RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ALBP02768 609 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 GATA4P43694 442 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 PTK7Q13308 1070 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
SUB1-204ENST00000504016 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 IGFLR1Q9H665 355 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 VRTNQ9H8Y1 702 aa8.54□□□□□ -1.04
SUB1-204ENST00000504016 A6NJR5 290 aa8.53□□□□□ -1.04
SUB1-204ENST00000504016 APBA3O96018 575 aa8.53□□□□□ -1.04
SUB1-204ENST00000504016 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
SUB1-204ENST00000504016 DOC2BQ14184 412 aa8.53□□□□□ -1.04
SUB1-204ENST00000504016 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
SUB1-204ENST00000504016 PRDM6Q9NQX0 595 aa8.53□□□□□ -1.04
SUB1-204ENST00000504016 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
SUB1-204ENST00000504016 RTN1Q16799 776 aa8.52□□□□□ -1.05
SUB1-204ENST00000504016 UBE2OQ9C0C9 1292 aaKnown RBP8.52□□□□□ -1.05
SUB1-204ENST00000504016 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L10C9JJH3 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L12C9JPN9 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L21D6R901 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
SUB1-204ENST00000504016 ANKMY2Q8IV38 441 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
SUB1-204ENST00000504016 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
SUB1-204ENST00000504016 LILRB5O75023 590 aa8.5□□□□□ -1.05
SUB1-204ENST00000504016 IGFBP4P22692 258 aa8.5□□□□□ -1.05
SUB1-204ENST00000504016 EFCC1Q9HA90 598 aa8.5□□□□□ -1.05
SUB1-204ENST00000504016 TGFBR3LH3BV60 316 aa8.49□□□□□ -1.05
SUB1-204ENST00000504016 NID1P14543 1247 aa8.49□□□□□ -1.05
SUB1-204ENST00000504016 TRAPPC3LQ5T215 181 aa8.49□□□□□ -1.05
SUB1-204ENST00000504016 IER5Q5VY09 327 aa8.49□□□□□ -1.05
SUB1-204ENST00000504016 C20orf204Q6ZNR8 217 aa8.49□□□□□ -1.05
SUB1-204ENST00000504016 SEMA6BQ9H3T3 888 aa8.49□□□□□ -1.05
SUB1-204ENST00000504016 CCINQ13939 588 aa8.48□□□□□ -1.05
SUB1-204ENST00000504016 NACC1Q96RE7 527 aa8.48□□□□□ -1.05
SUB1-204ENST00000504016 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
SUB1-204ENST00000504016 SLC6A14Q9UN76 642 aa8.48□□□□□ -1.05
SUB1-204ENST00000504016 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
SUB1-204ENST00000504016 GRIK4Q16099 956 aa8.47□□□□□ -1.05
SUB1-204ENST00000504016 XP32Q5T750 250 aa8.47□□□□□ -1.05
SUB1-204ENST00000504016 NUDT8Q8WV74 236 aa8.47□□□□□ -1.05
SUB1-204ENST00000504016 VTI1AQ96AJ9 217 aa8.47□□□□□ -1.05
SUB1-204ENST00000504016 JPH1Q9HDC5 661 aaPredicted RBP8.47□□□□□ -1.05
SUB1-204ENST00000504016 DNAJB12Q9NXW2 375 aaKnown RBP8.47□□□□□ -1.05
SUB1-204ENST00000504016 BCS1LQ9Y276 419 aa8.47□□□□□ -1.05
SUB1-204ENST00000504016 EPB42P16452 691 aa8.46□□□□□ -1.06
SUB1-204ENST00000504016 NFKB1P19838 968 aa8.46□□□□□ -1.06
SUB1-204ENST00000504016 KLK14Q9P0G3 267 aa8.46□□□□□ -1.06
SUB1-204ENST00000504016 DMGDHQ9UI17 866 aaKnown RBP8.46□□□□□ -1.06
SUB1-204ENST00000504016 IDH3AP50213 366 aa8.45□□□□□ -1.06
SUB1-204ENST00000504016 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
SUB1-204ENST00000504016 ZNF777Q9ULD5 760 aaPredicted RBP8.45□□□□□ -1.06
SUB1-204ENST00000504016 DGKZQ13574 1117 aa8.44□□□□□ -1.06
SUB1-204ENST00000504016 FAM200AQ8TCP9 573 aa8.44□□□□□ -1.06
SUB1-204ENST00000504016 ARXQ96QS3 562 aa8.44□□□□□ -1.06
SUB1-204ENST00000504016 FOXO3O43524 673 aa8.43□□□□□ -1.06
SUB1-204ENST00000504016 RGS9O75916 674 aaPredicted RBP8.43□□□□□ -1.06
SUB1-204ENST00000504016 RFX1P22670 979 aa8.43□□□□□ -1.06
SUB1-204ENST00000504016 WEE1P30291 646 aa8.43□□□□□ -1.06
SUB1-204ENST00000504016 RAC1P63000 192 aa8.43□□□□□ -1.06
SUB1-204ENST00000504016 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
SUB1-204ENST00000504016 A0A0A0MRY4 1105 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 C9orf172C9J069 976 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 INPP5BP32019 993 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 ARSDP51689 593 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 PCSK7Q16549 785 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
SUB1-204ENST00000504016 C11orf91Q3C1V1 193 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 KRT25Q7Z3Z0 450 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 Q8N3U1 123 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 QTRT2Q9H974 415 aaKnown RBP8.42□□□□□ -1.06
SUB1-204ENST00000504016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.42□□□□□ -1.063e-6■■■■■ 37.3
SUB1-204ENST00000504016 TPSG1Q9NRR2 321 aa8.42□□□□□ -1.06
SUB1-204ENST00000504016 MICAL2O94851 1124 aa8.41□□□□□ -1.06
SUB1-204ENST00000504016 ITGB7P26010 798 aa8.41□□□□□ -1.06
SUB1-204ENST00000504016 AFF1P51825 1210 aaKnown RBP8.41□□□□□ -1.06
SUB1-204ENST00000504016 FAM35AQ86V20 835 aa8.41□□□□□ -1.06
SUB1-204ENST00000504016 CPB1P15086 417 aa8.4□□□□□ -1.06
SUB1-204ENST00000504016 ELNP15502 786 aa8.4□□□□□ -1.06
SUB1-204ENST00000504016 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.06
SUB1-204ENST00000504016 DMRTC2Q8IXT2 367 aaPredicted RBP8.4□□□□□ -1.06
SUB1-204ENST00000504016 NAGPAQ9UK23 515 aa8.4□□□□□ -1.06
SUB1-204ENST00000504016 MAP3K6O95382 1288 aa8.39□□□□□ -1.07
SUB1-204ENST00000504016 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
SUB1-204ENST00000504016 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
SUB1-204ENST00000504016 DHX32Q7L7V1 743 aaKnown RBP8.39□□□□□ -1.07
SUB1-204ENST00000504016 MYO19Q96H55 970 aa8.39□□□□□ -1.07
SUB1-204ENST00000504016 SASH3O75995 380 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms