RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
SCLT1-204ENST00000503215 APLP1P51693 650 aa21.21■□□□□ 0.99
SCLT1-204ENST00000503215 IBTKQ9P2D0 1353 aaPredicted RBP21.2■□□□□ 0.98
SCLT1-204ENST00000503215 DICER1Q9UPY3 1922 aaKnown RBP21.2■□□□□ 0.98
SCLT1-204ENST00000503215 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
SCLT1-204ENST00000503215 FKBP4Q02790 459 aaKnown RBP eCLIP21.2■□□□□ 0.98
SCLT1-204ENST00000503215 FSTL1Q12841 308 aa21.2■□□□□ 0.98
SCLT1-204ENST00000503215 HDGFL1Q5TGJ6 251 aa21.2■□□□□ 0.98
SCLT1-204ENST00000503215 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
SCLT1-204ENST00000503215 DPY19L2Q6NUT2 758 aa21.2■□□□□ 0.98
SCLT1-204ENST00000503215 PPP1R42Q7Z4L9 355 aa21.2■□□□□ 0.98
SCLT1-204ENST00000503215 DNAJC5GQ8N7S2 189 aa21.2■□□□□ 0.98
SCLT1-204ENST00000503215 UTP14AQ9BVJ6 771 aaKnown RBP21.2■□□□□ 0.98
SCLT1-204ENST00000503215 PARP10Q53GL7 1025 aa21.19■□□□□ 0.98
SCLT1-204ENST00000503215 NLRP10Q86W26 655 aa21.19■□□□□ 0.98
SCLT1-204ENST00000503215 RPGRQ92834 1020 aaKnown RBP21.19■□□□□ 0.98
SCLT1-204ENST00000503215 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
SCLT1-204ENST00000503215 TCIRG1Q13488 830 aa21.18■□□□□ 0.98
SCLT1-204ENST00000503215 RTKN2Q8IZC4 609 aa21.18■□□□□ 0.98
SCLT1-204ENST00000503215 SNED1Q8TER0 1413 aa21.17■□□□□ 0.98
SCLT1-204ENST00000503215 SLC10A5Q5PT55 438 aa21.17■□□□□ 0.98
SCLT1-204ENST00000503215 SMC1BQ8NDV3 1235 aa21.17■□□□□ 0.98
SCLT1-204ENST00000503215 RIC1Q4ADV7 1423 aa21.16■□□□□ 0.98
SCLT1-204ENST00000503215 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
SCLT1-204ENST00000503215 HCLS1P14317 486 aaPredicted RBP21.16■□□□□ 0.98
SCLT1-204ENST00000503215 CRAMP1Q96RY5 1269 aa21.16■□□□□ 0.98
SCLT1-204ENST00000503215 ZNF541Q9H0D2 1346 aa21.16■□□□□ 0.98
SCLT1-204ENST00000503215 HOXB7P09629 217 aa21.15■□□□□ 0.98
SCLT1-204ENST00000503215 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
SCLT1-204ENST00000503215 RBM17Q96I25 401 aaKnown RBP21.15■□□□□ 0.98
SCLT1-204ENST00000503215 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
SCLT1-204ENST00000503215 WDR90Q96KV7 1748 aa21.15■□□□□ 0.98
SCLT1-204ENST00000503215 POTEIP0CG38 1075 aa21.14■□□□□ 0.98
SCLT1-204ENST00000503215 POTEJP0CG39 1038 aa21.14■□□□□ 0.98
SCLT1-204ENST00000503215 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.98
SCLT1-204ENST00000503215 IFT57Q9NWB7 429 aa21.14■□□□□ 0.98
SCLT1-204ENST00000503215 ATP5J2-PTCD1G3V325 749 aa21.13■□□□□ 0.97
SCLT1-204ENST00000503215 HSP90AB3PQ58FF7 597 aa21.13■□□□□ 0.97
SCLT1-204ENST00000503215 ANKRD13DQ6ZTN6 518 aa21.13■□□□□ 0.97
SCLT1-204ENST00000503215 C8orf58Q8NAV2 365 aa21.13■□□□□ 0.97
SCLT1-204ENST00000503215 PLBD2Q8NHP8 589 aa21.13■□□□□ 0.97
SCLT1-204ENST00000503215 DBF4Q9UBU7 674 aaPredicted RBP21.13■□□□□ 0.97
SCLT1-204ENST00000503215 TRMT112Q9UI30 125 aaKnown RBP21.13■□□□□ 0.97
SCLT1-204ENST00000503215 PPEF1O14829 653 aaPredicted RBP21.12■□□□□ 0.97
SCLT1-204ENST00000503215 COL4A5P29400 1685 aa21.12■□□□□ 0.97
SCLT1-204ENST00000503215 GNAI1P63096 354 aa21.11■□□□□ 0.97
SCLT1-204ENST00000503215 PSMD1Q99460 953 aa21.11■□□□□ 0.97
SCLT1-204ENST00000503215 ISCA1Q9BUE6 129 aa21.11■□□□□ 0.97
SCLT1-204ENST00000503215 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
SCLT1-204ENST00000503215 CC2D2BQ6DHV5 1058 aa21.1■□□□□ 0.97
SCLT1-204ENST00000503215 PHAXQ9H814 394 aaKnown RBP21.1■□□□□ 0.97
SCLT1-204ENST00000503215 HYPKQ9NX55 129 aa21.1■□□□□ 0.97
SCLT1-204ENST00000503215 ABCC4O15439 1325 aa21.1■□□□□ 0.97
SCLT1-204ENST00000503215 FZD9O00144 591 aa21.1■□□□□ 0.97
SCLT1-204ENST00000503215 TSPYL6Q8N831 410 aa21.1■□□□□ 0.97
SCLT1-204ENST00000503215 L3MBTL3Q96JM7 780 aaPredicted RBP21.1■□□□□ 0.97
SCLT1-204ENST00000503215 ANKRD36CQ5JPF3 1778 aa21.09■□□□□ 0.97
SCLT1-204ENST00000503215 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
SCLT1-204ENST00000503215 FAM89AQ96GI7 184 aa21.09■□□□□ 0.97
SCLT1-204ENST00000503215 ATP6V0A2Q9Y487 856 aa21.09■□□□□ 0.97
SCLT1-204ENST00000503215 CALD1Q05682 793 aaKnown RBP21.08■□□□□ 0.96
SCLT1-204ENST00000503215 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.96
SCLT1-204ENST00000503215 TSR2Q969E8 191 aaKnown RBP21.08■□□□□ 0.96
SCLT1-204ENST00000503215 TAF1DQ9H5J8 278 aaPredicted RBP21.08■□□□□ 0.96
SCLT1-204ENST00000503215 RNF123Q5XPI4 1314 aa21.08■□□□□ 0.96
SCLT1-204ENST00000503215 KLRG1Q96E93 195 aa21.06■□□□□ 0.96
SCLT1-204ENST00000503215 MRS2Q9HD23 443 aa21.06■□□□□ 0.96
SCLT1-204ENST00000503215 LAMB2P55268 1798 aa21.05■□□□□ 0.96
SCLT1-204ENST00000503215 CHADLQ6NUI6 762 aa21.05■□□□□ 0.96
SCLT1-204ENST00000503215 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
SCLT1-204ENST00000503215 LARGE2Q8N3Y3 721 aa21.05■□□□□ 0.96
SCLT1-204ENST00000503215 JDP2Q8WYK2 163 aa21.05■□□□□ 0.96
SCLT1-204ENST00000503215 TAF1P21675 1872 aa21.04■□□□□ 0.96
SCLT1-204ENST00000503215 BBOX1O75936 387 aa21.04■□□□□ 0.96
SCLT1-204ENST00000503215 RIC3Q7Z5B4 369 aa21.04■□□□□ 0.96
SCLT1-204ENST00000503215 IQCA1LA6NCM1 817 aa21.03■□□□□ 0.96
SCLT1-204ENST00000503215 TRIM28Q13263 835 aaKnown RBP21.03■□□□□ 0.96
SCLT1-204ENST00000503215 AOC3Q16853 763 aa21.03■□□□□ 0.96
SCLT1-204ENST00000503215 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
SCLT1-204ENST00000503215 SP8Q8IXZ3 490 aa21.03■□□□□ 0.96
SCLT1-204ENST00000503215 JARID2Q92833 1246 aaPredicted RBP21.03■□□□□ 0.96
SCLT1-204ENST00000503215 GJA3Q9Y6H8 435 aa21.03■□□□□ 0.96
SCLT1-204ENST00000503215 GRAPQ13588 217 aa21.02■□□□□ 0.96
SCLT1-204ENST00000503215 GRIPAP1Q4V328 841 aa21.02■□□□□ 0.96
SCLT1-204ENST00000503215 EAPPQ56P03 285 aaPredicted RBP21.02■□□□□ 0.96
SCLT1-204ENST00000503215 GPC2Q8N158 579 aa21.02■□□□□ 0.96
SCLT1-204ENST00000503215 GRAPLQ8TC17 118 aaPredicted RBP21.02■□□□□ 0.96
SCLT1-204ENST00000503215 HACL1Q9UJ83 578 aa21.02■□□□□ 0.96
SCLT1-204ENST00000503215 COL4A1P02462 1669 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 PPIP5K2O43314 1243 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 ANP32CO43423 234 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 EPHX2P34913 555 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 EIF6P56537 245 aaKnown RBP21.01■□□□□ 0.95
SCLT1-204ENST00000503215 GOLGA2Q08379 1002 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 CELF1Q92879 486 aaKnown RBP21.01■□□□□ 0.95
SCLT1-204ENST00000503215 MYD88Q99836 296 aa21.01■□□□□ 0.95
SCLT1-204ENST00000503215 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
SCLT1-204ENST00000503215 IRS4O14654 1257 aaPredicted RBP21■□□□□ 0.95
SCLT1-204ENST00000503215 SF3B3Q15393 1217 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms