RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 APLP1P51693 650 aa25.31■■□□□ 1.64
UBE2D3-215ENST00000503418 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
UBE2D3-215ENST00000503418 FKBP4Q02790 459 aaKnown RBP eCLIP25.3■■□□□ 1.642e-9■■□□□ 12.2
UBE2D3-215ENST00000503418 FSTL1Q12841 308 aa25.3■■□□□ 1.64
UBE2D3-215ENST00000503418 UTP14AQ9BVJ6 771 aaKnown RBP25.3■■□□□ 1.64
UBE2D3-215ENST00000503418 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
UBE2D3-215ENST00000503418 HOXB7P09629 217 aa25.29■■□□□ 1.64
UBE2D3-215ENST00000503418 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
UBE2D3-215ENST00000503418 RTKN2Q8IZC4 609 aa25.29■■□□□ 1.64
UBE2D3-215ENST00000503418 DUSP27Q5VZP5 1158 aa25.28■■□□□ 1.64
UBE2D3-215ENST00000503418 ZNF277Q9NRM2 450 aaPredicted RBP25.28■■□□□ 1.64
UBE2D3-215ENST00000503418 CALD1Q05682 793 aaKnown RBP25.27■■□□□ 1.64
UBE2D3-215ENST00000503418 CCDC184Q52MB2 194 aa25.27■■□□□ 1.64
UBE2D3-215ENST00000503418 SMC1BQ8NDV3 1235 aa25.27■■□□□ 1.64
UBE2D3-215ENST00000503418 RBM17Q96I25 401 aaKnown RBP25.27■■□□□ 1.64
UBE2D3-215ENST00000503418 HOXA10P31260 410 aaPredicted RBP25.26■■□□□ 1.63
UBE2D3-215ENST00000503418 C3orf67Q6ZVT6 689 aa25.26■■□□□ 1.63
UBE2D3-215ENST00000503418 NLRP3Q96P20 1036 aa25.26■■□□□ 1.63
UBE2D3-215ENST00000503418 DBF4Q9UBU7 674 aaPredicted RBP25.26■■□□□ 1.63
UBE2D3-215ENST00000503418 POTECB2RU33 542 aa25.25■■□□□ 1.63
UBE2D3-215ENST00000503418 DDNO94850 711 aaPredicted RBP25.25■■□□□ 1.63
UBE2D3-215ENST00000503418 TCIRG1Q13488 830 aa25.25■■□□□ 1.63
UBE2D3-215ENST00000503418 IFT57Q9NWB7 429 aa25.25■■□□□ 1.63
UBE2D3-215ENST00000503418 ZNF853P0CG23 659 aa25.24■■□□□ 1.63
UBE2D3-215ENST00000503418 GNAI1P63096 354 aa25.24■■□□□ 1.63
UBE2D3-215ENST00000503418 NLRP10Q86W26 655 aa25.24■■□□□ 1.63
UBE2D3-215ENST00000503418 SYNE4Q8N205 404 aa25.24■■□□□ 1.63
UBE2D3-215ENST00000503418 RNF123Q5XPI4 1314 aa25.23■■□□□ 1.63
UBE2D3-215ENST00000503418 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
UBE2D3-215ENST00000503418 CRAMP1Q96RY5 1269 aa25.23■■□□□ 1.63
UBE2D3-215ENST00000503418 LAMB2P55268 1798 aa25.23■■□□□ 1.63
UBE2D3-215ENST00000503418 ZNF316A6NFI3 1004 aaPredicted RBP25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 PPEF1O14829 653 aaPredicted RBP25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 IARSP41252 1262 aaKnown RBP25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 CC2D2BQ6DHV5 1058 aa25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 PLBD2Q8NHP8 589 aa25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 TRMT112Q9UI30 125 aaKnown RBP25.22■■□□□ 1.63
UBE2D3-215ENST00000503418 ELL2O00472 640 aaPredicted RBP25.21■■□□□ 1.63
UBE2D3-215ENST00000503418 SLC10A5Q5PT55 438 aa25.21■■□□□ 1.63
UBE2D3-215ENST00000503418 ANKRD13DQ6ZTN6 518 aa25.21■■□□□ 1.63
UBE2D3-215ENST00000503418 PSMD1Q99460 953 aa25.21■■□□□ 1.63
UBE2D3-215ENST00000503418 HYPKQ9NX55 129 aa25.21■■□□□ 1.63
UBE2D3-215ENST00000503418 SNED1Q8TER0 1413 aa25.2■■□□□ 1.63
UBE2D3-215ENST00000503418 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
UBE2D3-215ENST00000503418 HTRA3P83110 453 aa25.2■■□□□ 1.62
UBE2D3-215ENST00000503418 SH3TC1Q8TE82 1336 aa25.19■■□□□ 1.62
UBE2D3-215ENST00000503418 ZNF541Q9H0D2 1346 aa25.19■■□□□ 1.62
UBE2D3-215ENST00000503418 SLC51AQ86UW1 340 aa25.19■■□□□ 1.62
UBE2D3-215ENST00000503418 ANP32CO43423 234 aa25.18■■□□□ 1.62
UBE2D3-215ENST00000503418 ABCC4O15439 1325 aa25.17■■□□□ 1.62
UBE2D3-215ENST00000503418 TMX4Q9H1E5 349 aaPredicted RBP25.17■■□□□ 1.62
UBE2D3-215ENST00000503418 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
UBE2D3-215ENST00000503418 SCN4AP35499 1836 aa25.16■■□□□ 1.62
UBE2D3-215ENST00000503418 IQCA1LA6NCM1 817 aa25.16■■□□□ 1.62
UBE2D3-215ENST00000503418 ATP5J2-PTCD1G3V325 749 aa25.16■■□□□ 1.62
UBE2D3-215ENST00000503418 GRIPAP1Q4V328 841 aa25.16■■□□□ 1.62
UBE2D3-215ENST00000503418 JDP2Q8WYK2 163 aa25.16■■□□□ 1.62
UBE2D3-215ENST00000503418 DNAJC5GQ8N7S2 189 aa25.15■■□□□ 1.62
UBE2D3-215ENST00000503418 C8orf58Q8NAV2 365 aa25.15■■□□□ 1.62
UBE2D3-215ENST00000503418 L3MBTL3Q96JM7 780 aaPredicted RBP25.15■■□□□ 1.62
UBE2D3-215ENST00000503418 DDX60Q8IY21 1712 aaKnown RBP25.15■■□□□ 1.62
UBE2D3-215ENST00000503418 FZD9O00144 591 aa25.14■■□□□ 1.62
UBE2D3-215ENST00000503418 GOLGA2Q08379 1002 aa25.14■■□□□ 1.62
UBE2D3-215ENST00000503418 RIC3Q7Z5B4 369 aa25.14■■□□□ 1.62
UBE2D3-215ENST00000503418 ISCA1Q9BUE6 129 aa25.14■■□□□ 1.62
UBE2D3-215ENST00000503418 PHAXQ9H814 394 aaKnown RBP25.14■■□□□ 1.62
UBE2D3-215ENST00000503418 TAF1P21675 1872 aa25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 POTEIP0CG38 1075 aa25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 POTEJP0CG39 1038 aa25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 DDX46Q7L014 1031 aaKnown RBP25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 LARGE2Q8N3Y3 721 aa25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 COL4A5P29400 1685 aa25.13■■□□□ 1.61
UBE2D3-215ENST00000503418 TSR2Q969E8 191 aaKnown RBP25.12■■□□□ 1.61
UBE2D3-215ENST00000503418 FAM89AQ96GI7 184 aa25.12■■□□□ 1.61
UBE2D3-215ENST00000503418 EIF6P56537 245 aaKnown RBP25.11■■□□□ 1.61
UBE2D3-215ENST00000503418 RTL5Q5HYW3 569 aaPredicted RBP25.11■■□□□ 1.61
UBE2D3-215ENST00000503418 CHADLQ6NUI6 762 aa25.11■■□□□ 1.61
UBE2D3-215ENST00000503418 TAF1DQ9H5J8 278 aaPredicted RBP25.11■■□□□ 1.61
UBE2D3-215ENST00000503418 BBOX1O75936 387 aa25.1■■□□□ 1.61
UBE2D3-215ENST00000503418 CCDC27Q2M243 656 aa25.1■■□□□ 1.61
UBE2D3-215ENST00000503418 CCDC30Q5VVM6 783 aa25.1■■□□□ 1.61
UBE2D3-215ENST00000503418 WWC1Q8IX03 1113 aa25.1■■□□□ 1.61
UBE2D3-215ENST00000503418 TSPYL6Q8N831 410 aa25.1■■□□□ 1.61
UBE2D3-215ENST00000503418 HACL1Q9UJ83 578 aa25.1■■□□□ 1.61
UBE2D3-215ENST00000503418 PPIP5K2O43314 1243 aa25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 GRAPQ13588 217 aa25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 EAPPQ56P03 285 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 GPC2Q8N158 579 aa25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 GRAPLQ8TC17 118 aaPredicted RBP25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 KLRG1Q96E93 195 aa25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 GJA3Q9Y6H8 435 aa25.09■■□□□ 1.61
UBE2D3-215ENST00000503418 AOC3Q16853 763 aa25.08■■□□□ 1.61
UBE2D3-215ENST00000503418 NIM1KQ8IY84 436 aa25.08■■□□□ 1.61
UBE2D3-215ENST00000503418 MYD88Q99836 296 aa25.08■■□□□ 1.61
UBE2D3-215ENST00000503418 CHMP4AQ9BY43 222 aa25.08■■□□□ 1.61
UBE2D3-215ENST00000503418 DPP8Q6V1X1 898 aaPredicted RBP25.07■■□□□ 1.6
UBE2D3-215ENST00000503418 LDHDQ86WU2 507 aa25.07■■□□□ 1.6
UBE2D3-215ENST00000503418 SP8Q8IXZ3 490 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms