RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 KIF6Q6ZMV9 814 aa17.3■□□□□ 0.36
TRIO-205ENST00000503399 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
TRIO-205ENST00000503399 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
TRIO-205ENST00000503399 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
TRIO-205ENST00000503399 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
TRIO-205ENST00000503399 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
TRIO-205ENST00000503399 COL4A5P29400 1685 aa17.29■□□□□ 0.36
TRIO-205ENST00000503399 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
TRIO-205ENST00000503399 NUP98P52948 1817 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 MAP3K15Q6ZN16 1313 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 NEFMP07197 916 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
TRIO-205ENST00000503399 MYL6BP14649 208 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 GRM1Q13255 1194 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
TRIO-205ENST00000503399 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRIO-205ENST00000503399 LTBP1Q14766 1721 aa17.27■□□□□ 0.36
TRIO-205ENST00000503399 ERVV-1B6SEH8 477 aa17.27■□□□□ 0.36
TRIO-205ENST00000503399 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.36
TRIO-205ENST00000503399 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
TRIO-205ENST00000503399 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
TRIO-205ENST00000503399 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
TRIO-205ENST00000503399 PPEF1O14829 653 aaPredicted RBP17.26■□□□□ 0.35
TRIO-205ENST00000503399 EPS15P42566 896 aa17.26■□□□□ 0.35
TRIO-205ENST00000503399 FMR1Q06787 632 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRIO-205ENST00000503399 PNISRQ8TF01 805 aaKnown RBP17.26■□□□□ 0.35
TRIO-205ENST00000503399 RBM17Q96I25 401 aaKnown RBP17.26■□□□□ 0.35
TRIO-205ENST00000503399 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
TRIO-205ENST00000503399 SCNN1DP51172 638 aa17.25■□□□□ 0.35
TRIO-205ENST00000503399 SUSD4Q5VX71 490 aa17.25■□□□□ 0.35
TRIO-205ENST00000503399 NIM1KQ8IY84 436 aa17.25■□□□□ 0.35
TRIO-205ENST00000503399 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
TRIO-205ENST00000503399 ABHD8Q96I13 439 aa17.24■□□□□ 0.35
TRIO-205ENST00000503399 CAPNS2Q96L46 248 aa17.24■□□□□ 0.35
TRIO-205ENST00000503399 BEGAINQ9BUH8 593 aa17.24■□□□□ 0.35
TRIO-205ENST00000503399 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
TRIO-205ENST00000503399 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
TRIO-205ENST00000503399 TRAF5O00463 557 aa17.23■□□□□ 0.35
TRIO-205ENST00000503399 PPIP5K2O43314 1243 aa17.23■□□□□ 0.35
TRIO-205ENST00000503399 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
TRIO-205ENST00000503399 ECE1P42892 770 aa17.23■□□□□ 0.35
TRIO-205ENST00000503399 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
TRIO-205ENST00000503399 GRIPAP1Q4V328 841 aa17.23■□□□□ 0.35
TRIO-205ENST00000503399 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
TRIO-205ENST00000503399 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
TRIO-205ENST00000503399 TMX4Q9H1E5 349 aaPredicted RBP17.23■□□□□ 0.35
TRIO-205ENST00000503399 NTSR2O95665 410 aa17.22■□□□□ 0.35
TRIO-205ENST00000503399 AOC3Q16853 763 aa17.22■□□□□ 0.35
TRIO-205ENST00000503399 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
TRIO-205ENST00000503399 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
TRIO-205ENST00000503399 CRAMP1Q96RY5 1269 aa17.22■□□□□ 0.35
TRIO-205ENST00000503399 TRPM7Q96QT4 1865 aa17.21■□□□□ 0.35
TRIO-205ENST00000503399 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
TRIO-205ENST00000503399 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
TRIO-205ENST00000503399 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
TRIO-205ENST00000503399 ZNF34Q8IZ26 560 aa17.2■□□□□ 0.34
TRIO-205ENST00000503399 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
TRIO-205ENST00000503399 GPR101Q96P66 508 aaPredicted RBP17.2■□□□□ 0.34
TRIO-205ENST00000503399 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
TRIO-205ENST00000503399 CST9Q5W186 159 aa17.19■□□□□ 0.34
TRIO-205ENST00000503399 TSKSQ9UJT2 592 aa17.19■□□□□ 0.34
TRIO-205ENST00000503399 NFE2L2Q16236 605 aa17.18■□□□□ 0.34
TRIO-205ENST00000503399 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
TRIO-205ENST00000503399 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
TRIO-205ENST00000503399 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
TRIO-205ENST00000503399 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
TRIO-205ENST00000503399 TLL2Q9Y6L7 1015 aa17.18■□□□□ 0.34
TRIO-205ENST00000503399 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
TRIO-205ENST00000503399 CCDC85CA6NKD9 419 aa17.17■□□□□ 0.34
TRIO-205ENST00000503399 AOC2O75106 756 aa17.17■□□□□ 0.34
TRIO-205ENST00000503399 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
TRIO-205ENST00000503399 UTP14AQ9BVJ6 771 aaKnown RBP17.17■□□□□ 0.34
TRIO-205ENST00000503399 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
TRIO-205ENST00000503399 ABCC4O15439 1325 aa17.17■□□□□ 0.34
TRIO-205ENST00000503399 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
TRIO-205ENST00000503399 CELF2O95319 508 aaKnown RBP17.16■□□□□ 0.34
TRIO-205ENST00000503399 GMPSP49915 693 aaPredicted RBP17.16■□□□□ 0.34
TRIO-205ENST00000503399 CXCL9Q07325 125 aa17.16■□□□□ 0.34
TRIO-205ENST00000503399 DPP8Q6V1X1 898 aaPredicted RBP17.16■□□□□ 0.34
TRIO-205ENST00000503399 SUPT20HQ8NEM7 779 aa17.16■□□□□ 0.34
TRIO-205ENST00000503399 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
TRIO-205ENST00000503399 ZNF408Q9H9D4 720 aa17.16■□□□□ 0.34
TRIO-205ENST00000503399 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
TRIO-205ENST00000503399 ANXA1P04083 346 aa17.15■□□□□ 0.34
TRIO-205ENST00000503399 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
TRIO-205ENST00000503399 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
TRIO-205ENST00000503399 RAD17O75943 681 aa17.14■□□□□ 0.33
TRIO-205ENST00000503399 CIAPIN1Q6FI81 312 aa17.14■□□□□ 0.33
TRIO-205ENST00000503399 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
TRIO-205ENST00000503399 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
TRIO-205ENST00000503399 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
TRIO-205ENST00000503399 SAPCD2Q86UD0 394 aa17.13■□□□□ 0.33
TRIO-205ENST00000503399 MPNDQ8N594 471 aa17.13■□□□□ 0.33
TRIO-205ENST00000503399 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
TRIO-205ENST00000503399 LAMB2P55268 1798 aa17.12■□□□□ 0.33
TRIO-205ENST00000503399 MAP2K2P36507 400 aa17.12■□□□□ 0.33
TRIO-205ENST00000503399 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
TRIO-205ENST00000503399 PDIA6Q15084 440 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms