RNA–Protein interactions for RNA: ENST00000503738.5

GPN1-209, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 984 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-209ENST00000503738 CAPNS2Q96L46 248 aa12.82□□□□□ -0.36
GPN1-209ENST00000503738 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
GPN1-209ENST00000503738 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
GPN1-209ENST00000503738 BTBD11A6QL63 1104 aa12.81□□□□□ -0.36
GPN1-209ENST00000503738 TNRC18O15417 2968 aaPredicted RBP12.81□□□□□ -0.36
GPN1-209ENST00000503738 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
GPN1-209ENST00000503738 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
GPN1-209ENST00000503738 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
GPN1-209ENST00000503738 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
GPN1-209ENST00000503738 COL4A5P29400 1685 aa12.8□□□□□ -0.36
GPN1-209ENST00000503738 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
GPN1-209ENST00000503738 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
GPN1-209ENST00000503738 GPR101Q96P66 508 aaPredicted RBP12.8□□□□□ -0.36
GPN1-209ENST00000503738 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
GPN1-209ENST00000503738 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPN1-209ENST00000503738 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
GPN1-209ENST00000503738 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
GPN1-209ENST00000503738 SCNN1DP51172 638 aa12.79□□□□□ -0.36
GPN1-209ENST00000503738 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
GPN1-209ENST00000503738 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
GPN1-209ENST00000503738 BRPF1P55201 1214 aaPredicted RBP12.78□□□□□ -0.36
GPN1-209ENST00000503738 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
GPN1-209ENST00000503738 ERVV-1B6SEH8 477 aa12.77□□□□□ -0.37
GPN1-209ENST00000503738 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
GPN1-209ENST00000503738 CST9Q5W186 159 aa12.77□□□□□ -0.37
GPN1-209ENST00000503738 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
GPN1-209ENST00000503738 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 KCNQ3O43525 872 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 CYP4F22Q6NT55 531 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
GPN1-209ENST00000503738 OLFM4Q6UX06 510 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 ADARB2Q9NS39 739 aaKnown RBP12.76□□□□□ -0.37
GPN1-209ENST00000503738 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
GPN1-209ENST00000503738 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
GPN1-209ENST00000503738 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
GPN1-209ENST00000503738 EPS15P42566 896 aa12.75□□□□□ -0.37
GPN1-209ENST00000503738 SAPCD2Q86UD0 394 aa12.75□□□□□ -0.37
GPN1-209ENST00000503738 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
GPN1-209ENST00000503738 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
GPN1-209ENST00000503738 GPRC5DQ9NZD1 345 aa12.75□□□□□ -0.37
GPN1-209ENST00000503738 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
GPN1-209ENST00000503738 GJA3Q9Y6H8 435 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 AKAP11Q9UKA4 1901 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 LAMB2P55268 1798 aa12.74□□□□□ -0.37
GPN1-209ENST00000503738 DSG3P32926 999 aa12.73□□□□□ -0.37
GPN1-209ENST00000503738 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
GPN1-209ENST00000503738 RTF1Q92541 710 aaKnown RBP12.73□□□□□ -0.37
GPN1-209ENST00000503738 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
GPN1-209ENST00000503738 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
GPN1-209ENST00000503738 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
GPN1-209ENST00000503738 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
GPN1-209ENST00000503738 PRAMEF22A3QJZ6 481 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 PRKAR2BP31323 418 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
GPN1-209ENST00000503738 NOGQ13253 232 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 HLFQ16534 295 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
GPN1-209ENST00000503738 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
GPN1-209ENST00000503738 RTFDC1Q9BY42 306 aaPredicted RBP12.72□□□□□ -0.37
GPN1-209ENST00000503738 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
GPN1-209ENST00000503738 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
GPN1-209ENST00000503738 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.37
GPN1-209ENST00000503738 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
GPN1-209ENST00000503738 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.37
GPN1-209ENST00000503738 SAGE1Q9NXZ1 904 aa12.71□□□□□ -0.37
GPN1-209ENST00000503738 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
GPN1-209ENST00000503738 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 TRAF5O00463 557 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 PPIP5K2O43314 1243 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 AOC2O75106 756 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 CELF2O95319 508 aaKnown RBP12.7□□□□□ -0.38
GPN1-209ENST00000503738 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
GPN1-209ENST00000503738 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
GPN1-209ENST00000503738 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
GPN1-209ENST00000503738 CXCL9Q07325 125 aa12.69□□□□□ -0.38
GPN1-209ENST00000503738 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
GPN1-209ENST00000503738 KIF6Q6ZMV9 814 aa12.69□□□□□ -0.38
GPN1-209ENST00000503738 CDC37L1Q7L3B6 337 aa12.69□□□□□ -0.38
GPN1-209ENST00000503738 ZNF34Q8IZ26 560 aa12.69□□□□□ -0.38
GPN1-209ENST00000503738 PNISRQ8TF01 805 aaKnown RBP12.69□□□□□ -0.38
GPN1-209ENST00000503738 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 NTSR2O95665 410 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 DGKZQ13574 1117 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 TNIP1Q15025 636 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
GPN1-209ENST00000503738 POLR2AP24928 1970 aaKnown RBP12.68□□□□□ -0.38
GPN1-209ENST00000503738 BBOX1O75936 387 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms