RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SMC1BQ8NDV3 1235 aa28.67■■■□□ 2.18
LSM6-203ENST00000503982 C7orf43Q8WVR3 580 aa28.67■■■□□ 2.18
LSM6-203ENST00000503982 RBM17Q96I25 401 aaKnown RBP28.67■■■□□ 2.18
LSM6-203ENST00000503982 UTP14AQ9BVJ6 771 aaKnown RBP28.67■■■□□ 2.18
LSM6-203ENST00000503982 CHPF2Q9P2E5 772 aa28.67■■■□□ 2.18
LSM6-203ENST00000503982 LRP10Q7Z4F1 713 aa28.66■■■□□ 2.18
LSM6-203ENST00000503982 CFAP44Q96MT7 982 aa28.66■■■□□ 2.18
LSM6-203ENST00000503982 ZNF277Q9NRM2 450 aaPredicted RBP28.66■■■□□ 2.18
LSM6-203ENST00000503982 TCERG1O14776 1098 aaKnown RBP28.65■■■□□ 2.18
LSM6-203ENST00000503982 NLRP3Q96P20 1036 aa28.65■■■□□ 2.18
LSM6-203ENST00000503982 WDR90Q96KV7 1748 aa28.65■■■□□ 2.18
LSM6-203ENST00000503982 CALD1Q05682 793 aaKnown RBP28.64■■■□□ 2.18
LSM6-203ENST00000503982 CRY2Q49AN0 593 aa28.64■■■□□ 2.18
LSM6-203ENST00000503982 RIC1Q4ADV7 1423 aa28.63■■■□□ 2.17
LSM6-203ENST00000503982 DDNO94850 711 aaPredicted RBP28.63■■■□□ 2.17
LSM6-203ENST00000503982 MBIPQ9NS73 344 aa28.63■■■□□ 2.17
LSM6-203ENST00000503982 HOXB7P09629 217 aa28.62■■■□□ 2.17
LSM6-203ENST00000503982 DUSP27Q5VZP5 1158 aa28.62■■■□□ 2.17
LSM6-203ENST00000503982 SYNE4Q8N205 404 aa28.62■■■□□ 2.17
LSM6-203ENST00000503982 TMX4Q9H1E5 349 aaPredicted RBP28.62■■■□□ 2.17
LSM6-203ENST00000503982 GNAI1P63096 354 aa28.61■■■□□ 2.17
LSM6-203ENST00000503982 DBF4Q9UBU7 674 aaPredicted RBP28.61■■■□□ 2.17
LSM6-203ENST00000503982 ZNF428Q96B54 188 aa28.6■■■□□ 2.17
LSM6-203ENST00000503982 TRMT112Q9UI30 125 aaKnown RBP28.6■■■□□ 2.17
LSM6-203ENST00000503982 PPEF1O14829 653 aaPredicted RBP28.59■■■□□ 2.17
LSM6-203ENST00000503982 IARSP41252 1262 aaKnown RBP28.59■■■□□ 2.17
LSM6-203ENST00000503982 TCIRG1Q13488 830 aa28.59■■■□□ 2.17
LSM6-203ENST00000503982 LAMB2P55268 1798 aa28.58■■■□□ 2.17
LSM6-203ENST00000503982 ELL2O00472 640 aaPredicted RBP28.58■■■□□ 2.17
LSM6-203ENST00000503982 HOXA10P31260 410 aaPredicted RBP28.58■■■□□ 2.17
LSM6-203ENST00000503982 CC2D2BQ6DHV5 1058 aa28.58■■■□□ 2.17
LSM6-203ENST00000503982 C3orf67Q6ZVT6 689 aa28.58■■■□□ 2.17
LSM6-203ENST00000503982 NLRP10Q86W26 655 aa28.58■■■□□ 2.17
LSM6-203ENST00000503982 CRAMP1Q96RY5 1269 aa28.58■■■□□ 2.17
LSM6-203ENST00000503982 IFT57Q9NWB7 429 aa28.58■■■□□ 2.17
LSM6-203ENST00000503982 HTRA3P83110 453 aa28.57■■■□□ 2.16
LSM6-203ENST00000503982 POTECB2RU33 542 aa28.56■■■□□ 2.16
LSM6-203ENST00000503982 HCLS1P14317 486 aaPredicted RBP28.56■■■□□ 2.16
LSM6-203ENST00000503982 RNF123Q5XPI4 1314 aa28.56■■■□□ 2.16
LSM6-203ENST00000503982 ANKRD13DQ6ZTN6 518 aa28.56■■■□□ 2.16
LSM6-203ENST00000503982 PLBD2Q8NHP8 589 aa28.56■■■□□ 2.16
LSM6-203ENST00000503982 JDP2Q8WYK2 163 aa28.56■■■□□ 2.16
LSM6-203ENST00000503982 HYPKQ9NX55 129 aa28.56■■■□□ 2.16
LSM6-203ENST00000503982 ANP32CO43423 234 aa28.55■■■□□ 2.16
LSM6-203ENST00000503982 CCDC184Q52MB2 194 aa28.55■■■□□ 2.16
LSM6-203ENST00000503982 SH3TC1Q8TE82 1336 aa28.54■■■□□ 2.16
LSM6-203ENST00000503982 IQCA1LA6NCM1 817 aa28.54■■■□□ 2.16
LSM6-203ENST00000503982 PSMD1Q99460 953 aa28.54■■■□□ 2.16
LSM6-203ENST00000503982 SCN4AP35499 1836 aa28.53■■■□□ 2.16
LSM6-203ENST00000503982 ZNF541Q9H0D2 1346 aa28.53■■■□□ 2.16
LSM6-203ENST00000503982 ZNF853P0CG23 659 aa28.53■■■□□ 2.16
LSM6-203ENST00000503982 SLC10A5Q5PT55 438 aa28.53■■■□□ 2.16
LSM6-203ENST00000503982 GRIPAP1Q4V328 841 aa28.52■■■□□ 2.16
LSM6-203ENST00000503982 ABCC4O15439 1325 aa28.51■■■□□ 2.15
LSM6-203ENST00000503982 ATP5J2-PTCD1G3V325 749 aa28.51■■■□□ 2.15
LSM6-203ENST00000503982 GOLGA2Q08379 1002 aa28.51■■■□□ 2.15
LSM6-203ENST00000503982 DDX46Q7L014 1031 aaKnown RBP28.51■■■□□ 2.15
LSM6-203ENST00000503982 RIC3Q7Z5B4 369 aa28.51■■■□□ 2.15
LSM6-203ENST00000503982 LARGE2Q8N3Y3 721 aa28.51■■■□□ 2.15
LSM6-203ENST00000503982 MRS2Q9HD23 443 aa28.51■■■□□ 2.15
LSM6-203ENST00000503982 EIF6P56537 245 aaKnown RBP28.5■■■□□ 2.15
LSM6-203ENST00000503982 EAPPQ56P03 285 aaPredicted RBP28.49■■■□□ 2.15
LSM6-203ENST00000503982 GJA3Q9Y6H8 435 aa28.49■■■□□ 2.15
LSM6-203ENST00000503982 TAF1P21675 1872 aa28.49■■■□□ 2.15
LSM6-203ENST00000503982 RTL5Q5HYW3 569 aaPredicted RBP28.48■■■□□ 2.15
LSM6-203ENST00000503982 CHADLQ6NUI6 762 aa28.48■■■□□ 2.15
LSM6-203ENST00000503982 SLC51AQ86UW1 340 aa28.48■■■□□ 2.15
LSM6-203ENST00000503982 DNAJC5GQ8N7S2 189 aa28.47■■■□□ 2.15
LSM6-203ENST00000503982 CLEC11AQ9Y240 323 aa28.47■■■□□ 2.15
LSM6-203ENST00000503982 DDX60Q8IY21 1712 aaKnown RBP28.46■■■□□ 2.15
LSM6-203ENST00000503982 FZD9O00144 591 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 PPIP5K2O43314 1243 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 C8orf58Q8NAV2 365 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 FAM89AQ96GI7 184 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 L3MBTL3Q96JM7 780 aaPredicted RBP28.46■■■□□ 2.15
LSM6-203ENST00000503982 CHMP4AQ9BY43 222 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 PHAXQ9H814 394 aaKnown RBP28.46■■■□□ 2.15
LSM6-203ENST00000503982 HACL1Q9UJ83 578 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 ATP6V0A2Q9Y487 856 aa28.46■■■□□ 2.15
LSM6-203ENST00000503982 SNED1Q8TER0 1413 aa28.45■■■□□ 2.15
LSM6-203ENST00000503982 POTEIP0CG38 1075 aa28.45■■■□□ 2.14
LSM6-203ENST00000503982 POTEJP0CG39 1038 aa28.45■■■□□ 2.14
LSM6-203ENST00000503982 CCDC30Q5VVM6 783 aa28.45■■■□□ 2.14
LSM6-203ENST00000503982 NIM1KQ8IY84 436 aa28.45■■■□□ 2.14
LSM6-203ENST00000503982 KLRG1Q96E93 195 aa28.45■■■□□ 2.14
LSM6-203ENST00000503982 ISCA1Q9BUE6 129 aa28.45■■■□□ 2.14
LSM6-203ENST00000503982 TAF1DQ9H5J8 278 aaPredicted RBP28.45■■■□□ 2.14
LSM6-203ENST00000503982 BBOX1O75936 387 aa28.44■■■□□ 2.14
LSM6-203ENST00000503982 GRAPQ13588 217 aa28.44■■■□□ 2.14
LSM6-203ENST00000503982 DPP8Q6V1X1 898 aaPredicted RBP28.44■■■□□ 2.14
LSM6-203ENST00000503982 SUPT20HQ8NEM7 779 aa28.44■■■□□ 2.14
LSM6-203ENST00000503982 GRAPLQ8TC17 118 aaPredicted RBP28.44■■■□□ 2.14
LSM6-203ENST00000503982 TSR2Q969E8 191 aaKnown RBP28.44■■■□□ 2.14
LSM6-203ENST00000503982 GPC2Q8N158 579 aa28.43■■■□□ 2.14
LSM6-203ENST00000503982 MYD88Q99836 296 aa28.43■■■□□ 2.14
LSM6-203ENST00000503982 LMOD1P29536 600 aaPredicted RBP28.42■■■□□ 2.14
LSM6-203ENST00000503982 AOC3Q16853 763 aa28.42■■■□□ 2.14
LSM6-203ENST00000503982 LDHDQ86WU2 507 aa28.42■■■□□ 2.14
LSM6-203ENST00000503982 MPNDQ8N594 471 aa28.42■■■□□ 2.14
LSM6-203ENST00000503982 SALL2Q9Y467 1007 aaPredicted RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms