RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 SYNE4Q8N205 404 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 DNAJC5GQ8N7S2 189 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDLBP-247ENST00000498595 TRIM35Q9UPQ4 493 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
HDLBP-247ENST00000498595 RNF123Q5XPI4 1314 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 HOXB7P09629 217 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
HDLBP-247ENST00000498595 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
HDLBP-247ENST00000498595 HDGFL1Q5TGJ6 251 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 OLFM4Q6UX06 510 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 XAGE3Q8WTP9 111 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 WDR90Q96KV7 1748 aa18.85■□□□□ 0.61
HDLBP-247ENST00000498595 NUP98P52948 1817 aa18.84■□□□□ 0.61
HDLBP-247ENST00000498595 LRP10Q7Z4F1 713 aa18.84■□□□□ 0.61
HDLBP-247ENST00000498595 KLRG1Q96E93 195 aa18.84■□□□□ 0.61
HDLBP-247ENST00000498595 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
HDLBP-247ENST00000498595 DICER1Q9UPY3 1922 aaKnown RBP18.83■□□□□ 0.6
HDLBP-247ENST00000498595 POTECB2RU33 542 aa18.83■□□□□ 0.6
HDLBP-247ENST00000498595 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
HDLBP-247ENST00000498595 HTRA3P83110 453 aa18.83■□□□□ 0.6
HDLBP-247ENST00000498595 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
HDLBP-247ENST00000498595 PSMD1Q99460 953 aa18.83■□□□□ 0.6
HDLBP-247ENST00000498595 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
HDLBP-247ENST00000498595 CHADLQ6NUI6 762 aa18.82■□□□□ 0.6
HDLBP-247ENST00000498595 CHPF2Q9P2E5 772 aa18.82■□□□□ 0.6
HDLBP-247ENST00000498595 DBF4Q9UBU7 674 aaPredicted RBP18.82■□□□□ 0.6
HDLBP-247ENST00000498595 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
HDLBP-247ENST00000498595 TCIRG1Q13488 830 aa18.81■□□□□ 0.6
HDLBP-247ENST00000498595 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
HDLBP-247ENST00000498595 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
HDLBP-247ENST00000498595 TRMT112Q9UI30 125 aaKnown RBP18.81■□□□□ 0.6
HDLBP-247ENST00000498595 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
HDLBP-247ENST00000498595 NLRP10Q86W26 655 aa18.8■□□□□ 0.6
HDLBP-247ENST00000498595 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
HDLBP-247ENST00000498595 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
HDLBP-247ENST00000498595 SH3TC1Q8TE82 1336 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 ZNF541Q9H0D2 1346 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 APAF1O14727 1248 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-247ENST00000498595 GNAI1P63096 354 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 DUSP27Q5VZP5 1158 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 LDHDQ86WU2 507 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 LARGE2Q8N3Y3 721 aa18.79■□□□□ 0.6
HDLBP-247ENST00000498595 FZD9O00144 591 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 EAPPQ56P03 285 aaPredicted RBP18.78■□□□□ 0.6
HDLBP-247ENST00000498595 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 DDX46Q7L014 1031 aaKnown RBP18.78■□□□□ 0.6
HDLBP-247ENST00000498595 GPC2Q8N158 579 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 PLBD2Q8NHP8 589 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 CHMP4AQ9BY43 222 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 TAF1DQ9H5J8 278 aaPredicted RBP18.78■□□□□ 0.6
HDLBP-247ENST00000498595 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
HDLBP-247ENST00000498595 BBOX1O75936 387 aa18.77■□□□□ 0.6
HDLBP-247ENST00000498595 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
HDLBP-247ENST00000498595 C3orf67Q6ZVT6 689 aa18.77■□□□□ 0.6
HDLBP-247ENST00000498595 PNMA8AQ86V59 439 aaPredicted RBP18.77■□□□□ 0.6
HDLBP-247ENST00000498595 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
HDLBP-247ENST00000498595 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.6
HDLBP-247ENST00000498595 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
HDLBP-247ENST00000498595 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
HDLBP-247ENST00000498595 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
HDLBP-247ENST00000498595 JMYQ8N9B5 988 aa18.76■□□□□ 0.59
HDLBP-247ENST00000498595 GJA3Q9Y6H8 435 aa18.76■□□□□ 0.59
HDLBP-247ENST00000498595 ABCC4O15439 1325 aa18.75■□□□□ 0.59
HDLBP-247ENST00000498595 PPIP5K2O43314 1243 aa18.75■□□□□ 0.59
HDLBP-247ENST00000498595 EPHX2P34913 555 aa18.75■□□□□ 0.59
HDLBP-247ENST00000498595 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
HDLBP-247ENST00000498595 POTEJP0CG39 1038 aa18.74■□□□□ 0.59
HDLBP-247ENST00000498595 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
HDLBP-247ENST00000498595 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
HDLBP-247ENST00000498595 DPP8Q6V1X1 898 aaPredicted RBP18.74■□□□□ 0.59
HDLBP-247ENST00000498595 VPS33BQ9H267 617 aa18.74■□□□□ 0.59
HDLBP-247ENST00000498595 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
HDLBP-247ENST00000498595 ZNF853P0CG23 659 aa18.73■□□□□ 0.59
HDLBP-247ENST00000498595 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
HDLBP-247ENST00000498595 TMC4Q7Z404 712 aa18.73■□□□□ 0.59
HDLBP-247ENST00000498595 RIC3Q7Z5B4 369 aa18.73■□□□□ 0.59
HDLBP-247ENST00000498595 SP8Q8IXZ3 490 aa18.73■□□□□ 0.59
HDLBP-247ENST00000498595 CREBZFQ9NS37 354 aa18.73■□□□□ 0.59
HDLBP-247ENST00000498595 SCN4AP35499 1836 aa18.72■□□□□ 0.59
HDLBP-247ENST00000498595 ELL2O00472 640 aaPredicted RBP18.72■□□□□ 0.59
HDLBP-247ENST00000498595 GRAPQ13588 217 aa18.72■□□□□ 0.59
HDLBP-247ENST00000498595 MPNDQ8N594 471 aa18.72■□□□□ 0.59
HDLBP-247ENST00000498595 GRAPLQ8TC17 118 aaPredicted RBP18.72■□□□□ 0.59
HDLBP-247ENST00000498595 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
HDLBP-247ENST00000498595 ATP5J2-PTCD1G3V325 749 aa18.71■□□□□ 0.59
HDLBP-247ENST00000498595 AOC3Q16853 763 aa18.71■□□□□ 0.59
HDLBP-247ENST00000498595 ISCA1Q9BUE6 129 aa18.71■□□□□ 0.59
HDLBP-247ENST00000498595 CCDC30Q5VVM6 783 aa18.7■□□□□ 0.58
HDLBP-247ENST00000498595 ZNF428Q96B54 188 aa18.7■□□□□ 0.58
HDLBP-247ENST00000498595 FAM89AQ96GI7 184 aa18.7■□□□□ 0.58
HDLBP-247ENST00000498595 DDX58O95786 925 aaKnown RBP18.69■□□□□ 0.58
HDLBP-247ENST00000498595 TRIM28Q13263 835 aaKnown RBP18.69■□□□□ 0.58
HDLBP-247ENST00000498595 RTFDC1Q9BY42 306 aaPredicted RBP18.69■□□□□ 0.58
HDLBP-247ENST00000498595 ZNRF3Q9ULT6 936 aa18.69■□□□□ 0.58
HDLBP-247ENST00000498595 RTL5Q5HYW3 569 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms