RNA–Protein interactions for RNA: ENST00000503326.5

COPB2-203, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-203ENST00000503326 SLC27A3Q5K4L6 730 aa5.67□□□□□ -1.5
COPB2-203ENST00000503326 PRPF38BQ5VTL8 546 aaKnown RBP5.67□□□□□ -1.5
COPB2-203ENST00000503326 RSBN1LQ6PCB5 846 aaPredicted RBP5.67□□□□□ -1.5
COPB2-203ENST00000503326 Q6ZNB5 142 aa5.67□□□□□ -1.5
COPB2-203ENST00000503326 NUDT16Q96DE0 195 aaKnown RBP5.67□□□□□ -1.5
COPB2-203ENST00000503326 ABHD8Q96I13 439 aa5.67□□□□□ -1.5
COPB2-203ENST00000503326 LIMD1Q9UGP4 676 aa5.67□□□□□ -1.5
COPB2-203ENST00000503326 TRAK1Q9UPV9 953 aa5.67□□□□□ -1.5
COPB2-203ENST00000503326 PCDHGA10Q9Y5H3 936 aa5.67□□□□□ -1.5
COPB2-203ENST00000503326 FAM208AQ9UK61 1670 aaKnown RBP5.66□□□□□ -1.5
COPB2-203ENST00000503326 GOLGA8CPA6NN73 597 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 AP1G2O75843 785 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 SOX11P35716 441 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 MLLT1Q03111 559 aaPredicted RBP5.66□□□□□ -1.5
COPB2-203ENST00000503326 C16orf71Q8IYS4 520 aaPredicted RBP5.66□□□□□ -1.5
COPB2-203ENST00000503326 ZNF454Q8N9F8 522 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 SPIRE2Q8WWL2 714 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 ZBED2Q9BTP6 218 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 CARD10Q9BWT7 1032 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 BCL2L12Q9HB09 334 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 ITGB4P16144 1822 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 CCDC7Q96M83 1385 aa5.66□□□□□ -1.5
COPB2-203ENST00000503326 FOXD4L5Q5VV16 416 aaPredicted RBP5.65□□□□□ -1.5
COPB2-203ENST00000503326 SMIM5Q71RC9 77 aa5.65□□□□□ -1.5
COPB2-203ENST00000503326 NLRP13Q86W25 1043 aa5.65□□□□□ -1.5
COPB2-203ENST00000503326 AMIGO3Q86WK7 504 aa5.65□□□□□ -1.5
COPB2-203ENST00000503326 FOXD4L4Q8WXT5 416 aaPredicted RBP5.65□□□□□ -1.5
COPB2-203ENST00000503326 TBC1D2BQ9UPU7 963 aa5.65□□□□□ -1.5
COPB2-203ENST00000503326 PLEKHG2Q9H7P9 1386 aa5.65□□□□□ -1.51
COPB2-203ENST00000503326 PDE4DIPQ5VU43 2346 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 LOC105371045A0A1W2PR82 267 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 HMGB1P09429 215 aaKnown RBP5.64□□□□□ -1.51
COPB2-203ENST00000503326 USP17L8P0C7I0 530 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 CD46P15529 392 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 PRSS12P56730 875 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 USP46P62068 366 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 C6orf132Q5T0Z8 1188 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 HDGFL1Q5TGJ6 251 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 MRPL50Q8N5N7 158 aaKnown RBP5.64□□□□□ -1.51
COPB2-203ENST00000503326 TTC13Q8NBP0 860 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 PNMA1Q8ND90 353 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 SMC1BQ8NDV3 1235 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 RRAGCQ9HB90 399 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 PRDM10Q9NQV6 1147 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 C4AP0C0L4 1744 aa5.64□□□□□ -1.51
COPB2-203ENST00000503326 MAP2P11137 1827 aaKnown RBP5.64□□□□□ -1.51
COPB2-203ENST00000503326 THSD7BQ9C0I4 1608 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 POM121CA8CG34 1229 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 LILRB3O75022 631 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 RGS19P49795 217 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 FOSBP53539 338 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 SND1Q7KZF4 910 aaKnown RBP eCLIP5.63□□□□□ -1.51
COPB2-203ENST00000503326 ZDHHC16Q969W1 377 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 ZBTB3Q9H5J0 574 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 MKRN1Q9UHC7 482 aaKnown RBP5.63□□□□□ -1.51
COPB2-203ENST00000503326 CCNL1Q9UK58 526 aaPredicted RBP5.63□□□□□ -1.51
COPB2-203ENST00000503326 ANKRD36BQ8N2N9 1353 aa5.63□□□□□ -1.51
COPB2-203ENST00000503326 LTBP1Q14766 1721 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 MON2Q7Z3U7 1717 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 LCE2BO14633 110 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 PTPREP23469 700 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 CSPP1Q1MSJ5 1256 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 C9orf131Q5VYM1 1079 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 ARHGEF25Q86VW2 580 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 HELBQ8NG08 1087 aaPredicted RBP5.62□□□□□ -1.51
COPB2-203ENST00000503326 NLRP7Q8WX94 980 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 CDK19Q9BWU1 502 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 PPP1R12CQ9BZL4 782 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 BCS1LQ9Y276 419 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 DLEC1Q9Y238 1755 aa5.62□□□□□ -1.51
COPB2-203ENST00000503326 CCDC85CA6NKD9 419 aa5.61□□□□□ -1.51
COPB2-203ENST00000503326 ITGBL1O95965 494 aaPredicted RBP5.61□□□□□ -1.51
COPB2-203ENST00000503326 IL2RBP14784 551 aa5.61□□□□□ -1.51
COPB2-203ENST00000503326 LBX1P52954 281 aa5.61□□□□□ -1.51
COPB2-203ENST00000503326 ARHGAP27Q6ZUM4 889 aa5.61□□□□□ -1.51
COPB2-203ENST00000503326 KDM2BQ8NHM5 1336 aa5.61□□□□□ -1.51
COPB2-203ENST00000503326 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
COPB2-203ENST00000503326 DICER1Q9UPY3 1922 aaKnown RBP5.61□□□□□ -1.51
COPB2-203ENST00000503326 CNTNAP1P78357 1384 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.6□□□□□ -1.51
COPB2-203ENST00000503326 A0A0G2JLW4 131 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 RCCD1A6NED2 376 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 NBPF26B4DH59 902 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 RFX1P22670 979 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 DNAJB2P25686 324 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 CTCFP49711 727 aaPredicted RBP5.6□□□□□ -1.51
COPB2-203ENST00000503326 CDCA7LQ96GN5 454 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 VRTNQ9H8Y1 702 aa5.6□□□□□ -1.51
COPB2-203ENST00000503326 COL5A3P25940 1745 aaPredicted RBP5.6□□□□□ -1.51
COPB2-203ENST00000503326 MEGF6O75095 1541 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 KDM6AO15550 1401 aaPredicted RBP5.59□□□□□ -1.51
COPB2-203ENST00000503326 MOXD2PA6NHM9 499 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 DDX11L8A8MPP1 907 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 ATG7O95352 703 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 HSPA8P11142 646 aaKnown RBP5.59□□□□□ -1.51
COPB2-203ENST00000503326 ERCC3P19447 782 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 SLC4A3P48751 1232 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 DDX54Q8TDD1 881 aaKnown RBP5.59□□□□□ -1.51
COPB2-203ENST00000503326 ADAM33Q9BZ11 813 aa5.59□□□□□ -1.51
COPB2-203ENST00000503326 RNF181Q9P0P0 153 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms