202ENST00000504136 COL15A1P39059 1388 aa11.8□□□□□ -0.52
SSBP2-202ENST00000504136 YBX3P16989 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSBP2-202ENST00000504136 RFC4P35249 363 aa11.8□□□□□ -0.52
SSBP2-202ENST00000504136 PTGDRQ13258 359 aa11.8□□□□□ -0.52
SSBP2-202ENST00000504136 ZNF496Q96IT1 587 aaPredicted RBP11.8□□□□□ -0.52
SSBP2-202ENST00000504136 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
SSBP2-202ENST00000504136 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
SSBP2-202ENST00000504136 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
SSBP2-202ENST00000504136 TEX13AQ9BXU3 409 aaPredicted RBP11.79□□□□□ -0.52
SSBP2-202ENST00000504136 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
SSBP2-202ENST00000504136 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
SSBP2-202ENST00000504136 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
SSBP2-202ENST00000504136 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
SSBP2-202ENST00000504136 N4BP2Q86UW6 1770 aaPredicted RBP11.78□□□□□ -0.52
SSBP2-202ENST00000504136 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 GPR37O15354 613 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 TM4SF1P30408 202 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 EIF5P55010 431 aaKnown RBP11.78□□□□□ -0.52
SSBP2-202ENST00000504136 TGFB2P61812 414 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 GPR162Q16538 588 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
SSBP2-202ENST00000504136 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.52
SSBP2-202ENST00000504136 STARD3NLO95772 234 aa11.77□□□□□ -0.53
SSBP2-202ENST00000504136 PRSS12P56730 875 aa11.77□□□□□ -0.53
SSBP2-202ENST00000504136 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
SSBP2-202ENST00000504136 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.53
SSBP2-202ENST00000504136 FAM198AQ9UFP1 575 aa11.77□□□□□ -0.53
SSBP2-202ENST00000504136 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
SSBP2-202ENST00000504136 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
SSBP2-202ENST00000504136 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
SSBP2-202ENST00000504136 ADCY9O60503 1353 aa11.77□□□□□ -0.53
SSBP2-202ENST00000504136 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
SSBP2-202ENST00000504136 DDR1Q08345 913 aa11.76□□□□□ -0.53
SSBP2-202ENST00000504136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
SSBP2-202ENST00000504136 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
SSBP2-202ENST00000504136 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
SSBP2-202ENST00000504136 RABGEF1Q9UJ41 708 aa11.76□□□□□ -0.53
SSBP2-202ENST00000504136 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
SSBP2-202ENST00000504136 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
SSBP2-202ENST00000504136 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
SSBP2-202ENST00000504136 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
SSBP2-202ENST00000504136 MCM10Q7L590 875 aa11.75□□□□□ -0.53
SSBP2-202ENST00000504136 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
SSBP2-202ENST00000504136 RTF1Q92541 710 aaKnown RBP11.75□□□□□ -0.53
SSBP2-202ENST00000504136 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
SSBP2-202ENST00000504136 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
SSBP2-202ENST00000504136 A0A087WZG4 1122 aa11.74□□□□□ -0.53
SSBP2-202ENST00000504136 KCNQ3O43525 872 aa11.74□□□□□ -0.53
SSBP2-202ENST00000504136 USPL1Q5W0Q7 1092 aa11.74□□□□□ -0.53
SSBP2-202ENST00000504136 ZPR1O75312 459 aa11.73□□□□□ -0.53
SSBP2-202ENST00000504136 KCNA3P22001 575 aa11.73□□□□□ -0.53
SSBP2-202ENST00000504136 TAF7Q15545 349 aaPredicted RBP11.73□□□□□ -0.53
SSBP2-202ENST00000504136 ANKRD31Q8N7Z5 1873 aa11.72□□□□□ -0.53
SSBP2-202ENST00000504136 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms