RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 ISCA1Q9BUE6 129 aa25.28■■□□□ 1.64
HLA-B-255ENST00000498007 UTP14AQ9BVJ6 771 aaKnown RBP25.28■■□□□ 1.64
HLA-B-255ENST00000498007 DCAF8L1A6NGE4 600 aa25.27■■□□□ 1.64
HLA-B-255ENST00000498007 PDE6BP35913 854 aa25.27■■□□□ 1.64
HLA-B-255ENST00000498007 GPR162Q16538 588 aa25.27■■□□□ 1.64
HLA-B-255ENST00000498007 C2CD5Q86YS7 1000 aa25.27■■□□□ 1.64
HLA-B-255ENST00000498007 MRPL50Q8N5N7 158 aaKnown RBP25.27■■□□□ 1.64
HLA-B-255ENST00000498007 METTL22Q9BUU2 404 aaPredicted RBP25.27■■□□□ 1.64
HLA-B-255ENST00000498007 SMC4Q9NTJ3 1288 aa25.27■■□□□ 1.64
HLA-B-255ENST00000498007 TRMT112Q9UI30 125 aaKnown RBP25.26■■□□□ 1.63
HLA-B-255ENST00000498007 NEXNQ0ZGT2 675 aa25.25■■□□□ 1.63
HLA-B-255ENST00000498007 ALDH1L2Q3SY69 923 aa25.25■■□□□ 1.63
HLA-B-255ENST00000498007 YTHDC1Q96MU7 727 aaKnown RBP25.25■■□□□ 1.63
HLA-B-255ENST00000498007 CACNA1SQ13698 1873 aa25.24■■□□□ 1.63
HLA-B-255ENST00000498007 H0YIN7 160 aa25.24■■□□□ 1.63
HLA-B-255ENST00000498007 KCNA3P22001 575 aa25.24■■□□□ 1.63
HLA-B-255ENST00000498007 RNF123Q5XPI4 1314 aa25.23■■□□□ 1.63
HLA-B-255ENST00000498007 F6X3S4 739 aa25.23■■□□□ 1.63
HLA-B-255ENST00000498007 DNAAF4Q8WXU2 420 aa25.23■■□□□ 1.63
HLA-B-255ENST00000498007 RIC1Q4ADV7 1423 aa25.22■■□□□ 1.63
HLA-B-255ENST00000498007 SH3TC1Q8TE82 1336 aa25.22■■□□□ 1.63
HLA-B-255ENST00000498007 YBX3P16989 372 aaKnown RBP eCLIP25.22■■□□□ 1.63
HLA-B-255ENST00000498007 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
HLA-B-255ENST00000498007 PIM2Q9P1W9 311 aa25.22■■□□□ 1.63
HLA-B-255ENST00000498007 BCS1LQ9Y276 419 aa25.22■■□□□ 1.63
HLA-B-255ENST00000498007 LAMB2P55268 1798 aa25.22■■□□□ 1.63
HLA-B-255ENST00000498007 DDX60Q8IY21 1712 aaKnown RBP25.22■■□□□ 1.63
HLA-B-255ENST00000498007 UTRNP46939 3433 aa25.22■■□□□ 1.63
HLA-B-255ENST00000498007 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
HLA-B-255ENST00000498007 TRIM28Q13263 835 aaKnown RBP25.21■■□□□ 1.63
HLA-B-255ENST00000498007 CWF19L2Q2TBE0 894 aaKnown RBP25.21■■□□□ 1.63
HLA-B-255ENST00000498007 SYNE4Q8N205 404 aa25.21■■□□□ 1.63
HLA-B-255ENST00000498007 ZNF622Q969S3 477 aaKnown RBP eCLIP25.21■■□□□ 1.63
HLA-B-255ENST00000498007 CWC25Q9NXE8 425 aaPredicted RBP25.21■■□□□ 1.63
HLA-B-255ENST00000498007 RARSP54136 660 aaKnown RBP25.2■■□□□ 1.62
HLA-B-255ENST00000498007 CCDC191Q8NCU4 936 aa25.2■■□□□ 1.62
HLA-B-255ENST00000498007 FAM89AQ96GI7 184 aa25.2■■□□□ 1.62
HLA-B-255ENST00000498007 PDZRN3Q9UPQ7 1066 aa25.2■■□□□ 1.62
HLA-B-255ENST00000498007 ARFGEF1Q9Y6D6 1849 aa25.19■■□□□ 1.62
HLA-B-255ENST00000498007 PTPRCP08575 1304 aa25.18■■□□□ 1.62
HLA-B-255ENST00000498007 NEURL1BA8MQ27 555 aa25.18■■□□□ 1.62
HLA-B-255ENST00000498007 SRGNP10124 158 aa25.18■■□□□ 1.62
HLA-B-255ENST00000498007 HCLS1P14317 486 aaPredicted RBP25.18■■□□□ 1.62
HLA-B-255ENST00000498007 DALRD3Q5D0E6 543 aaKnown RBP25.18■■□□□ 1.62
HLA-B-255ENST00000498007 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
HLA-B-255ENST00000498007 C3orf67Q6ZVT6 689 aa25.17■■□□□ 1.62
HLA-B-255ENST00000498007 ZBTB38Q8NAP3 1195 aaPredicted RBP25.16■■□□□ 1.62
HLA-B-255ENST00000498007 JARID2Q92833 1246 aaPredicted RBP25.16■■□□□ 1.62
HLA-B-255ENST00000498007 MASTLQ96GX5 879 aa25.16■■□□□ 1.62
HLA-B-255ENST00000498007 KLRG2A4D1S0 409 aaPredicted RBP25.15■■□□□ 1.62
HLA-B-255ENST00000498007 NPR1P16066 1061 aa25.15■■□□□ 1.62
HLA-B-255ENST00000498007 SLC10A5Q5PT55 438 aa25.15■■□□□ 1.62
HLA-B-255ENST00000498007 STYK1Q6J9G0 422 aa25.15■■□□□ 1.62
HLA-B-255ENST00000498007 TTLL6Q8N841 843 aa25.15■■□□□ 1.62
HLA-B-255ENST00000498007 LINS1Q8NG48 757 aa25.15■■□□□ 1.62
HLA-B-255ENST00000498007 RPGRQ92834 1020 aaKnown RBP25.15■■□□□ 1.62
HLA-B-255ENST00000498007 NLRP3Q96P20 1036 aa25.15■■□□□ 1.62
HLA-B-255ENST00000498007 CRY2Q49AN0 593 aa25.14■■□□□ 1.62
HLA-B-255ENST00000498007 NOB1Q9ULX3 412 aaKnown RBP25.14■■□□□ 1.62
HLA-B-255ENST00000498007 KIF16BQ96L93 1317 aa25.13■■□□□ 1.61
HLA-B-255ENST00000498007 IRS4O14654 1257 aaPredicted RBP25.13■■□□□ 1.61
HLA-B-255ENST00000498007 PCCAP05165 728 aaPredicted RBP25.13■■□□□ 1.61
HLA-B-255ENST00000498007 BEND3Q5T5X7 828 aa25.13■■□□□ 1.61
HLA-B-255ENST00000498007 SLX4Q8IY92 1834 aa25.12■■□□□ 1.61
HLA-B-255ENST00000498007 GRIN3BO60391 1043 aa25.12■■□□□ 1.61
HLA-B-255ENST00000498007 BCAR3O75815 825 aa25.12■■□□□ 1.61
HLA-B-255ENST00000498007 GCKRQ14397 625 aa25.12■■□□□ 1.61
HLA-B-255ENST00000498007 CNKSR1Q969H4 720 aa25.12■■□□□ 1.61
HLA-B-255ENST00000498007 PRPF40BQ6NWY9 871 aaKnown RBP25.11■■□□□ 1.61
HLA-B-255ENST00000498007 ZNF219Q9P2Y4 722 aaPredicted RBP25.11■■□□□ 1.61
HLA-B-255ENST00000498007 BRPF1P55201 1214 aaPredicted RBP25.1■■□□□ 1.61
HLA-B-255ENST00000498007 UBE3BQ7Z3V4 1068 aa25.1■■□□□ 1.61
HLA-B-255ENST00000498007 SRCIN1Q9C0H9 1055 aa25.1■■□□□ 1.61
HLA-B-255ENST00000498007 FRAT1Q92837 279 aaPredicted RBP25.09■■□□□ 1.61
HLA-B-255ENST00000498007 RBM17Q96I25 401 aaKnown RBP25.09■■□□□ 1.61
HLA-B-255ENST00000498007 CDHR2Q9BYE9 1310 aa25.09■■□□□ 1.61
HLA-B-255ENST00000498007 MYH3P11055 1940 aa25.08■■□□□ 1.61
HLA-B-255ENST00000498007 HSP90B1P14625 803 aaKnown RBP25.07■■□□□ 1.6
HLA-B-255ENST00000498007 ALDH1B1P30837 517 aa25.07■■□□□ 1.6
HLA-B-255ENST00000498007 API5Q9BZZ5 524 aaKnown RBP25.07■■□□□ 1.6
HLA-B-255ENST00000498007 C21orf2O43822 256 aa25.06■■□□□ 1.6
HLA-B-255ENST00000498007 ALDH1L1O75891 902 aa25.06■■□□□ 1.6
HLA-B-255ENST00000498007 HOXA10P31260 410 aaPredicted RBP25.06■■□□□ 1.6
HLA-B-255ENST00000498007 ARHGAP27Q6ZUM4 889 aa25.06■■□□□ 1.6
HLA-B-255ENST00000498007 TAF1P21675 1872 aa25.06■■□□□ 1.6
HLA-B-255ENST00000498007 ABCC4O15439 1325 aa25.06■■□□□ 1.6
HLA-B-255ENST00000498007 H7C1W4 665 aa25.05■■□□□ 1.6
HLA-B-255ENST00000498007 PDE8AO60658 829 aa25.05■■□□□ 1.6
HLA-B-255ENST00000498007 CHD4Q14839 1912 aa25.05■■□□□ 1.6
HLA-B-255ENST00000498007 GRM8O00222 908 aa25.04■■□□□ 1.6
HLA-B-255ENST00000498007 DDX46Q7L014 1031 aaKnown RBP25.04■■□□□ 1.6
HLA-B-255ENST00000498007 CCDC85AQ96PX6 553 aaPredicted RBP25.04■■□□□ 1.6
HLA-B-255ENST00000498007 CRAMP1Q96RY5 1269 aa25.04■■□□□ 1.6
HLA-B-255ENST00000498007 C9orf78Q9NZ63 289 aaPredicted RBP25.04■■□□□ 1.6
HLA-B-255ENST00000498007 IPO8O15397 1037 aaKnown RBP25.03■■□□□ 1.6
HLA-B-255ENST00000498007 CASP7P55210 303 aa25.03■■□□□ 1.6
HLA-B-255ENST00000498007 CTSWP56202 376 aa25.03■■□□□ 1.6
HLA-B-255ENST00000498007 SF3B3Q15393 1217 aaKnown RBP25.03■■□□□ 1.6
HLA-B-255ENST00000498007 COL4A1P02462 1669 aa25.02■■□□□ 1.6
HLA-B-255ENST00000498007 PPEF1O14829 653 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms