RNA–Protein interactions for RNA: ENST00000504121.5

SLC1A3-205, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-205ENST00000504121 PPP2R1AP30153 589 aa12.78□□□□□ -0.36
SLC1A3-205ENST00000504121 NIP7Q9Y221 180 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC1A3-205ENST00000504121 CNTNAP1P78357 1384 aa12.78□□□□□ -0.36
SLC1A3-205ENST00000504121 COL11A2P13942 1736 aaPredicted RBP12.77□□□□□ -0.36
SLC1A3-205ENST00000504121 TMEM88BA6NKF7 163 aa12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 HACL1Q9UJ83 578 aa12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
SLC1A3-205ENST00000504121 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 ITGBL1O95965 494 aaPredicted RBP12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 GTF2E1P29083 439 aaPredicted RBP12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 PARP10Q53GL7 1025 aa12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 PCNTO95613 3336 aa12.76□□□□□ -0.37
SLC1A3-205ENST00000504121 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
SLC1A3-205ENST00000504121 KCNQ3O43525 872 aa12.75□□□□□ -0.37
SLC1A3-205ENST00000504121 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
SLC1A3-205ENST00000504121 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
SLC1A3-205ENST00000504121 SNED1Q8TER0 1413 aa12.75□□□□□ -0.37
SLC1A3-205ENST00000504121 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
SLC1A3-205ENST00000504121 HTRA3P83110 453 aa12.74□□□□□ -0.37
SLC1A3-205ENST00000504121 SLC10A5Q5PT55 438 aa12.74□□□□□ -0.37
SLC1A3-205ENST00000504121 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
SLC1A3-205ENST00000504121 PPP1R42Q7Z4L9 355 aa12.74□□□□□ -0.37
SLC1A3-205ENST00000504121 TMX4Q9H1E5 349 aaPredicted RBP12.74□□□□□ -0.37
SLC1A3-205ENST00000504121 EPHX2P34913 555 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 CTCFP49711 727 aaPredicted RBP12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 EIF6P56537 245 aaKnown RBP12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 EIF4A1P60842 406 aaKnown RBP12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 MCM10Q7L590 875 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
SLC1A3-205ENST00000504121 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 SYNE4Q8N205 404 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 AIDAQ96BJ3 306 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 HHIPL1Q96JK4 782 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
SLC1A3-205ENST00000504121 BBOX1O75936 387 aa12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
SLC1A3-205ENST00000504121 LMOD1P29536 600 aaPredicted RBP12.7□□□□□ -0.38
SLC1A3-205ENST00000504121 ECE1P42892 770 aa12.7□□□□□ -0.38
SLC1A3-205ENST00000504121 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
SLC1A3-205ENST00000504121 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
SLC1A3-205ENST00000504121 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 CA12O43570 354 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 HLFQ16534 295 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 PGAP2Q9UHJ9 254 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 NUP98P52948 1817 aa12.69□□□□□ -0.38
SLC1A3-205ENST00000504121 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
SLC1A3-205ENST00000504121 HOXB7P09629 217 aa12.68□□□□□ -0.38
SLC1A3-205ENST00000504121 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
SLC1A3-205ENST00000504121 MAP2K2P36507 400 aa12.68□□□□□ -0.38
SLC1A3-205ENST00000504121 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
SLC1A3-205ENST00000504121 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
SLC1A3-205ENST00000504121 NTSR2O95665 410 aa12.67□□□□□ -0.38
SLC1A3-205ENST00000504121 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
SLC1A3-205ENST00000504121 VEGFBP49765 207 aa12.67□□□□□ -0.38
SLC1A3-205ENST00000504121 RALBP1Q15311 655 aa12.67□□□□□ -0.38
SLC1A3-205ENST00000504121 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
SLC1A3-205ENST00000504121 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
SLC1A3-205ENST00000504121 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 DCTN1Q14203 1278 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 LRP10Q7Z4F1 713 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 LARGE2Q8N3Y3 721 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 DDX21Q9NR30 783 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 CLEC11AQ9Y240 323 aa12.66□□□□□ -0.38
SLC1A3-205ENST00000504121 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
SLC1A3-205ENST00000504121 TNIP1Q15025 636 aa12.65□□□□□ -0.38
SLC1A3-205ENST00000504121 EAPPQ56P03 285 aaPredicted RBP12.65□□□□□ -0.38
SLC1A3-205ENST00000504121 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms