RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 RPGRQ92834 1020 aaKnown RBP26.54■■□□□ 1.84
LMBR1-219ENST00000498034 DDX21Q9NR30 783 aaKnown RBP eCLIP26.54■■□□□ 1.84
LMBR1-219ENST00000498034 ZNF277Q9NRM2 450 aaPredicted RBP26.54■■□□□ 1.84
LMBR1-219ENST00000498034 RIC1Q4ADV7 1423 aa26.54■■□□□ 1.84
LMBR1-219ENST00000498034 DNAJC5GQ8N7S2 189 aa26.53■■□□□ 1.84
LMBR1-219ENST00000498034 C3orf67Q6ZVT6 689 aa26.52■■□□□ 1.84
LMBR1-219ENST00000498034 APAF1O14727 1248 aa26.51■■□□□ 1.83
LMBR1-219ENST00000498034 HOXA10P31260 410 aaPredicted RBP26.51■■□□□ 1.83
LMBR1-219ENST00000498034 SYNE4Q8N205 404 aa26.51■■□□□ 1.83
LMBR1-219ENST00000498034 CFAP44Q96MT7 982 aa26.51■■□□□ 1.83
LMBR1-219ENST00000498034 UTP14AQ9BVJ6 771 aaKnown RBP26.51■■□□□ 1.83
LMBR1-219ENST00000498034 CHPF2Q9P2E5 772 aa26.51■■□□□ 1.83
LMBR1-219ENST00000498034 HDGFL1Q5TGJ6 251 aa26.49■■□□□ 1.83
LMBR1-219ENST00000498034 RBM17Q96I25 401 aaKnown RBP26.49■■□□□ 1.83
LMBR1-219ENST00000498034 SNED1Q8TER0 1413 aa26.48■■□□□ 1.83
LMBR1-219ENST00000498034 ANKRD36CQ5JPF3 1778 aa26.48■■□□□ 1.83
LMBR1-219ENST00000498034 HSP90AB3PQ58FF7 597 aa26.48■■□□□ 1.83
LMBR1-219ENST00000498034 SLC51AQ86UW1 340 aa26.48■■□□□ 1.83
LMBR1-219ENST00000498034 NLRP3Q96P20 1036 aa26.48■■□□□ 1.83
LMBR1-219ENST00000498034 MBIPQ9NS73 344 aa26.48■■□□□ 1.83
LMBR1-219ENST00000498034 TCERG1O14776 1098 aaKnown RBP26.47■■□□□ 1.83
LMBR1-219ENST00000498034 HOXB7P09629 217 aa26.47■■□□□ 1.83
LMBR1-219ENST00000498034 IARSP41252 1262 aaKnown RBP26.47■■□□□ 1.83
LMBR1-219ENST00000498034 TCIRG1Q13488 830 aa26.47■■□□□ 1.83
LMBR1-219ENST00000498034 SLC10A5Q5PT55 438 aa26.47■■□□□ 1.83
LMBR1-219ENST00000498034 NLRP10Q86W26 655 aa26.47■■□□□ 1.83
LMBR1-219ENST00000498034 CRAMP1Q96RY5 1269 aa26.47■■□□□ 1.83
LMBR1-219ENST00000498034 ZNF853P0CG23 659 aa26.46■■□□□ 1.83
LMBR1-219ENST00000498034 DUSP27Q5VZP5 1158 aa26.46■■□□□ 1.83
LMBR1-219ENST00000498034 ZNF541Q9H0D2 1346 aa26.45■■□□□ 1.83
LMBR1-219ENST00000498034 CCDC184Q52MB2 194 aa26.45■■□□□ 1.82
LMBR1-219ENST00000498034 CC2D2BQ6DHV5 1058 aa26.45■■□□□ 1.82
LMBR1-219ENST00000498034 PSMD1Q99460 953 aa26.45■■□□□ 1.82
LMBR1-219ENST00000498034 PPEF1O14829 653 aaPredicted RBP26.44■■□□□ 1.82
LMBR1-219ENST00000498034 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
LMBR1-219ENST00000498034 DBF4Q9UBU7 674 aaPredicted RBP26.44■■□□□ 1.82
LMBR1-219ENST00000498034 POTEIP0CG38 1075 aa26.43■■□□□ 1.82
LMBR1-219ENST00000498034 POTEJP0CG39 1038 aa26.43■■□□□ 1.82
LMBR1-219ENST00000498034 HCLS1P14317 486 aaPredicted RBP26.43■■□□□ 1.82
LMBR1-219ENST00000498034 RNF123Q5XPI4 1314 aa26.42■■□□□ 1.82
LMBR1-219ENST00000498034 PLBD2Q8NHP8 589 aa26.42■■□□□ 1.82
LMBR1-219ENST00000498034 L3MBTL3Q96JM7 780 aaPredicted RBP26.42■■□□□ 1.82
LMBR1-219ENST00000498034 IFT57Q9NWB7 429 aa26.42■■□□□ 1.82
LMBR1-219ENST00000498034 TRMT112Q9UI30 125 aaKnown RBP26.42■■□□□ 1.82
LMBR1-219ENST00000498034 LAMB2P55268 1798 aa26.41■■□□□ 1.82
LMBR1-219ENST00000498034 FZD9O00144 591 aa26.41■■□□□ 1.82
LMBR1-219ENST00000498034 GNAI1P63096 354 aa26.41■■□□□ 1.82
LMBR1-219ENST00000498034 ANKRD13DQ6ZTN6 518 aa26.41■■□□□ 1.82
LMBR1-219ENST00000498034 KLRG1Q96E93 195 aa26.41■■□□□ 1.82
LMBR1-219ENST00000498034 ELL2O00472 640 aaPredicted RBP26.4■■□□□ 1.82
LMBR1-219ENST00000498034 ZEB1P37275 1124 aaPredicted RBP26.4■■□□□ 1.82
LMBR1-219ENST00000498034 ABCC4O15439 1325 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 SH3TC1Q8TE82 1336 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 COL4A5P29400 1685 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 IQCA1LA6NCM1 817 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 CALD1Q05682 793 aaKnown RBP26.39■■□□□ 1.82
LMBR1-219ENST00000498034 CHADLQ6NUI6 762 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 JDP2Q8WYK2 163 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 HYPKQ9NX55 129 aa26.39■■□□□ 1.82
LMBR1-219ENST00000498034 SCN4AP35499 1836 aa26.39■■□□□ 1.81
LMBR1-219ENST00000498034 GRIPAP1Q4V328 841 aa26.38■■□□□ 1.81
LMBR1-219ENST00000498034 TAF1DQ9H5J8 278 aaPredicted RBP26.38■■□□□ 1.81
LMBR1-219ENST00000498034 ATP5J2-PTCD1G3V325 749 aa26.37■■□□□ 1.81
LMBR1-219ENST00000498034 ISCA1Q9BUE6 129 aa26.37■■□□□ 1.81
LMBR1-219ENST00000498034 ATP6V0A2Q9Y487 856 aa26.37■■□□□ 1.81
LMBR1-219ENST00000498034 LARGE2Q8N3Y3 721 aa26.36■■□□□ 1.81
LMBR1-219ENST00000498034 C8orf58Q8NAV2 365 aa26.35■■□□□ 1.81
LMBR1-219ENST00000498034 TMX4Q9H1E5 349 aaPredicted RBP26.35■■□□□ 1.81
LMBR1-219ENST00000498034 PHAXQ9H814 394 aaKnown RBP26.35■■□□□ 1.81
LMBR1-219ENST00000498034 HACL1Q9UJ83 578 aa26.35■■□□□ 1.81
LMBR1-219ENST00000498034 GPC2Q8N158 579 aa26.34■■□□□ 1.81
LMBR1-219ENST00000498034 FAM89AQ96GI7 184 aa26.34■■□□□ 1.81
LMBR1-219ENST00000498034 BBOX1O75936 387 aa26.33■■□□□ 1.81
LMBR1-219ENST00000498034 EIF6P56537 245 aaKnown RBP26.33■■□□□ 1.81
LMBR1-219ENST00000498034 EAPPQ56P03 285 aaPredicted RBP26.33■■□□□ 1.81
LMBR1-219ENST00000498034 DDX46Q7L014 1031 aaKnown RBP26.33■■□□□ 1.81
LMBR1-219ENST00000498034 LDHDQ86WU2 507 aa26.33■■□□□ 1.81
LMBR1-219ENST00000498034 JMYQ8N9B5 988 aa26.33■■□□□ 1.81
LMBR1-219ENST00000498034 TAF1P21675 1872 aa26.32■■□□□ 1.8
LMBR1-219ENST00000498034 DDX60Q8IY21 1712 aaKnown RBP26.32■■□□□ 1.8
LMBR1-219ENST00000498034 EPHX2P34913 555 aa26.32■■□□□ 1.8
LMBR1-219ENST00000498034 SP8Q8IXZ3 490 aa26.32■■□□□ 1.8
LMBR1-219ENST00000498034 GJA3Q9Y6H8 435 aa26.32■■□□□ 1.8
LMBR1-219ENST00000498034 PPIP5K2O43314 1243 aa26.31■■□□□ 1.8
LMBR1-219ENST00000498034 GRAPQ13588 217 aa26.31■■□□□ 1.8
LMBR1-219ENST00000498034 AOC3Q16853 763 aa26.31■■□□□ 1.8
LMBR1-219ENST00000498034 RTL5Q5HYW3 569 aaPredicted RBP26.31■■□□□ 1.8
LMBR1-219ENST00000498034 RIC3Q7Z5B4 369 aa26.31■■□□□ 1.8
LMBR1-219ENST00000498034 GRAPLQ8TC17 118 aaPredicted RBP26.31■■□□□ 1.8
LMBR1-219ENST00000498034 ZNF316A6NFI3 1004 aaPredicted RBP26.3■■□□□ 1.8
LMBR1-219ENST00000498034 NIM1KQ8IY84 436 aa26.3■■□□□ 1.8
LMBR1-219ENST00000498034 GOLGA2Q08379 1002 aa26.29■■□□□ 1.8
LMBR1-219ENST00000498034 TRIM28Q13263 835 aaKnown RBP26.29■■□□□ 1.8
LMBR1-219ENST00000498034 TSPYL6Q8N831 410 aa26.29■■□□□ 1.8
LMBR1-219ENST00000498034 CLEC11AQ9Y240 323 aa26.29■■□□□ 1.8
LMBR1-219ENST00000498034 DPP8Q6V1X1 898 aaPredicted RBP26.28■■□□□ 1.8
LMBR1-219ENST00000498034 MPNDQ8N594 471 aa26.28■■□□□ 1.8
LMBR1-219ENST00000498034 TSR2Q969E8 191 aaKnown RBP26.28■■□□□ 1.8
LMBR1-219ENST00000498034 RTFDC1Q9BY42 306 aaPredicted RBP26.28■■□□□ 1.8
LMBR1-219ENST00000498034 SUPT20HQ8NEM7 779 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms