RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 C4BP0C0L5 1744 aa7.98□□□□□ -1.13
SPTA1-209ENST00000498708 NR1I2O75469 434 aa7.98□□□□□ -1.13
SPTA1-209ENST00000498708 PDE4DIPQ5VU43 2346 aa7.98□□□□□ -1.13
SPTA1-209ENST00000498708 TTC21BQ7Z4L5 1316 aa7.98□□□□□ -1.13
SPTA1-209ENST00000498708 NRG2O14511 850 aaPredicted RBP7.97□□□□□ -1.13
SPTA1-209ENST00000498708 SLC10A3P09131 477 aa7.97□□□□□ -1.13
SPTA1-209ENST00000498708 MMP10P09238 476 aa7.97□□□□□ -1.13
SPTA1-209ENST00000498708 KCNA3P22001 575 aa7.97□□□□□ -1.13
SPTA1-209ENST00000498708 POTECB2RU33 542 aa7.96□□□□□ -1.14
SPTA1-209ENST00000498708 HSPA8P11142 646 aaKnown RBP7.96□□□□□ -1.14
SPTA1-209ENST00000498708 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
SPTA1-209ENST00000498708 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
SPTA1-209ENST00000498708 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
SPTA1-209ENST00000498708 AK7Q96M32 723 aa7.96□□□□□ -1.14
SPTA1-209ENST00000498708 LTN1O94822 1766 aa7.96□□□□□ -1.14
SPTA1-209ENST00000498708 VIRMAQ69YN4 1812 aaKnown RBP7.96□□□□□ -1.14
SPTA1-209ENST00000498708 RNF223E7ERA6 249 aa7.95□□□□□ -1.14
SPTA1-209ENST00000498708 VEGFBP49765 207 aa7.95□□□□□ -1.14
SPTA1-209ENST00000498708 CNTNAP1P78357 1384 aa7.95□□□□□ -1.14
SPTA1-209ENST00000498708 TULP1O00294 542 aaPredicted RBP7.94□□□□□ -1.14
SPTA1-209ENST00000498708 ZCRB1Q8TBF4 217 aaKnown RBP7.94□□□□□ -1.14
SPTA1-209ENST00000498708 DCAF5Q96JK2 942 aa7.94□□□□□ -1.14
SPTA1-209ENST00000498708 DAXXQ9UER7 740 aaPredicted RBP7.94□□□□□ -1.14
SPTA1-209ENST00000498708 PDZRN3Q9UPQ7 1066 aa7.94□□□□□ -1.14
SPTA1-209ENST00000498708 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
SPTA1-209ENST00000498708 CCDC88AQ3V6T2 1871 aa7.94□□□□□ -1.14
SPTA1-209ENST00000498708 RGPD2P0DJD1 1756 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 GLTPD2A6NH11 291 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 GPR37O15354 613 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 ADH1BP00325 375 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 SSFA2P28290 1259 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 SLC19A1P41440 591 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 RASSF7Q02833 373 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 TRAF7Q6Q0C0 670 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 GPIHBP1Q8IV16 184 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 ANKLE1Q8NAG6 615 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 LINC00116Q8NCU8 138 aa7.93□□□□□ -1.14
SPTA1-209ENST00000498708 LTV1Q96GA3 475 aaPredicted RBP7.93□□□□□ -1.14
SPTA1-209ENST00000498708 TLL1O43897 1013 aa7.92□□□□□ -1.14
SPTA1-209ENST00000498708 FECHP22830 423 aa7.92□□□□□ -1.14
SPTA1-209ENST00000498708 DALRD3Q5D0E6 543 aaKnown RBP7.92□□□□□ -1.14
SPTA1-209ENST00000498708 MPRIPQ6WCQ1 1025 aa7.92□□□□□ -1.14
SPTA1-209ENST00000498708 SULF1Q8IWU6 871 aa7.92□□□□□ -1.14
SPTA1-209ENST00000498708 SCUBE3Q8IX30 993 aa7.92□□□□□ -1.14
SPTA1-209ENST00000498708 PIM2Q9P1W9 311 aa7.92□□□□□ -1.14
SPTA1-209ENST00000498708 RDH13Q8NBN7 331 aa7.91□□□□□ -1.14
SPTA1-209ENST00000498708 CCDC87Q9NVE4 849 aa7.91□□□□□ -1.14
SPTA1-209ENST00000498708 TTC21AQ8NDW8 1320 aa7.91□□□□□ -1.14
SPTA1-209ENST00000498708 CENPJQ9HC77 1338 aaPredicted RBP7.91□□□□□ -1.14
SPTA1-209ENST00000498708 MEGF6O75095 1541 aa7.91□□□□□ -1.14
SPTA1-209ENST00000498708 FAM208AQ9UK61 1670 aaKnown RBP7.91□□□□□ -1.14
SPTA1-209ENST00000498708 MAP2P11137 1827 aaKnown RBP7.91□□□□□ -1.14
SPTA1-209ENST00000498708 ITGB4P16144 1822 aa7.91□□□□□ -1.14
SPTA1-209ENST00000498708 C4AP0C0L4 1744 aa7.9□□□□□ -1.14
SPTA1-209ENST00000498708 KDM6AO15550 1401 aaPredicted RBP7.9□□□□□ -1.14
SPTA1-209ENST00000498708 NSD3Q9BZ95 1437 aa7.9□□□□□ -1.14
SPTA1-209ENST00000498708 S1PR4O95977 384 aa7.9□□□□□ -1.14
SPTA1-209ENST00000498708 CHRNA5P30532 468 aa7.9□□□□□ -1.14
SPTA1-209ENST00000498708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.9□□□□□ -1.14
SPTA1-209ENST00000498708 VSIG10Q8N0Z9 540 aa7.9□□□□□ -1.14
SPTA1-209ENST00000498708 SLC6A16Q9GZN6 736 aa7.9□□□□□ -1.14
SPTA1-209ENST00000498708 DDX11L8A8MPP1 907 aa7.89□□□□□ -1.15
SPTA1-209ENST00000498708 TMF1P82094 1093 aa7.89□□□□□ -1.15
SPTA1-209ENST00000498708 ITPK1Q13572 414 aa7.89□□□□□ -1.15
SPTA1-209ENST00000498708 NME9Q86XW9 330 aa7.89□□□□□ -1.15
SPTA1-209ENST00000498708 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
SPTA1-209ENST00000498708 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
SPTA1-209ENST00000498708 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 PASKQ96RG2 1323 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 ZC3H4Q9UPT8 1303 aaKnown RBP7.88□□□□□ -1.15
SPTA1-209ENST00000498708 LMNB1P20700 586 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 HMGB2P26583 209 aaKnown RBP7.88□□□□□ -1.15
SPTA1-209ENST00000498708 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 IP6K1Q92551 441 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 SPSB2Q99619 263 aa7.88□□□□□ -1.15
SPTA1-209ENST00000498708 KTN1Q86UP2 1357 aaKnown RBP7.87□□□□□ -1.15
SPTA1-209ENST00000498708 LOC102724428A0A0B4J2F2 783 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 GYS1P13807 737 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 SIK1P57059 783 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 PUS10Q3MIT2 529 aaKnown RBP7.87□□□□□ -1.15
SPTA1-209ENST00000498708 SPRYD7Q5W111 196 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 ZNF598Q86UK7 904 aaKnown RBP7.87□□□□□ -1.15
SPTA1-209ENST00000498708 PIGBQ92521 554 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 SMARCC1Q92922 1105 aaPredicted RBP7.87□□□□□ -1.15
SPTA1-209ENST00000498708 L3MBTL2Q969R5 705 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 MCOLN1Q9GZU1 580 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 PARP3Q9Y6F1 533 aa7.87□□□□□ -1.15
SPTA1-209ENST00000498708 MON2Q7Z3U7 1717 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 CASP8AP2Q9UKL3 1982 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 TMEM88BA6NKF7 163 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 FBLN1P23142 703 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 GCGRP47871 477 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 MAP2K1Q02750 393 aaPredicted RBP7.86□□□□□ -1.15
SPTA1-209ENST00000498708 FUT2Q10981 343 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 MORN1Q5T089 497 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 TRAPPC3LQ5T215 181 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 USHBP1Q8N6Y0 703 aa7.86□□□□□ -1.15
SPTA1-209ENST00000498708 EVC2Q86UK5 1308 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms