RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
PDLIM5-207ENST00000503974 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 SIK1P57059 783 aa11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 CCDC173Q0VFZ6 552 aa11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 CSPP1Q1MSJ5 1256 aa11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 CAMKK2Q96RR4 588 aa11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-207ENST00000503974 HOXB7P09629 217 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 GABPB1Q06547 395 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 BECN1Q14457 450 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 SLC27A3Q5K4L6 730 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 BAG6P46379 1132 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 PROM2Q8N271 834 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 C4BP0C0L5 1744 aa11.67□□□□□ -0.54
PDLIM5-207ENST00000503974 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 GIGYF1O75420 1035 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 NOP2P46087 812 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 HS1BP3Q53T59 392 aa11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 FEZ2Q9UHY8 353 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 ITPK1Q13572 414 aa11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 TXNRD1Q16881 649 aa11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 CALCOCO1Q9P1Z2 691 aa11.66□□□□□ -0.54
PDLIM5-207ENST00000503974 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 KRT24Q2M2I5 525 aa11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 OTUD6BQ8N6M0 293 aa11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 SGSM3Q96HU1 749 aa11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 RBM42Q9BTD8 480 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 LRRC4BQ9NT99 713 aa11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 CCNL1Q9UK58 526 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-207ENST00000503974 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.55
PDLIM5-207ENST00000503974 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 C8orf58Q8NAV2 365 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 BORCS6Q96GS4 357 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 PRAMEF22A3QJZ6 481 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
PDLIM5-207ENST00000503974 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 HMGB2P26583 209 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 MCM4P33991 863 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 TSPYL6Q8N831 410 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 MYRIPQ8NFW9 859 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 ANTXR1Q9H6X2 564 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 TRAK2O60296 914 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 SLFN14P0C7P3 912 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 BSDC1Q9NW68 430 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 USP16Q9Y5T5 823 aa11.63□□□□□ -0.55
PDLIM5-207ENST00000503974 TUBGCP6Q96RT7 1819 aa11.62□□□□□ -0.55
PDLIM5-207ENST00000503974 VAMP4O75379 141 aa11.62□□□□□ -0.55
PDLIM5-207ENST00000503974 DONSONQ9NYP3 566 aa11.62□□□□□ -0.55
PDLIM5-207ENST00000503974 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-207ENST00000503974 CACNA1FO60840 1977 aa11.62□□□□□ -0.55
PDLIM5-207ENST00000503974 ZKSCAN8Q15776 578 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-207ENST00000503974 RC3H1Q5TC82 1133 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-207ENST00000503974 CTR9Q6PD62 1173 aa11.61□□□□□ -0.55
PDLIM5-207ENST00000503974 NBPF5PQ86XG9 351 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-207ENST00000503974 ZNF428Q96B54 188 aa11.61□□□□□ -0.55
PDLIM5-207ENST00000503974 KCNQ4P56696 695 aa11.61□□□□□ -0.55
PDLIM5-207ENST00000503974 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 STARD3NLO95772 234 aa11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 GTF2F1P35269 517 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 CRKLP46109 303 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 BRMS1Q9HCU9 246 aa11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 RBM28Q9NW13 759 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-207ENST00000503974 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 SSR1P43307 286 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 TNNT3P45378 269 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 PDIA6Q15084 440 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 FEZ1Q99689 392 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 CCDC87Q9NVE4 849 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 ELL2O00472 640 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 ZBTB1Q9Y2K1 713 aa11.59□□□□□ -0.55
PDLIM5-207ENST00000503974 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 DHX16O60231 1041 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms