RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GAS2L2Q8NHY3 880 aa9.04□□□□□ -0.96
SMC4-227ENST00000497984 RBM19Q9Y4C8 960 aaKnown RBP9.04□□□□□ -0.96
SMC4-227ENST00000497984 SPDYE3A6NKU9 549 aa9.03□□□□□ -0.96
SMC4-227ENST00000497984 GATA4P43694 442 aa9.03□□□□□ -0.96
SMC4-227ENST00000497984 BTLAQ7Z6A9 289 aa9.03□□□□□ -0.96
SMC4-227ENST00000497984 PTK7Q13308 1070 aa9.02□□□□□ -0.97
SMC4-227ENST00000497984 CRTC2Q53ET0 693 aaPredicted RBP9.02□□□□□ -0.97
SMC4-227ENST00000497984 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
SMC4-227ENST00000497984 KRTAP4-12Q9BQ66 201 aa9.02□□□□□ -0.97
SMC4-227ENST00000497984 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
SMC4-227ENST00000497984 PRRT3Q5FWE3 981 aa9.01□□□□□ -0.97
SMC4-227ENST00000497984 CHMP7Q8WUX9 453 aaPredicted RBP9.01□□□□□ -0.97
SMC4-227ENST00000497984 BHMTQ93088 406 aa9.01□□□□□ -0.97
SMC4-227ENST00000497984 NGLY1Q96IV0 654 aa9.01□□□□□ -0.97
SMC4-227ENST00000497984 PPP1R12CQ9BZL4 782 aa9.01□□□□□ -0.97
SMC4-227ENST00000497984 DPYDQ12882 1025 aa9□□□□□ -0.97
SMC4-227ENST00000497984 TMEM132AQ24JP5 1023 aa9□□□□□ -0.97
SMC4-227ENST00000497984 IER5Q5VY09 327 aa9□□□□□ -0.97
SMC4-227ENST00000497984 LARP1Q6PKG0 1096 aaKnown RBP9□□□□□ -0.97
SMC4-227ENST00000497984 BCS1LQ9Y276 419 aa9□□□□□ -0.97
SMC4-227ENST00000497984 LGR5O75473 907 aa8.99□□□□□ -0.97
SMC4-227ENST00000497984 HIF1AQ16665 826 aa8.99□□□□□ -0.97
SMC4-227ENST00000497984 RTN1Q16799 776 aa8.99□□□□□ -0.97
SMC4-227ENST00000497984 KRTAP9-9Q9BYP9 154 aa8.99□□□□□ -0.97
SMC4-227ENST00000497984 KRTAP9-4Q9BYQ2 154 aa8.99□□□□□ -0.97
SMC4-227ENST00000497984 DMGDHQ9UI17 866 aaKnown RBP8.99□□□□□ -0.97
SMC4-227ENST00000497984 TGFBR3LH3BV60 316 aa8.98□□□□□ -0.97
SMC4-227ENST00000497984 IGFBP4P22692 258 aa8.98□□□□□ -0.97
SMC4-227ENST00000497984 CALR3Q96L12 384 aaKnown RBP8.98□□□□□ -0.97
SMC4-227ENST00000497984 GSX2Q9BZM3 304 aa8.98□□□□□ -0.97
SMC4-227ENST00000497984 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
SMC4-227ENST00000497984 A6NJR5 290 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L15C9J2P7 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L13C9JLJ4 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L12C9JPN9 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L11C9JVI0 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L21D6R901 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L18D6R9N7 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L22D6RA61 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L17D6RBQ6 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L19D6RCP7 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L20D6RJB6 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 APBA3O96018 575 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 GRNP28799 593 aaKnown RBP8.97□□□□□ -0.97
SMC4-227ENST00000497984 USP17L24Q0WX57 530 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 TRIM28Q13263 835 aaKnown RBP8.97□□□□□ -0.97
SMC4-227ENST00000497984 RSPO4Q2I0M5 234 aaPredicted RBP8.97□□□□□ -0.97
SMC4-227ENST00000497984 ANKMY2Q8IV38 441 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 HINFPQ9BQA5 517 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
SMC4-227ENST00000497984 EFCC1Q9HA90 598 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 SLC6A14Q9UN76 642 aa8.97□□□□□ -0.97
SMC4-227ENST00000497984 NKAPLQ5M9Q1 402 aa8.96□□□□□ -0.98
SMC4-227ENST00000497984 TPSG1Q9NRR2 321 aa8.96□□□□□ -0.98
SMC4-227ENST00000497984 LILRB5O75023 590 aa8.95□□□□□ -0.98
SMC4-227ENST00000497984 GRIK4Q16099 956 aa8.95□□□□□ -0.98
SMC4-227ENST00000497984 ARXQ96QS3 562 aa8.95□□□□□ -0.98
SMC4-227ENST00000497984 NAGPAQ9UK23 515 aa8.95□□□□□ -0.98
SMC4-227ENST00000497984 TBC1D8BQ0IIM8 1120 aa8.94□□□□□ -0.98
SMC4-227ENST00000497984 ILDR2Q71H61 639 aa8.94□□□□□ -0.98
SMC4-227ENST00000497984 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
SMC4-227ENST00000497984 DNAJB12Q9NXW2 375 aaKnown RBP8.94□□□□□ -0.98
SMC4-227ENST00000497984 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.94□□□□□ -0.98
SMC4-227ENST00000497984 LMOD1P29536 600 aaPredicted RBP8.93□□□□□ -0.98
SMC4-227ENST00000497984 CCINQ13939 588 aa8.93□□□□□ -0.98
SMC4-227ENST00000497984 TRAPPC3LQ5T215 181 aa8.93□□□□□ -0.98
SMC4-227ENST00000497984 NACC1Q96RE7 527 aa8.93□□□□□ -0.98
SMC4-227ENST00000497984 IGFLR1Q9H665 355 aa8.93□□□□□ -0.98
SMC4-227ENST00000497984 A0A0A0MRY4 1105 aa8.92□□□□□ -0.98
SMC4-227ENST00000497984 NFKB1P19838 968 aa8.92□□□□□ -0.98
SMC4-227ENST00000497984 INPP5BP32019 993 aa8.92□□□□□ -0.98
SMC4-227ENST00000497984 NUDT8Q8WV74 236 aa8.92□□□□□ -0.98
SMC4-227ENST00000497984 JPH1Q9HDC5 661 aaPredicted RBP8.92□□□□□ -0.98
SMC4-227ENST00000497984 KLK14Q9P0G3 267 aa8.92□□□□□ -0.98
SMC4-227ENST00000497984 SELPP16109 830 aa8.91□□□□□ -0.98
SMC4-227ENST00000497984 WEE1P30291 646 aa8.91□□□□□ -0.98
SMC4-227ENST00000497984 AFF1P51825 1210 aaKnown RBP8.91□□□□□ -0.98
SMC4-227ENST00000497984 PSAPL1Q6NUJ1 521 aa8.91□□□□□ -0.98
SMC4-227ENST00000497984 QTRT2Q9H974 415 aaKnown RBP8.91□□□□□ -0.98
SMC4-227ENST00000497984 IDH3AP50213 366 aa8.9□□□□□ -0.98
SMC4-227ENST00000497984 ADGRE1Q14246 886 aa8.9□□□□□ -0.98
SMC4-227ENST00000497984 CFAP70Q5T0N1 1121 aa8.9□□□□□ -0.98
SMC4-227ENST00000497984 PNMA5Q96PV4 448 aa8.9□□□□□ -0.98
SMC4-227ENST00000497984 C9orf172C9J069 976 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 FOXO3O43524 673 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 DYRK3O43781 588 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 ELNP15502 786 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 DGKZQ13574 1117 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 MBTPS1Q14703 1052 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 MYO19Q96H55 970 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 ZFATQ9P243 1243 aa8.89□□□□□ -0.99
SMC4-227ENST00000497984 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
SMC4-227ENST00000497984 MAP3K6O95382 1288 aa8.88□□□□□ -0.99
SMC4-227ENST00000497984 EPB42P16452 691 aa8.88□□□□□ -0.99
SMC4-227ENST00000497984 FOXD4L6Q3SYB3 417 aaPredicted RBP8.88□□□□□ -0.99
SMC4-227ENST00000497984 FOXD4L3Q6VB84 417 aaPredicted RBP8.88□□□□□ -0.99
SMC4-227ENST00000497984 ZBTB42B2RXF5 422 aa8.87□□□□□ -0.99
SMC4-227ENST00000497984 ZMYM1Q5SVZ6 1142 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms