RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 NEXNQ0ZGT2 675 aa22.72■■□□□ 1.23
CCHCR1-216ENST00000502557 CCDC191Q8NCU4 936 aa22.72■■□□□ 1.23
CCHCR1-216ENST00000502557 NUP98P52948 1817 aa22.72■■□□□ 1.23
CCHCR1-216ENST00000502557 RNF123Q5XPI4 1314 aa22.72■■□□□ 1.23
CCHCR1-216ENST00000502557 BRPF1P55201 1214 aaPredicted RBP22.71■■□□□ 1.23
CCHCR1-216ENST00000502557 SYNE4Q8N205 404 aa22.71■■□□□ 1.23
CCHCR1-216ENST00000502557 PTPRCP08575 1304 aa22.71■■□□□ 1.23
CCHCR1-216ENST00000502557 AFDNP55196 1824 aaKnown RBP22.71■■□□□ 1.23
CCHCR1-216ENST00000502557 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
CCHCR1-216ENST00000502557 KLRG2A4D1S0 409 aaPredicted RBP22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 H0YIN7 160 aa22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 CWF19L2Q2TBE0 894 aaKnown RBP22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 SLC10A5Q5PT55 438 aa22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 CWC25Q9NXE8 425 aaPredicted RBP22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 WWC3Q9ULE0 1092 aa22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 PDZRN3Q9UPQ7 1066 aa22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 SH3TC1Q8TE82 1336 aa22.7■■□□□ 1.22
CCHCR1-216ENST00000502557 ARFGEF2Q9Y6D5 1785 aa22.69■■□□□ 1.22
CCHCR1-216ENST00000502557 RIC1Q4ADV7 1423 aa22.69■■□□□ 1.22
CCHCR1-216ENST00000502557 NEURL1BA8MQ27 555 aa22.69■■□□□ 1.22
CCHCR1-216ENST00000502557 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
CCHCR1-216ENST00000502557 BEND3Q5T5X7 828 aa22.68■■□□□ 1.22
CCHCR1-216ENST00000502557 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
CCHCR1-216ENST00000502557 LINS1Q8NG48 757 aa22.68■■□□□ 1.22
CCHCR1-216ENST00000502557 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
CCHCR1-216ENST00000502557 NOB1Q9ULX3 412 aaKnown RBP22.68■■□□□ 1.22
CCHCR1-216ENST00000502557 KIAA1551Q9HCM1 1747 aa22.68■■□□□ 1.22
CCHCR1-216ENST00000502557 BCAR3O75815 825 aa22.67■■□□□ 1.22
CCHCR1-216ENST00000502557 SRGNP10124 158 aa22.67■■□□□ 1.22
CCHCR1-216ENST00000502557 HCLS1P14317 486 aaPredicted RBP22.67■■□□□ 1.22
CCHCR1-216ENST00000502557 YBX3P16989 372 aaKnown RBP eCLIP22.67■■□□□ 1.22
CCHCR1-216ENST00000502557 C3orf67Q6ZVT6 689 aa22.67■■□□□ 1.22
CCHCR1-216ENST00000502557 ZBTB38Q8NAP3 1195 aaPredicted RBP22.67■■□□□ 1.22
CCHCR1-216ENST00000502557 PCCAP05165 728 aaPredicted RBP22.66■■□□□ 1.22
CCHCR1-216ENST00000502557 GPR162Q16538 588 aa22.66■■□□□ 1.22
CCHCR1-216ENST00000502557 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
CCHCR1-216ENST00000502557 ANKRD36CQ5JPF3 1778 aa22.66■■□□□ 1.22
CCHCR1-216ENST00000502557 GCKRQ14397 625 aa22.65■■□□□ 1.22
CCHCR1-216ENST00000502557 CRY2Q49AN0 593 aa22.65■■□□□ 1.22
CCHCR1-216ENST00000502557 SLC4A10Q6U841 1118 aa22.65■■□□□ 1.22
CCHCR1-216ENST00000502557 JARID2Q92833 1246 aaPredicted RBP22.65■■□□□ 1.22
CCHCR1-216ENST00000502557 ZNF622Q969S3 477 aaKnown RBP eCLIP22.65■■□□□ 1.22
CCHCR1-216ENST00000502557 MASTLQ96GX5 879 aa22.65■■□□□ 1.22
CCHCR1-216ENST00000502557 KIF16BQ96L93 1317 aa22.64■■□□□ 1.22
CCHCR1-216ENST00000502557 DALRD3Q5D0E6 543 aaKnown RBP22.64■■□□□ 1.21
CCHCR1-216ENST00000502557 STYK1Q6J9G0 422 aa22.64■■□□□ 1.21
CCHCR1-216ENST00000502557 NLRP3Q96P20 1036 aa22.64■■□□□ 1.21
CCHCR1-216ENST00000502557 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
CCHCR1-216ENST00000502557 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
CCHCR1-216ENST00000502557 IRS4O14654 1257 aaPredicted RBP22.63■■□□□ 1.21
CCHCR1-216ENST00000502557 NPR1P16066 1061 aa22.63■■□□□ 1.21
CCHCR1-216ENST00000502557 ANKRD31Q8N7Z5 1873 aa22.62■■□□□ 1.21
CCHCR1-216ENST00000502557 H7C1W4 665 aa22.62■■□□□ 1.21
CCHCR1-216ENST00000502557 TTLL6Q8N841 843 aa22.62■■□□□ 1.21
CCHCR1-216ENST00000502557 API5Q9BZZ5 524 aaKnown RBP22.62■■□□□ 1.21
CCHCR1-216ENST00000502557 SRCIN1Q9C0H9 1055 aa22.62■■□□□ 1.21
CCHCR1-216ENST00000502557 TNRC6CQ9HCJ0 1690 aaKnown RBP22.62■■□□□ 1.21
CCHCR1-216ENST00000502557 ALDH1L1O75891 902 aa22.61■■□□□ 1.21
CCHCR1-216ENST00000502557 ARHGAP45Q92619 1136 aa22.61■■□□□ 1.21
CCHCR1-216ENST00000502557 N4BP2Q86UW6 1770 aaPredicted RBP22.61■■□□□ 1.21
CCHCR1-216ENST00000502557 CDHR2Q9BYE9 1310 aa22.6■■□□□ 1.21
CCHCR1-216ENST00000502557 HOXA10P31260 410 aaPredicted RBP22.6■■□□□ 1.21
CCHCR1-216ENST00000502557 CASP7P55210 303 aa22.6■■□□□ 1.21
CCHCR1-216ENST00000502557 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
CCHCR1-216ENST00000502557 CNKSR1Q969H4 720 aa22.6■■□□□ 1.21
CCHCR1-216ENST00000502557 UBE3BQ7Z3V4 1068 aa22.59■■□□□ 1.21
CCHCR1-216ENST00000502557 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
CCHCR1-216ENST00000502557 IPO8O15397 1037 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-216ENST00000502557 HSP90B1P14625 803 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-216ENST00000502557 SF3B3Q15393 1217 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-216ENST00000502557 RBM17Q96I25 401 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-216ENST00000502557 COL11A2P13942 1736 aaPredicted RBP22.57■■□□□ 1.2
CCHCR1-216ENST00000502557 GRIN3BO60391 1043 aa22.57■■□□□ 1.2
CCHCR1-216ENST00000502557 PDE8AO60658 829 aa22.57■■□□□ 1.2
CCHCR1-216ENST00000502557 PRPF40BQ6NWY9 871 aaKnown RBP22.57■■□□□ 1.2
CCHCR1-216ENST00000502557 CRAMP1Q96RY5 1269 aa22.57■■□□□ 1.2
CCHCR1-216ENST00000502557 CACNA1FO60840 1977 aa22.57■■□□□ 1.2
CCHCR1-216ENST00000502557 TRIM27P14373 513 aa22.56■■□□□ 1.2
CCHCR1-216ENST00000502557 ALDH1B1P30837 517 aa22.56■■□□□ 1.2
CCHCR1-216ENST00000502557 ATF7IPQ6VMQ6 1270 aa22.56■■□□□ 1.2
CCHCR1-216ENST00000502557 RCAN3Q9UKA8 241 aa22.56■■□□□ 1.2
CCHCR1-216ENST00000502557 TNNQ9UQP3 1299 aa22.56■■□□□ 1.2
CCHCR1-216ENST00000502557 GRM8O00222 908 aa22.55■■□□□ 1.2
CCHCR1-216ENST00000502557 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
CCHCR1-216ENST00000502557 ZKSCAN2Q63HK3 967 aa22.55■■□□□ 1.2
CCHCR1-216ENST00000502557 ABCC4O15439 1325 aa22.55■■□□□ 1.2
CCHCR1-216ENST00000502557 PLA2G12BQ9BX93 195 aa22.54■■□□□ 1.2
CCHCR1-216ENST00000502557 C9orf78Q9NZ63 289 aaPredicted RBP22.54■■□□□ 1.2
CCHCR1-216ENST00000502557 ZNF219Q9P2Y4 722 aaPredicted RBP22.54■■□□□ 1.2
CCHCR1-216ENST00000502557 C21orf2O43822 256 aa22.53■■□□□ 1.2
CCHCR1-216ENST00000502557 CTSWP56202 376 aa22.53■■□□□ 1.2
CCHCR1-216ENST00000502557 DDX46Q7L014 1031 aaKnown RBP22.53■■□□□ 1.2
CCHCR1-216ENST00000502557 C7orf43Q8WVR3 580 aa22.53■■□□□ 1.2
CCHCR1-216ENST00000502557 UTYO14607 1347 aa22.53■■□□□ 1.2
CCHCR1-216ENST00000502557 INTS3Q68E01 1043 aaKnown RBP22.52■■□□□ 1.2
CCHCR1-216ENST00000502557 DLEC1Q9Y238 1755 aa22.52■■□□□ 1.2
CCHCR1-216ENST00000502557 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
CCHCR1-216ENST00000502557 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
CCHCR1-216ENST00000502557 ARHGAP27Q6ZUM4 889 aa22.51■■□□□ 1.19
CCHCR1-216ENST00000502557 TTLL11Q8NHH1 800 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms