RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 ESF1Q9H501 851 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 PRKRIP1Q9H875 184 aaPredicted RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 MIS18AQ9NYP9 233 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 OPHN1O60890 802 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.47□□□□□ -1.533e-24■□□□□ 8.4
NEAT1-202ENST00000501122 DRC3Q9H069 523 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 ROCK1Q13464 1354 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 MAFGO15525 162 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 NMIQ13287 307 aaPredicted RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC47Q96A33 483 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 EXOC4Q96A65 974 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 SPATA17Q96L03 361 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 NAP1L4Q99733 375 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 THEGQ9P2T0 379 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 SETDB1Q15047 1291 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 EP400NLQ6ZTU2 488 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 ZBTB16Q05516 673 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 DZIP1LQ8IYY4 767 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 STMN4Q9H169 189 aaPredicted RBP5.46□□□□□ -1.53
NEAT1-202ENST00000501122 STK10O94804 968 aaKnown RBP5.46□□□□□ -1.53
NEAT1-202ENST00000501122 SASH1O94885 1247 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 MAP3K9P80192 1104 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 HELLSQ9NRZ9 838 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.46□□□□□ -1.532e-63■□□□□ 8.1
NEAT1-202ENST00000501122 BICD1Q96G01 975 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 STMN1P16949 149 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 PPP2R3AQ06190 1150 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 CUL3Q13618 768 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 NLRP13Q86W25 1043 aa5.46□□□□□ -1.53
NEAT1-202ENST00000501122 GOLGA6BA6NDN3 693 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 KRT75O95678 551 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 KIF5AQ12840 1032 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 GCFC2P16383 781 aaKnown RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 OAS2P29728 719 aaKnown RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 TAF4BQ92750 862 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 CDC45O75419 566 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 SEPT8Q92599 483 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 RILPL2Q969X0 211 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 NAIF1Q69YI7 327 aaPredicted RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 EIF3CLB5ME19 914 aaKnown RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 EIF3CQ99613 913 aaKnown RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 ZNF189O75820 626 aaPredicted RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 PIP4K2AP48426 406 aaPredicted RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 ALS2CR12Q96Q35 445 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 NUB1Q9Y5A7 615 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 ETAA1Q9NY74 926 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 CTAGE9A4FU28 777 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 C17orf50Q8WW18 174 aa5.46□□□□□ -1.54
NEAT1-202ENST00000501122 GPR101Q96P66 508 aaPredicted RBP5.46□□□□□ -1.54
NEAT1-202ENST00000501122 TMED10P49755 219 aaKnown RBP5.45□□□□□ -1.54
NEAT1-202ENST00000501122 CCDC155Q8N6L0 562 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 BATF3Q9NR55 127 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 SERPINA10Q9UK55 444 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ZKSCAN2Q63HK3 967 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ANO10Q9NW15 660 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 USO1O60763 962 aaKnown RBP5.45□□□□□ -1.54
NEAT1-202ENST00000501122 STAG1Q8WVM7 1258 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 RUFY2Q8WXA3 655 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ATP8B1O43520 1251 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 VCAM1P19320 739 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 CPLX2Q6PUV4 134 aaKnown RBP5.45□□□□□ -1.54
NEAT1-202ENST00000501122 TRIM58Q8NG06 486 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 EPSTI1Q96J88 318 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 GOLGA6CA6NDK9 693 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 RASSF10A6NK89 507 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 GOLGA6DP0CG33 693 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 GOLGA6AQ9NYA3 693 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 SCOCQ9UIL1 159 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ATP2B2Q01814 1243 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 CCDC63Q8NA47 563 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ALDH3A1P30838 453 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 MSANTD4Q8NCY6 345 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 SAMD15Q9P1V8 674 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ELF2Q15723 593 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 MIS12Q9H081 205 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 FBXO2Q9UK22 296 aaPredicted RBP5.45□□□□□ -1.54
NEAT1-202ENST00000501122 LRRFIP1Q32MZ4 808 aaKnown RBP5.45□□□□□ -1.54
NEAT1-202ENST00000501122 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 TSPAN9O75954 239 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ISM2Q6H9L7 571 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 L3MBTL2Q969R5 705 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 ATICP31939 592 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 SLC20A2Q08357 652 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 TRAIPQ9BWF2 469 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 CRYMQ14894 314 aa5.45□□□□□ -1.54
NEAT1-202ENST00000501122 DDX23Q9BUQ8 820 aaKnown RBP5.45□□□□□ -1.54
NEAT1-202ENST00000501122 TOP1P11387 765 aaKnown RBP5.44□□□□□ -1.54
NEAT1-202ENST00000501122 TUBB2AQ13885 445 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 MVPQ14764 893 aaKnown RBP5.44□□□□□ -1.54
NEAT1-202ENST00000501122 RAB3IPQ96QF0 476 aaPredicted RBP5.44□□□□□ -1.54
NEAT1-202ENST00000501122 TUBB2BQ9BVA1 445 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 TNIKQ9UKE5 1360 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 CLTAP09496 248 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 PHLDB3Q6NSJ2 640 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 KIF9Q9HAQ2 790 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 IKQ13123 557 aaPredicted RBP5.44□□□□□ -1.54
NEAT1-202ENST00000501122 IGHDP01880 384 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 MAP7D3Q8IWC1 876 aa5.44□□□□□ -1.54
NEAT1-202ENST00000501122 CCDC150Q8NCX0 1101 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms