RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
SCLT1-205ENST00000503401 NYXQ9GZU5 481 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 ABCC12Q96J65 1359 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 BCAR3O75815 825 aa21.02■□□□□ 0.96
SCLT1-205ENST00000503401 IGKV5-2P06315 115 aa21.02■□□□□ 0.96
SCLT1-205ENST00000503401 DPEP1P16444 411 aa21.02■□□□□ 0.96
SCLT1-205ENST00000503401 CWF19L2Q2TBE0 894 aaKnown RBP21.01■□□□□ 0.95
SCLT1-205ENST00000503401 RTL5Q5HYW3 569 aaPredicted RBP21.01■□□□□ 0.95
SCLT1-205ENST00000503401 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
SCLT1-205ENST00000503401 TNRC6CQ9HCJ0 1690 aaKnown RBP21.01■□□□□ 0.95
SCLT1-205ENST00000503401 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
SCLT1-205ENST00000503401 IBTKQ9P2D0 1353 aaPredicted RBP21■□□□□ 0.95
SCLT1-205ENST00000503401 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
SCLT1-205ENST00000503401 BRIP1Q9BX63 1249 aa21■□□□□ 0.95
SCLT1-205ENST00000503401 NOB1Q9ULX3 412 aaKnown RBP21■□□□□ 0.95
SCLT1-205ENST00000503401 TGFB2P61812 414 aa21■□□□□ 0.95
SCLT1-205ENST00000503401 TRIM28Q13263 835 aaKnown RBP21■□□□□ 0.95
SCLT1-205ENST00000503401 SLC4A10Q6U841 1118 aa21■□□□□ 0.95
SCLT1-205ENST00000503401 JARID2Q92833 1246 aaPredicted RBP21■□□□□ 0.95
SCLT1-205ENST00000503401 PTPRCP08575 1304 aa20.99■□□□□ 0.95
SCLT1-205ENST00000503401 FAM89AQ96GI7 184 aa20.99■□□□□ 0.95
SCLT1-205ENST00000503401 CWC25Q9NXE8 425 aaPredicted RBP20.99■□□□□ 0.95
SCLT1-205ENST00000503401 BRCA1P38398 1863 aaKnown RBP20.98■□□□□ 0.95
SCLT1-205ENST00000503401 NEURL1BA8MQ27 555 aa20.98■□□□□ 0.95
SCLT1-205ENST00000503401 KCNA3P22001 575 aa20.98■□□□□ 0.95
SCLT1-205ENST00000503401 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
SCLT1-205ENST00000503401 CCDC191Q8NCU4 936 aa20.98■□□□□ 0.95
SCLT1-205ENST00000503401 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
SCLT1-205ENST00000503401 PDE6BP35913 854 aa20.97■□□□□ 0.95
SCLT1-205ENST00000503401 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
SCLT1-205ENST00000503401 SH3TC1Q8TE82 1336 aa20.97■□□□□ 0.95
SCLT1-205ENST00000503401 DLEC1Q9Y238 1755 aa20.97■□□□□ 0.95
SCLT1-205ENST00000503401 BRPF1P55201 1214 aaPredicted RBP20.96■□□□□ 0.95
SCLT1-205ENST00000503401 C3orf67Q6ZVT6 689 aa20.96■□□□□ 0.95
SCLT1-205ENST00000503401 DDX60Q8IY21 1712 aaKnown RBP20.96■□□□□ 0.95
SCLT1-205ENST00000503401 CACNA1SQ13698 1873 aa20.96■□□□□ 0.95
SCLT1-205ENST00000503401 H0YIN7 160 aa20.96■□□□□ 0.95
SCLT1-205ENST00000503401 BEND3Q5T5X7 828 aa20.96■□□□□ 0.95
SCLT1-205ENST00000503401 LINS1Q8NG48 757 aa20.96■□□□□ 0.95
SCLT1-205ENST00000503401 LAMB2P55268 1798 aa20.95■□□□□ 0.95
SCLT1-205ENST00000503401 FRAT1Q92837 279 aaPredicted RBP20.95■□□□□ 0.94
SCLT1-205ENST00000503401 ZBTB38Q8NAP3 1195 aaPredicted RBP20.94■□□□□ 0.94
SCLT1-205ENST00000503401 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
SCLT1-205ENST00000503401 KIF16BQ96L93 1317 aa20.94■□□□□ 0.94
SCLT1-205ENST00000503401 GCKRQ14397 625 aa20.93■□□□□ 0.94
SCLT1-205ENST00000503401 ZNF622Q969S3 477 aaKnown RBP eCLIP20.93■□□□□ 0.941e-6■□□□□ 9.1
SCLT1-205ENST00000503401 IRS4O14654 1257 aaPredicted RBP20.93■□□□□ 0.94
SCLT1-205ENST00000503401 SRGNP10124 158 aa20.93■□□□□ 0.94
SCLT1-205ENST00000503401 YBX3P16989 372 aaKnown RBP eCLIP20.93■□□□□ 0.941e-6■■□□□ 12
SCLT1-205ENST00000503401 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
SCLT1-205ENST00000503401 TNNQ9UQP3 1299 aa20.93■□□□□ 0.94
SCLT1-205ENST00000503401 KLRG2A4D1S0 409 aaPredicted RBP20.92■□□□□ 0.94
SCLT1-205ENST00000503401 PCCAP05165 728 aaPredicted RBP20.92■□□□□ 0.94
SCLT1-205ENST00000503401 GPR162Q16538 588 aa20.92■□□□□ 0.94
SCLT1-205ENST00000503401 SRCIN1Q9C0H9 1055 aa20.92■□□□□ 0.94
SCLT1-205ENST00000503401 PIM2Q9P1W9 311 aa20.92■□□□□ 0.94
SCLT1-205ENST00000503401 RIC1Q4ADV7 1423 aa20.91■□□□□ 0.94
SCLT1-205ENST00000503401 UBE3BQ7Z3V4 1068 aa20.91■□□□□ 0.94
SCLT1-205ENST00000503401 NLRP3Q96P20 1036 aa20.91■□□□□ 0.94
SCLT1-205ENST00000503401 BCS1LQ9Y276 419 aa20.91■□□□□ 0.94
SCLT1-205ENST00000503401 API5Q9BZZ5 524 aaKnown RBP20.9■□□□□ 0.94
SCLT1-205ENST00000503401 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
SCLT1-205ENST00000503401 TAF1P21675 1872 aa20.9■□□□□ 0.94
SCLT1-205ENST00000503401 TRIM27P14373 513 aa20.89■□□□□ 0.94
SCLT1-205ENST00000503401 CRY2Q49AN0 593 aa20.89■□□□□ 0.94
SCLT1-205ENST00000503401 MASTLQ96GX5 879 aa20.89■□□□□ 0.94
SCLT1-205ENST00000503401 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.94
SCLT1-205ENST00000503401 SLX4Q8IY92 1834 aa20.89■□□□□ 0.93
SCLT1-205ENST00000503401 H7C1W4 665 aa20.89■□□□□ 0.93
SCLT1-205ENST00000503401 DALRD3Q5D0E6 543 aaKnown RBP20.89■□□□□ 0.93
SCLT1-205ENST00000503401 ARHGAP45Q92619 1136 aa20.89■□□□□ 0.93
SCLT1-205ENST00000503401 CLUAP1Q96AJ1 413 aa20.89■□□□□ 0.93
SCLT1-205ENST00000503401 MYH3P11055 1940 aa20.88■□□□□ 0.93
SCLT1-205ENST00000503401 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
SCLT1-205ENST00000503401 ALDH1L1O75891 902 aa20.88■□□□□ 0.93
SCLT1-205ENST00000503401 NPR1P16066 1061 aa20.88■□□□□ 0.93
SCLT1-205ENST00000503401 ATF7IPQ6VMQ6 1270 aa20.88■□□□□ 0.93
SCLT1-205ENST00000503401 TTLL6Q8N841 843 aa20.88■□□□□ 0.93
SCLT1-205ENST00000503401 RPGRQ92834 1020 aaKnown RBP20.88■□□□□ 0.93
SCLT1-205ENST00000503401 CASP7P55210 303 aa20.87■□□□□ 0.93
SCLT1-205ENST00000503401 ZKSCAN2Q63HK3 967 aa20.87■□□□□ 0.93
SCLT1-205ENST00000503401 STYK1Q6J9G0 422 aa20.87■□□□□ 0.93
SCLT1-205ENST00000503401 CDHR2Q9BYE9 1310 aa20.87■□□□□ 0.93
SCLT1-205ENST00000503401 ARFGEF1Q9Y6D6 1849 aa20.87■□□□□ 0.93
SCLT1-205ENST00000503401 CCDC85AQ96PX6 553 aaPredicted RBP20.86■□□□□ 0.93
SCLT1-205ENST00000503401 C9orf78Q9NZ63 289 aaPredicted RBP20.86■□□□□ 0.93
SCLT1-205ENST00000503401 ZNF219Q9P2Y4 722 aaPredicted RBP20.86■□□□□ 0.93
SCLT1-205ENST00000503401 GRM8O00222 908 aa20.86■□□□□ 0.93
SCLT1-205ENST00000503401 ABCC4O15439 1325 aa20.85■□□□□ 0.93
SCLT1-205ENST00000503401 PDE8AO60658 829 aa20.85■□□□□ 0.93
SCLT1-205ENST00000503401 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
SCLT1-205ENST00000503401 CNKSR1Q969H4 720 aa20.85■□□□□ 0.93
SCLT1-205ENST00000503401 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
SCLT1-205ENST00000503401 NBPF7P0C2Y1 421 aaPredicted RBP20.84■□□□□ 0.93
SCLT1-205ENST00000503401 CCT4P50991 539 aaKnown RBP20.84■□□□□ 0.93
SCLT1-205ENST00000503401 RBM17Q96I25 401 aaKnown RBP20.84■□□□□ 0.93
SCLT1-205ENST00000503401 COL4A1P02462 1669 aa20.83■□□□□ 0.93
SCLT1-205ENST00000503401 HOXA10P31260 410 aaPredicted RBP20.83■□□□□ 0.93
SCLT1-205ENST00000503401 SF3B3Q15393 1217 aaKnown RBP20.83■□□□□ 0.93
SCLT1-205ENST00000503401 SLC51AQ86UW1 340 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms