RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 DGKGP49619 791 aa7.9□□□□□ -1.14
HMGXB4-208ENST00000498325 DOC2BQ14184 412 aa7.9□□□□□ -1.14
HMGXB4-208ENST00000498325 ZMYM1Q5SVZ6 1142 aa7.9□□□□□ -1.14
HMGXB4-208ENST00000498325 EFCAB2Q5VUJ9 269 aa7.9□□□□□ -1.14
HMGXB4-208ENST00000498325 ZNF592Q92610 1267 aa7.9□□□□□ -1.14
HMGXB4-208ENST00000498325 GPBP1L1Q9HC44 474 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-208ENST00000498325 DNMT1P26358 1616 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 RNF17Q9BXT8 1623 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 MLH3Q9UHC1 1453 aa7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 RRBP1Q9P2E9 1410 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 BNIP3LO60238 219 aa7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 C4orf17Q53FE4 359 aa7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 SUPT6HQ7KZ85 1726 aaKnown RBP7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 MROH2AA6NES4 1674 aa7.89□□□□□ -1.15
HMGXB4-208ENST00000498325 EHBP1L1Q8N3D4 1523 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 A2ML1A8K2U0 1454 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 CCNB3Q8WWL7 1395 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 NEURL1BA8MQ27 555 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 ARAFP10398 606 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 RNF135Q8IUD6 432 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 NDFIP2Q9NV92 336 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 HRH3Q9Y5N1 445 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 STRCP1A6NGW2 1772 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 LRRIQ1Q96JM4 1722 aa7.88□□□□□ -1.15
HMGXB4-208ENST00000498325 MYCP01106 439 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-208ENST00000498325 ZEB1P37275 1124 aaPredicted RBP7.87□□□□□ -1.15
HMGXB4-208ENST00000498325 NR1H3Q13133 447 aa7.87□□□□□ -1.15
HMGXB4-208ENST00000498325 XAGE2Q96GT9 111 aa7.87□□□□□ -1.15
HMGXB4-208ENST00000498325 NPHP4O75161 1426 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-208ENST00000498325 FAM135BQ49AJ0 1406 aa7.86□□□□□ -1.15
HMGXB4-208ENST00000498325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.86□□□□□ -1.15
HMGXB4-208ENST00000498325 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-208ENST00000498325 FHDC1Q9C0D6 1143 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-208ENST00000498325 CDK13Q14004 1512 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 GATA4P43694 442 aa7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 CHSY3Q70JA7 882 aa7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 ANKLE2Q86XL3 938 aa7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 CRISPLD1Q9H336 500 aa7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 POLR1AO95602 1720 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 NCOA2Q15596 1464 aa7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 CLTCQ00610 1675 aaKnown RBP7.85□□□□□ -1.15
HMGXB4-208ENST00000498325 MED14O60244 1454 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 RXRBP28702 533 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 FAM50AQ14320 339 aaKnown RBP7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 FIGNL1Q6PIW4 674 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 KRTAP1-3Q8IUG1 177 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 RHBDD1Q8TEB9 315 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 LRP6O75581 1613 aa7.84□□□□□ -1.15
HMGXB4-208ENST00000498325 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
HMGXB4-208ENST00000498325 ZNF772Q68DY9 489 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-208ENST00000498325 PCDHGC4Q9Y5F7 938 aa7.83□□□□□ -1.16
HMGXB4-208ENST00000498325 MYOM3Q5VTT5 1437 aa7.83□□□□□ -1.16
HMGXB4-208ENST00000498325 SYNMO15061 1565 aa7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 ADH6P28332 368 aa7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 TROQ12816 1431 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 FGD6Q6ZV73 1430 aa7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 CCER1Q8TC90 406 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 CDCA7Q9BWT1 371 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 ABCC1P33527 1531 aa7.82□□□□□ -1.16
HMGXB4-208ENST00000498325 MIA2Q96PC5 1412 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 ITGAEP38570 1179 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 GGT6Q6P531 493 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 TBC1D9Q6ZT07 1266 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 PLVAPQ9BX97 442 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 ARHGAP5Q13017 1502 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 KIDINS220Q9ULH0 1771 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 JCADQ9P266 1359 aa7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 CDK12Q9NYV4 1490 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-208ENST00000498325 GPR37L1O60883 481 aa7.8□□□□□ -1.16
HMGXB4-208ENST00000498325 SPATA31C1P0DKV0 1188 aa7.8□□□□□ -1.16
HMGXB4-208ENST00000498325 PCMTD1Q96MG8 357 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-208ENST00000498325 DNAAF2Q9NVR5 837 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-208ENST00000498325 RGS12O14924 1447 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 MYO5CQ9NQX4 1742 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 ATXN7O15265 892 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 PLA2G4AP47712 749 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 TLR1Q15399 786 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 RSPO4Q2I0M5 234 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 NLRP8Q86W28 1048 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 FCHSD1Q86WN1 690 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 TRIM11Q96F44 468 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 CCDC85AQ96PX6 553 aaPredicted RBP7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 KLF15Q9UIH9 416 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 TNRQ92752 1358 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 ROBO1Q9Y6N7 1651 aa7.79□□□□□ -1.16
HMGXB4-208ENST00000498325 DEPDC5O75140 1603 aa7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 KIF14Q15058 1648 aa7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 PTPN23Q9H3S7 1636 aa7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 MEX3CQ5U5Q3 659 aaKnown RBP7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 THEMISQ8N1K5 641 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 ETNK1Q9HBU6 452 aa7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 AVENQ9NQS1 362 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 CEP126Q9P2H0 1117 aa7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 IQGAP1P46940 1657 aa7.78□□□□□ -1.16
HMGXB4-208ENST00000498325 XIRP1Q702N8 1843 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms