RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 XPCQ01831 940 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 CBLBQ13191 982 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 RTN1Q16799 776 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 COX20Q5RI15 118 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 GORABQ5T7V8 394 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 TGIF2Q9GZN2 237 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 CCSER2Q9H7U1 834 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 FAM13BQ9NYF5 915 aa5.92□□□□□ -1.46
HMGB1P21-201ENST00000502313 NPR3P17342 541 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 NOS2P35228 1153 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 CENPCQ03188 943 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 RBL2Q08999 1139 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 TEAD4Q15561 434 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 ALDH16A1Q8IZ83 802 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 RHBDD1Q8TEB9 315 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 RNF34Q969K3 372 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 L3MBTL2Q969R5 705 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 ITPKCQ96DU7 683 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 MYO19Q96H55 970 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 AGBL1Q96MI9 1066 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 PRKD2Q9BZL6 878 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 SAP130Q9H0E3 1048 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 NEUROD4Q9HD90 331 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 POLMQ9NP87 494 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 NLRP2Q9NX02 1062 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 DMGDHQ9UI17 866 aaKnown RBP5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 HCN4Q9Y3Q4 1203 aa5.91□□□□□ -1.46
HMGB1P21-201ENST00000502313 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 IBSPP21815 317 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 ANAPC15P60006 121 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 FANCCQ00597 558 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 PLCB3Q01970 1234 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 DGKZQ13574 1117 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 C11orf91Q3C1V1 193 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 CCDC181Q5TID7 509 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 TMC7Q7Z402 723 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 RHPN1Q8TCX5 695 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 AIDAQ96BJ3 306 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 PHACTR1Q9C0D0 580 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 ZNF395Q9H8N7 513 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 QTRT2Q9H974 415 aaKnown RBP5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 PARP3Q9Y6F1 533 aa5.9□□□□□ -1.46
HMGB1P21-201ENST00000502313 EML1O00423 815 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 NEFLP07196 543 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 PLA2G4AP47712 749 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 HIRAP54198 1017 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 DNM1Q05193 864 aaKnown RBP5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZNF746Q6NUN9 644 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 BICDL1Q6ZP65 573 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 Q6ZVU0 165 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 PPARGC1BQ86YN6 1023 aaKnown RBP5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 ARMC5Q96C12 935 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 GMLQ99445 158 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZFAND3Q9H8U3 227 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 CHPF2Q9P2E5 772 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 PARP2Q9UGN5 583 aa5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 NOP58Q9Y2X3 529 aaKnown RBP5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 V9GY48 417 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P21-201ENST00000502313 TNFRSF10AO00220 468 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 RPLP1P05386 114 aaKnown RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 LDHBP07195 334 aaKnown RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZAP70P43403 619 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 EHHADHQ08426 723 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 BMS1Q14692 1282 aaKnown RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 DUSP9Q99956 384 aaKnown RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 TSEN34Q9BSV6 310 aaKnown RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 CCDC87Q9NVE4 849 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 MRPL42Q9Y6G3 142 aaKnown RBP5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 FGD5Q6ZNL6 1462 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 RAD54L2Q9Y4B4 1467 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
HMGB1P21-201ENST00000502313 A0A0G2JS52 829 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 TNFRSF10BO14763 440 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 TREHO43280 583 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 MZF1P28698 734 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 GPC1P35052 558 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 C8orf34Q49A92 452 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 C1orf53Q5VUE5 145 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 EDEM1Q92611 657 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 EMID1Q96A84 441 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 FHDC1Q9C0D6 1143 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 OSBPL2Q9H1P3 480 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 KLK14Q9P0G3 267 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 GJA3Q9Y6H8 435 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 USP3Q9Y6I4 520 aa5.87□□□□□ -1.47
HMGB1P21-201ENST00000502313 EIF4G3O43432 1585 aaKnown RBP5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 ABCA10Q8WWZ4 1543 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 AQRO60306 1485 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 J3QL48 77 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 FZD6O60353 706 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 PRPF40AO75400 957 aaKnown RBP5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 TIMP2P16035 220 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 ZNF76P36508 570 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 PSMD2Q13200 908 aa5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 GNL2Q13823 731 aaKnown RBP5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 NBPF10Q6P3W6 841 aaKnown RBP5.86□□□□□ -1.47
HMGB1P21-201ENST00000502313 ATCAYQ86WG3 371 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms